RNA–Protein interactions for RNA: ENST00000547008.5

LETMD1-206, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-206ENST00000547008 KDM5DQ9BY66 1539 aa22.27■■□□□ 1.16
LETMD1-206ENST00000547008 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
LETMD1-206ENST00000547008 PRDM15P57071 1507 aaPredicted RBP22.26■■□□□ 1.15
LETMD1-206ENST00000547008 MROH1Q8NDA8 1641 aa22.25■■□□□ 1.15
LETMD1-206ENST00000547008 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
LETMD1-206ENST00000547008 KIF3BO15066 747 aa22.22■■□□□ 1.15
LETMD1-206ENST00000547008 TRIM52Q96A61 297 aa22.2■■□□□ 1.15
LETMD1-206ENST00000547008 VWDEQ8N2E2 1590 aa22.2■■□□□ 1.14
LETMD1-206ENST00000547008 NUP155O75694 1391 aa22.18■■□□□ 1.14
LETMD1-206ENST00000547008 PZPP20742 1482 aa22.18■■□□□ 1.14
LETMD1-206ENST00000547008 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
LETMD1-206ENST00000547008 KANK1Q14678 1352 aa22.17■■□□□ 1.14
LETMD1-206ENST00000547008 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
LETMD1-206ENST00000547008 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
LETMD1-206ENST00000547008 CEP152O94986 1710 aa22.14■■□□□ 1.13
LETMD1-206ENST00000547008 TET3O43151 1660 aa22.13■■□□□ 1.13
LETMD1-206ENST00000547008 LMTK2Q8IWU2 1503 aa22.13■■□□□ 1.13
LETMD1-206ENST00000547008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.133e-14■□□□□ 10.9
LETMD1-206ENST00000547008 GGT6Q6P531 493 aa22.11■■□□□ 1.13
LETMD1-206ENST00000547008 ABCC3O15438 1527 aa22.1■■□□□ 1.13
LETMD1-206ENST00000547008 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
LETMD1-206ENST00000547008 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
LETMD1-206ENST00000547008 ARID4BQ4LE39 1312 aaPredicted RBP22.09■■□□□ 1.13
LETMD1-206ENST00000547008 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
LETMD1-206ENST00000547008 CAMSAP1Q5T5Y3 1602 aa22.07■■□□□ 1.12
LETMD1-206ENST00000547008 EFCAB6Q5THR3 1501 aa22.07■■□□□ 1.12
LETMD1-206ENST00000547008 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
LETMD1-206ENST00000547008 E9PCH4 1651 aa22.06■■□□□ 1.12
LETMD1-206ENST00000547008 CLTCQ00610 1675 aaKnown RBP22.04■■□□□ 1.12
LETMD1-206ENST00000547008 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
LETMD1-206ENST00000547008 WASHC2CQ9Y4E1 1318 aa22.03■■□□□ 1.12
LETMD1-206ENST00000547008 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.12
LETMD1-206ENST00000547008 PKD2Q13563 968 aa22.02■■□□□ 1.12
LETMD1-206ENST00000547008 MROH2AA6NES4 1674 aa22.02■■□□□ 1.12
LETMD1-206ENST00000547008 MLECQ14165 292 aa22.01■■□□□ 1.11
LETMD1-206ENST00000547008 RPRD2Q5VT52 1461 aaKnown RBP22.01■■□□□ 1.11
LETMD1-206ENST00000547008 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
LETMD1-206ENST00000547008 ARHGAP31Q2M1Z3 1444 aa21.99■■□□□ 1.11
LETMD1-206ENST00000547008 SPHKAPQ2M3C7 1700 aa21.98■■□□□ 1.11
LETMD1-206ENST00000547008 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
LETMD1-206ENST00000547008 NPATQ14207 1427 aa21.96■■□□□ 1.11
LETMD1-206ENST00000547008 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
LETMD1-206ENST00000547008 MADDQ8WXG6 1647 aa21.94■■□□□ 1.1
LETMD1-206ENST00000547008 FOXD1Q16676 465 aa21.94■■□□□ 1.1
LETMD1-206ENST00000547008 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
LETMD1-206ENST00000547008 PREX1Q8TCU6 1659 aa21.93■■□□□ 1.1
LETMD1-206ENST00000547008 TRPM2O94759 1503 aa21.92■■□□□ 1.1
LETMD1-206ENST00000547008 PTPRTO14522 1441 aa21.92■■□□□ 1.1
LETMD1-206ENST00000547008 RIMS1Q86UR5 1692 aaKnown RBP21.9■■□□□ 1.1
LETMD1-206ENST00000547008 CFAP65Q6ZU64 1925 aaKnown RBP21.9■■□□□ 1.1
LETMD1-206ENST00000547008 PLA2R1Q13018 1463 aa21.89■■□□□ 1.09
LETMD1-206ENST00000547008 C3P01024 1663 aa21.89■■□□□ 1.09
LETMD1-206ENST00000547008 NOS1P29475 1434 aa21.88■■□□□ 1.09
LETMD1-206ENST00000547008 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
LETMD1-206ENST00000547008 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
LETMD1-206ENST00000547008 SPATA31D1Q6ZQQ2 1576 aa21.86■■□□□ 1.09
LETMD1-206ENST00000547008 SYNMO15061 1565 aa21.85■■□□□ 1.09
LETMD1-206ENST00000547008 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
LETMD1-206ENST00000547008 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
LETMD1-206ENST00000547008 PIK3C2BO00750 1634 aa21.83■■□□□ 1.09
LETMD1-206ENST00000547008 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
LETMD1-206ENST00000547008 KIF1BO60333 1816 aa21.79■■□□□ 1.08
LETMD1-206ENST00000547008 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
LETMD1-206ENST00000547008 NEURL4Q96JN8 1562 aa21.77■■□□□ 1.08
LETMD1-206ENST00000547008 FBXO31Q5XUX0 539 aaPredicted RBP21.77■■□□□ 1.08
LETMD1-206ENST00000547008 NEUROD1Q13562 356 aa21.75■■□□□ 1.07
LETMD1-206ENST00000547008 PTPRMP28827 1452 aa21.74■■□□□ 1.07
LETMD1-206ENST00000547008 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
LETMD1-206ENST00000547008 TNRQ92752 1358 aa21.74■■□□□ 1.07
LETMD1-206ENST00000547008 SLC52A1Q9NWF4 448 aa21.74■■□□□ 1.07
LETMD1-206ENST00000547008 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
LETMD1-206ENST00000547008 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
LETMD1-206ENST00000547008 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
LETMD1-206ENST00000547008 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-206ENST00000547008 SPATA31E1Q6ZUB1 1445 aa21.71■■□□□ 1.07
LETMD1-206ENST00000547008 KDM5AP29375 1690 aaKnown RBP21.7■■□□□ 1.07
LETMD1-206ENST00000547008 NLRP1Q9C000 1473 aa21.7■■□□□ 1.06
LETMD1-206ENST00000547008 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
LETMD1-206ENST00000547008 TMEM131LA2VDJ0 1609 aa21.69■■□□□ 1.06
LETMD1-206ENST00000547008 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
LETMD1-206ENST00000547008 MYO5BQ9ULV0 1848 aa21.67■■□□□ 1.06
LETMD1-206ENST00000547008 IDI1Q13907 227 aa21.66■■□□□ 1.06
LETMD1-206ENST00000547008 ZNF142P52746 1687 aaPredicted RBP21.65■■□□□ 1.06
LETMD1-206ENST00000547008 IFT172Q9UG01 1749 aa21.64■■□□□ 1.06
LETMD1-206ENST00000547008 KDM4FA0A1W2PPD8 638 aa21.64■■□□□ 1.05
LETMD1-206ENST00000547008 UBR1Q8IWV7 1749 aa21.64■■□□□ 1.05
LETMD1-206ENST00000547008 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
LETMD1-206ENST00000547008 L3MBTL2Q969R5 705 aa21.61■■□□□ 1.05
LETMD1-206ENST00000547008 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
LETMD1-206ENST00000547008 PPLO60437 1756 aa21.61■■□□□ 1.05
LETMD1-206ENST00000547008 A2ML1A8K2U0 1454 aa21.61■■□□□ 1.05
LETMD1-206ENST00000547008 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
LETMD1-206ENST00000547008 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
LETMD1-206ENST00000547008 STAG3Q9UJ98 1225 aa21.57■■□□□ 1.04
LETMD1-206ENST00000547008 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
LETMD1-206ENST00000547008 RPGRIP1LQ68CZ1 1315 aa21.56■■□□□ 1.04
LETMD1-206ENST00000547008 STAC3Q96MF2 364 aa21.56■■□□□ 1.04
LETMD1-206ENST00000547008 MYOM2P54296 1465 aa21.56■■□□□ 1.04
LETMD1-206ENST00000547008 ZNF326Q5BKZ1 582 aaKnown RBP21.55■■□□□ 1.04
LETMD1-206ENST00000547008 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms