RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
AC138331.1-201ENST00000549993 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.09
AC138331.1-201ENST00000549993 CFDP1Q9UEE9 299 aaPredicted RBP15.58■□□□□ 0.08
AC138331.1-201ENST00000549993 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
AC138331.1-201ENST00000549993 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
AC138331.1-201ENST00000549993 CASKIN1Q8WXD9 1431 aa15.56■□□□□ 0.08
AC138331.1-201ENST00000549993 PLEKHH2Q8IVE3 1493 aa15.56■□□□□ 0.08
AC138331.1-201ENST00000549993 PZPP20742 1482 aa15.55■□□□□ 0.08
AC138331.1-201ENST00000549993 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
AC138331.1-201ENST00000549993 NLRP1Q9C000 1473 aa15.54■□□□□ 0.08
AC138331.1-201ENST00000549993 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
AC138331.1-201ENST00000549993 INO80Q9ULG1 1556 aaPredicted RBP15.53■□□□□ 0.08
AC138331.1-201ENST00000549993 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
AC138331.1-201ENST00000549993 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
AC138331.1-201ENST00000549993 FAM135AQ9P2D6 1515 aa15.53■□□□□ 0.08
AC138331.1-201ENST00000549993 KIF3BO15066 747 aa15.52■□□□□ 0.08
AC138331.1-201ENST00000549993 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
AC138331.1-201ENST00000549993 DEPDC5O75140 1603 aa15.51■□□□□ 0.07
AC138331.1-201ENST00000549993 UGGT1Q9NYU2 1555 aa15.51■□□□□ 0.07
AC138331.1-201ENST00000549993 POLR1AO95602 1720 aaPredicted RBP15.5■□□□□ 0.07
AC138331.1-201ENST00000549993 ZNF644Q9H582 1327 aaPredicted RBP15.49■□□□□ 0.07
AC138331.1-201ENST00000549993 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
AC138331.1-201ENST00000549993 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
AC138331.1-201ENST00000549993 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
AC138331.1-201ENST00000549993 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
AC138331.1-201ENST00000549993 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
AC138331.1-201ENST00000549993 CCNB3Q8WWL7 1395 aa15.48■□□□□ 0.07
AC138331.1-201ENST00000549993 KDM5DQ9BY66 1539 aa15.45■□□□□ 0.06
AC138331.1-201ENST00000549993 LTKP29376 864 aa15.44■□□□□ 0.06
AC138331.1-201ENST00000549993 SYNMO15061 1565 aa15.44■□□□□ 0.06
AC138331.1-201ENST00000549993 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
AC138331.1-201ENST00000549993 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
AC138331.1-201ENST00000549993 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
AC138331.1-201ENST00000549993 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
AC138331.1-201ENST00000549993 RSPH4AQ5TD94 716 aa15.4■□□□□ 0.06
AC138331.1-201ENST00000549993 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
AC138331.1-201ENST00000549993 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
AC138331.1-201ENST00000549993 SCAF11Q99590 1463 aaKnown RBP15.38■□□□□ 0.05
AC138331.1-201ENST00000549993 KCNA6P17658 529 aa15.36■□□□□ 0.05
AC138331.1-201ENST00000549993 JCADQ9P266 1359 aa15.36■□□□□ 0.05
AC138331.1-201ENST00000549993 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
AC138331.1-201ENST00000549993 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
AC138331.1-201ENST00000549993 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
AC138331.1-201ENST00000549993 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
AC138331.1-201ENST00000549993 EID1Q9Y6B2 187 aa15.34■□□□□ 0.05
AC138331.1-201ENST00000549993 ERVK-7P63135 1459 aa15.33■□□□□ 0.05
AC138331.1-201ENST00000549993 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
AC138331.1-201ENST00000549993 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
AC138331.1-201ENST00000549993 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
AC138331.1-201ENST00000549993 SLIT1O75093 1534 aa15.32■□□□□ 0.04
AC138331.1-201ENST00000549993 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
AC138331.1-201ENST00000549993 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
AC138331.1-201ENST00000549993 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
AC138331.1-201ENST00000549993 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
AC138331.1-201ENST00000549993 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
AC138331.1-201ENST00000549993 SETD1AO15047 1707 aaKnown RBP15.29■□□□□ 0.04
AC138331.1-201ENST00000549993 ABCC3O15438 1527 aa15.29■□□□□ 0.04
AC138331.1-201ENST00000549993 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
AC138331.1-201ENST00000549993 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
AC138331.1-201ENST00000549993 LRRC9Q6ZRR7 1453 aa15.28■□□□□ 0.04
AC138331.1-201ENST00000549993 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
AC138331.1-201ENST00000549993 RXRBP28702 533 aa15.28■□□□□ 0.04
AC138331.1-201ENST00000549993 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
AC138331.1-201ENST00000549993 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
AC138331.1-201ENST00000549993 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
AC138331.1-201ENST00000549993 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
AC138331.1-201ENST00000549993 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
AC138331.1-201ENST00000549993 XIRP1Q702N8 1843 aaKnown RBP15.26■□□□□ 0.03
AC138331.1-201ENST00000549993 MEX3CQ5U5Q3 659 aaKnown RBP15.24■□□□□ 0.03
AC138331.1-201ENST00000549993 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
AC138331.1-201ENST00000549993 LRP6O75581 1613 aa15.24■□□□□ 0.03
AC138331.1-201ENST00000549993 MSH6P52701 1360 aa15.24■□□□□ 0.03
AC138331.1-201ENST00000549993 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
AC138331.1-201ENST00000549993 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
AC138331.1-201ENST00000549993 ARHGAP31Q2M1Z3 1444 aa15.23■□□□□ 0.03
AC138331.1-201ENST00000549993 UBR1Q8IWV7 1749 aa15.22■□□□□ 0.03
AC138331.1-201ENST00000549993 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
AC138331.1-201ENST00000549993 IDI1Q13907 227 aa15.2■□□□□ 0.02
AC138331.1-201ENST00000549993 TET3O43151 1660 aa15.19■□□□□ 0.02
AC138331.1-201ENST00000549993 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
AC138331.1-201ENST00000549993 NKTRP30414 1462 aaKnown RBP15.19■□□□□ 0.02
AC138331.1-201ENST00000549993 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
AC138331.1-201ENST00000549993 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
AC138331.1-201ENST00000549993 COL16A1Q07092 1604 aaPredicted RBP15.15■□□□□ 0.02
AC138331.1-201ENST00000549993 MROH1Q8NDA8 1641 aa15.15■□□□□ 0.02
AC138331.1-201ENST00000549993 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
AC138331.1-201ENST00000549993 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
AC138331.1-201ENST00000549993 AFF2P51816 1311 aa15.14■□□□□ 0.01
AC138331.1-201ENST00000549993 RBM6P78332 1123 aaKnown RBP15.13■□□□□ 0.01
AC138331.1-201ENST00000549993 CADPS2Q86UW7 1296 aa15.12■□□□□ 0.01
AC138331.1-201ENST00000549993 C19orf44Q9H6X5 657 aa15.12■□□□□ 0.01
AC138331.1-201ENST00000549993 QTRT2Q9H974 415 aaKnown RBP15.12■□□□□ 0.01
AC138331.1-201ENST00000549993 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 NUTM2BA6NNL0 878 aaPredicted RBP15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 NUTM2EB1AL46 878 aaPredicted RBP15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 EFCAB6Q5THR3 1501 aa15.11■□□□□ 0.01
AC138331.1-201ENST00000549993 FOXD1Q16676 465 aa15.1■□□□□ 0.01
AC138331.1-201ENST00000549993 BCANQ96GW7 911 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms