RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 POGKQ9P215 609 aa19.78■□□□□ 0.76
RBFOX1-212ENST00000550418 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
RBFOX1-212ENST00000550418 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
RBFOX1-212ENST00000550418 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
RBFOX1-212ENST00000550418 SMC4Q9NTJ3 1288 aa19.76■□□□□ 0.75
RBFOX1-212ENST00000550418 BRPF3Q9ULD4 1205 aa19.75■□□□□ 0.75
RBFOX1-212ENST00000550418 NUP155O75694 1391 aa19.75■□□□□ 0.75
RBFOX1-212ENST00000550418 TNNT3P45378 269 aaPredicted RBP19.75■□□□□ 0.75
RBFOX1-212ENST00000550418 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
RBFOX1-212ENST00000550418 PRKCSHP14314 528 aaPredicted RBP19.74■□□□□ 0.75
RBFOX1-212ENST00000550418 CGNL1Q0VF96 1302 aa19.73■□□□□ 0.75
RBFOX1-212ENST00000550418 NAP1L2Q9ULW6 460 aaPredicted RBP19.72■□□□□ 0.75
RBFOX1-212ENST00000550418 ST20-MTHFSA0A0A6YYL1 179 aa19.72■□□□□ 0.75
RBFOX1-212ENST00000550418 CUX1P39880 1505 aa19.72■□□□□ 0.75
RBFOX1-212ENST00000550418 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
RBFOX1-212ENST00000550418 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
RBFOX1-212ENST00000550418 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
RBFOX1-212ENST00000550418 GGT6Q6P531 493 aa19.71■□□□□ 0.75
RBFOX1-212ENST00000550418 KIAA1211Q6ZU35 1233 aa19.71■□□□□ 0.75
RBFOX1-212ENST00000550418 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
RBFOX1-212ENST00000550418 PHF14O94880 888 aa19.7■□□□□ 0.74
RBFOX1-212ENST00000550418 FAM13BQ9NYF5 915 aa19.69■□□□□ 0.74
RBFOX1-212ENST00000550418 TAOK2Q9UL54 1235 aa19.69■□□□□ 0.74
RBFOX1-212ENST00000550418 ST18O60284 1047 aa19.68■□□□□ 0.74
RBFOX1-212ENST00000550418 EFCAB2Q5VUJ9 269 aa19.68■□□□□ 0.74
RBFOX1-212ENST00000550418 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
RBFOX1-212ENST00000550418 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
RBFOX1-212ENST00000550418 SRPK2P78362 688 aaKnown RBP19.67■□□□□ 0.74
RBFOX1-212ENST00000550418 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
RBFOX1-212ENST00000550418 COG6Q9Y2V7 657 aa19.66■□□□□ 0.74
RBFOX1-212ENST00000550418 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
RBFOX1-212ENST00000550418 E9PSI1 815 aa19.65■□□□□ 0.74
RBFOX1-212ENST00000550418 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
RBFOX1-212ENST00000550418 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.64■□□□□ 0.74
RBFOX1-212ENST00000550418 PANK3Q9H999 370 aa19.64■□□□□ 0.73
RBFOX1-212ENST00000550418 CCDC7Q96M83 1385 aa19.64■□□□□ 0.73
RBFOX1-212ENST00000550418 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
RBFOX1-212ENST00000550418 USP47Q96K76 1375 aa19.64■□□□□ 0.73
RBFOX1-212ENST00000550418 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
RBFOX1-212ENST00000550418 MSH5O43196 834 aa19.63■□□□□ 0.73
RBFOX1-212ENST00000550418 MRE11P49959 708 aa19.63■□□□□ 0.73
RBFOX1-212ENST00000550418 CSPP1Q1MSJ5 1256 aa19.62■□□□□ 0.73
RBFOX1-212ENST00000550418 HDGFP51858 240 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-212ENST00000550418 PKNOX2Q96KN3 472 aa19.62■□□□□ 0.73
RBFOX1-212ENST00000550418 CNTLNQ9NXG0 1405 aa19.62■□□□□ 0.73
RBFOX1-212ENST00000550418 FRAT2O75474 233 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-212ENST00000550418 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-212ENST00000550418 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-212ENST00000550418 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
RBFOX1-212ENST00000550418 PTPRGP23470 1445 aa19.6■□□□□ 0.73
RBFOX1-212ENST00000550418 KANK1Q14678 1352 aa19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 NOL8Q76FK4 1167 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 KIF3BO15066 747 aa19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
RBFOX1-212ENST00000550418 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
RBFOX1-212ENST00000550418 TOPBP1Q92547 1522 aa19.58■□□□□ 0.73
RBFOX1-212ENST00000550418 HMMRO75330 724 aa19.58■□□□□ 0.72
RBFOX1-212ENST00000550418 ZKSCAN2Q63HK3 967 aa19.57■□□□□ 0.72
RBFOX1-212ENST00000550418 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
RBFOX1-212ENST00000550418 RRP7AQ9Y3A4 280 aaKnown RBP19.57■□□□□ 0.72
RBFOX1-212ENST00000550418 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
RBFOX1-212ENST00000550418 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
RBFOX1-212ENST00000550418 TRIM6-TRIM34B2RNG4 842 aa19.56■□□□□ 0.72
RBFOX1-212ENST00000550418 APAF1O14727 1248 aa19.56■□□□□ 0.72
RBFOX1-212ENST00000550418 EIF3AQ14152 1382 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-212ENST00000550418 MAP7D2Q96T17 732 aa19.55■□□□□ 0.72
RBFOX1-212ENST00000550418 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
RBFOX1-212ENST00000550418 FGD6Q6ZV73 1430 aa19.54■□□□□ 0.72
RBFOX1-212ENST00000550418 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
RBFOX1-212ENST00000550418 HDGFL2Q7Z4V5 671 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-212ENST00000550418 ZNF771Q7L3S4 317 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-212ENST00000550418 TPM4P67936 248 aa19.52■□□□□ 0.72
RBFOX1-212ENST00000550418 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
RBFOX1-212ENST00000550418 SPAG9O60271 1321 aaKnown RBP19.52■□□□□ 0.71
RBFOX1-212ENST00000550418 C22orf23Q9BZE7 217 aa19.51■□□□□ 0.71
RBFOX1-212ENST00000550418 TRAK2O60296 914 aa19.51■□□□□ 0.71
RBFOX1-212ENST00000550418 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
RBFOX1-212ENST00000550418 TPM2P07951 284 aa19.5■□□□□ 0.71
RBFOX1-212ENST00000550418 MTERF4Q7Z6M4 381 aaKnown RBP19.5■□□□□ 0.71
RBFOX1-212ENST00000550418 R3HCC1Q9Y3T6 440 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-212ENST00000550418 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
RBFOX1-212ENST00000550418 CASKIN1Q8WXD9 1431 aa19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 NASPP49321 788 aaPredicted RBP19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 STK26Q9P289 416 aa19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 ATP6V1DQ9Y5K8 247 aa19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 FOXD4L6Q3SYB3 417 aaPredicted RBP19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 FOXD4L3Q6VB84 417 aaPredicted RBP19.48■□□□□ 0.71
RBFOX1-212ENST00000550418 AKNAQ7Z591 1439 aa19.47■□□□□ 0.71
RBFOX1-212ENST00000550418 UACAQ9BZF9 1416 aa19.47■□□□□ 0.71
RBFOX1-212ENST00000550418 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
RBFOX1-212ENST00000550418 GOLGA6L1Q8N7Z2 621 aa19.47■□□□□ 0.71
RBFOX1-212ENST00000550418 SOX12O15370 315 aa19.46■□□□□ 0.71
RBFOX1-212ENST00000550418 NUCB2P80303 420 aa19.46■□□□□ 0.71
RBFOX1-212ENST00000550418 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-212ENST00000550418 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms