RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-219ENST00000549395 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
LETMD1-219ENST00000549395 TNRQ92752 1358 aa12.62□□□□□ -0.39
LETMD1-219ENST00000549395 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
LETMD1-219ENST00000549395 MED14O60244 1454 aa12.61□□□□□ -0.39
LETMD1-219ENST00000549395 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
LETMD1-219ENST00000549395 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
LETMD1-219ENST00000549395 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
LETMD1-219ENST00000549395 SYNMO15061 1565 aa12.6□□□□□ -0.39
LETMD1-219ENST00000549395 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
LETMD1-219ENST00000549395 UGGT1Q9NYU2 1555 aa12.58□□□□□ -0.4
LETMD1-219ENST00000549395 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
LETMD1-219ENST00000549395 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
LETMD1-219ENST00000549395 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
LETMD1-219ENST00000549395 PZPP20742 1482 aa12.56□□□□□ -0.4
LETMD1-219ENST00000549395 CCDC18Q5T9S5 1454 aa12.56□□□□□ -0.4
LETMD1-219ENST00000549395 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
LETMD1-219ENST00000549395 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
LETMD1-219ENST00000549395 MIA2Q96PC5 1412 aa12.54□□□□□ -0.4
LETMD1-219ENST00000549395 NLRP1Q9C000 1473 aa12.53□□□□□ -0.4
LETMD1-219ENST00000549395 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
LETMD1-219ENST00000549395 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
LETMD1-219ENST00000549395 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.4
LETMD1-219ENST00000549395 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-219ENST00000549395 KIF3BO15066 747 aa12.51□□□□□ -0.41
LETMD1-219ENST00000549395 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■□□□□ 9.9
LETMD1-219ENST00000549395 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
LETMD1-219ENST00000549395 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
LETMD1-219ENST00000549395 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
LETMD1-219ENST00000549395 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
LETMD1-219ENST00000549395 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
LETMD1-219ENST00000549395 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
LETMD1-219ENST00000549395 ZNF644Q9H582 1327 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-219ENST00000549395 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
LETMD1-219ENST00000549395 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
LETMD1-219ENST00000549395 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
LETMD1-219ENST00000549395 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
LETMD1-219ENST00000549395 CHIC1Q5VXU3 224 aa12.44□□□□□ -0.42
LETMD1-219ENST00000549395 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
LETMD1-219ENST00000549395 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
LETMD1-219ENST00000549395 PHLPP1O60346 1717 aa12.43□□□□□ -0.42
LETMD1-219ENST00000549395 FYCO1Q9BQS8 1478 aa12.43□□□□□ -0.42
LETMD1-219ENST00000549395 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
LETMD1-219ENST00000549395 LTKP29376 864 aa12.42□□□□□ -0.42
LETMD1-219ENST00000549395 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
LETMD1-219ENST00000549395 TXNDC2Q86VQ3 553 aa12.41□□□□□ -0.42
LETMD1-219ENST00000549395 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
LETMD1-219ENST00000549395 JCADQ9P266 1359 aa12.4□□□□□ -0.42
LETMD1-219ENST00000549395 ERVK-7P63135 1459 aa12.4□□□□□ -0.43
LETMD1-219ENST00000549395 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
LETMD1-219ENST00000549395 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
LETMD1-219ENST00000549395 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
LETMD1-219ENST00000549395 LRP6O75581 1613 aa12.38□□□□□ -0.43
LETMD1-219ENST00000549395 LRRC9Q6ZRR7 1453 aa12.38□□□□□ -0.43
LETMD1-219ENST00000549395 ARHGAP23Q9P227 1491 aa12.38□□□□□ -0.43
LETMD1-219ENST00000549395 ABCC3O15438 1527 aa12.37□□□□□ -0.43
LETMD1-219ENST00000549395 SLIT1O75093 1534 aa12.37□□□□□ -0.43
LETMD1-219ENST00000549395 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
LETMD1-219ENST00000549395 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
LETMD1-219ENST00000549395 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
LETMD1-219ENST00000549395 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
LETMD1-219ENST00000549395 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
LETMD1-219ENST00000549395 CEP152O94986 1710 aa12.36□□□□□ -0.43
LETMD1-219ENST00000549395 EID1Q9Y6B2 187 aa12.35□□□□□ -0.43
LETMD1-219ENST00000549395 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
LETMD1-219ENST00000549395 KCNA6P17658 529 aa12.34□□□□□ -0.43
LETMD1-219ENST00000549395 RXRBP28702 533 aa12.34□□□□□ -0.43
LETMD1-219ENST00000549395 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
LETMD1-219ENST00000549395 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
LETMD1-219ENST00000549395 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
LETMD1-219ENST00000549395 MSH6P52701 1360 aa12.31□□□□□ -0.44
LETMD1-219ENST00000549395 PIK3C2BO00750 1634 aa12.31□□□□□ -0.44
LETMD1-219ENST00000549395 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
LETMD1-219ENST00000549395 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
LETMD1-219ENST00000549395 MROH1Q8NDA8 1641 aa12.3□□□□□ -0.44
LETMD1-219ENST00000549395 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-219ENST00000549395 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
LETMD1-219ENST00000549395 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
LETMD1-219ENST00000549395 TET3O43151 1660 aa12.29□□□□□ -0.44
LETMD1-219ENST00000549395 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
LETMD1-219ENST00000549395 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
LETMD1-219ENST00000549395 NKTRP30414 1462 aaKnown RBP12.28□□□□□ -0.44
LETMD1-219ENST00000549395 EHBP1L1Q8N3D4 1523 aa12.28□□□□□ -0.44
LETMD1-219ENST00000549395 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
LETMD1-219ENST00000549395 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
LETMD1-219ENST00000549395 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
LETMD1-219ENST00000549395 EIF2AK4Q9P2K8 1649 aaKnown RBP12.28□□□□□ -0.44
LETMD1-219ENST00000549395 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
LETMD1-219ENST00000549395 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
LETMD1-219ENST00000549395 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
LETMD1-219ENST00000549395 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
LETMD1-219ENST00000549395 NUTM2BA6NNL0 878 aaPredicted RBP12.26□□□□□ -0.45
LETMD1-219ENST00000549395 NUTM2EB1AL46 878 aaPredicted RBP12.26□□□□□ -0.45
LETMD1-219ENST00000549395 NUTM2AQ8IVF1 878 aaPredicted RBP12.26□□□□□ -0.45
LETMD1-219ENST00000549395 AFF2P51816 1311 aa12.25□□□□□ -0.45
LETMD1-219ENST00000549395 RGS12O14924 1447 aa12.25□□□□□ -0.45
LETMD1-219ENST00000549395 EFCAB6Q5THR3 1501 aa12.25□□□□□ -0.45
LETMD1-219ENST00000549395 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
LETMD1-219ENST00000549395 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
LETMD1-219ENST00000549395 ARHGAP31Q2M1Z3 1444 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms