RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
PRKDC-211ENST00000546304 TNIKQ9UKE5 1360 aa10.29□□□□□ -0.76
PRKDC-211ENST00000546304 PPP1R37O75864 691 aa10.28□□□□□ -0.76
PRKDC-211ENST00000546304 SNPHO15079 494 aa10.27□□□□□ -0.77
PRKDC-211ENST00000546304 ARHGAP35Q9NRY4 1499 aa10.26□□□□□ -0.77
PRKDC-211ENST00000546304 FHOD3Q2V2M9 1422 aa10.25□□□□□ -0.77
PRKDC-211ENST00000546304 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
PRKDC-211ENST00000546304 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
PRKDC-211ENST00000546304 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
PRKDC-211ENST00000546304 CLIP1P30622 1438 aa10.24□□□□□ -0.77
PRKDC-211ENST00000546304 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
PRKDC-211ENST00000546304 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-211ENST00000546304 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-211ENST00000546304 PTPRGP23470 1445 aa10.23□□□□□ -0.77
PRKDC-211ENST00000546304 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
PRKDC-211ENST00000546304 ABCA8O94911 1581 aa10.22□□□□□ -0.77
PRKDC-211ENST00000546304 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-211ENST00000546304 FAM163AQ96GL9 167 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-211ENST00000546304 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
PRKDC-211ENST00000546304 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.78
PRKDC-211ENST00000546304 LOC105371045A0A1W2PR82 267 aa10.2□□□□□ -0.78
PRKDC-211ENST00000546304 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
PRKDC-211ENST00000546304 HECW1Q76N89 1606 aa10.19□□□□□ -0.78
PRKDC-211ENST00000546304 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
PRKDC-211ENST00000546304 FMN1Q68DA7 1419 aa10.19□□□□□ -0.78
PRKDC-211ENST00000546304 KIF3CO14782 793 aa10.19□□□□□ -0.78
PRKDC-211ENST00000546304 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
PRKDC-211ENST00000546304 ST18O60284 1047 aa10.18□□□□□ -0.78
PRKDC-211ENST00000546304 CYB5RLQ6IPT4 315 aa10.18□□□□□ -0.78
PRKDC-211ENST00000546304 ZCCHC11Q5TAX3 1644 aaKnown RBP10.18□□□□□ -0.78
PRKDC-211ENST00000546304 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
PRKDC-211ENST00000546304 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
PRKDC-211ENST00000546304 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
PRKDC-211ENST00000546304 LRRIQ1Q96JM4 1722 aa10.16□□□□□ -0.78
PRKDC-211ENST00000546304 NUP153P49790 1475 aaKnown RBP10.16□□□□□ -0.78
PRKDC-211ENST00000546304 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
PRKDC-211ENST00000546304 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
PRKDC-211ENST00000546304 KDM5BQ9UGL1 1544 aa10.15□□□□□ -0.78
PRKDC-211ENST00000546304 MAPKBP1O60336 1514 aa10.14□□□□□ -0.79
PRKDC-211ENST00000546304 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
PRKDC-211ENST00000546304 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
PRKDC-211ENST00000546304 CFAP43Q8NDM7 1665 aa10.12□□□□□ -0.79
PRKDC-211ENST00000546304 POTEMA6NI47 508 aa10.12□□□□□ -0.79
PRKDC-211ENST00000546304 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
PRKDC-211ENST00000546304 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
PRKDC-211ENST00000546304 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
PRKDC-211ENST00000546304 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
PRKDC-211ENST00000546304 CDK13Q14004 1512 aaKnown RBP10.11□□□□□ -0.79
PRKDC-211ENST00000546304 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
PRKDC-211ENST00000546304 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
PRKDC-211ENST00000546304 EPRSP07814 1512 aaKnown RBP10.1□□□□□ -0.79
PRKDC-211ENST00000546304 ZSWIM6Q9HCJ5 1215 aa10.09□□□□□ -0.79
PRKDC-211ENST00000546304 KIF13AQ9H1H9 1805 aa10.09□□□□□ -0.79
PRKDC-211ENST00000546304 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
PRKDC-211ENST00000546304 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
PRKDC-211ENST00000546304 ZNF710Q8N1W2 664 aa10.08□□□□□ -0.8
PRKDC-211ENST00000546304 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
PRKDC-211ENST00000546304 ATP10BO94823 1461 aa10.08□□□□□ -0.8
PRKDC-211ENST00000546304 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
PRKDC-211ENST00000546304 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
PRKDC-211ENST00000546304 FOXK1P85037 733 aa10.07□□□□□ -0.8
PRKDC-211ENST00000546304 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
PRKDC-211ENST00000546304 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
PRKDC-211ENST00000546304 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
PRKDC-211ENST00000546304 SLC34A2O95436 690 aa10.05□□□□□ -0.8
PRKDC-211ENST00000546304 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-211ENST00000546304 KIF14Q15058 1648 aa10.04□□□□□ -0.8
PRKDC-211ENST00000546304 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
PRKDC-211ENST00000546304 MAGI3Q5TCQ9 1506 aa10.03□□□□□ -0.8
PRKDC-211ENST00000546304 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
PRKDC-211ENST00000546304 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
PRKDC-211ENST00000546304 GLI2P10070 1586 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 PDE4AP27815 886 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 DSG2Q14126 1118 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 MAP3K4Q9Y6R4 1608 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 MAP3K1Q13233 1512 aa10.02□□□□□ -0.81
PRKDC-211ENST00000546304 TTC37Q6PGP7 1564 aa10.01□□□□□ -0.81
PRKDC-211ENST00000546304 ABCA9Q8IUA7 1624 aa10.01□□□□□ -0.81
PRKDC-211ENST00000546304 EMP3P54852 163 aa10.01□□□□□ -0.81
PRKDC-211ENST00000546304 PLPP6Q8IY26 295 aa10.01□□□□□ -0.81
PRKDC-211ENST00000546304 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
PRKDC-211ENST00000546304 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
PRKDC-211ENST00000546304 TROQ12816 1431 aaPredicted RBP10□□□□□ -0.81
PRKDC-211ENST00000546304 PAXIP1Q6ZW49 1069 aaPredicted RBP10□□□□□ -0.81
PRKDC-211ENST00000546304 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
PRKDC-211ENST00000546304 TSPOAP1O95153 1857 aa9.99□□□□□ -0.81
PRKDC-211ENST00000546304 PPRC1Q5VV67 1664 aaKnown RBP9.99□□□□□ -0.81
PRKDC-211ENST00000546304 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
PRKDC-211ENST00000546304 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
PRKDC-211ENST00000546304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRKDC-211ENST00000546304 MFSD10Q14728 455 aa9.97□□□□□ -0.81
PRKDC-211ENST00000546304 ARSIQ5FYB1 569 aa9.97□□□□□ -0.81
PRKDC-211ENST00000546304 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
PRKDC-211ENST00000546304 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
PRKDC-211ENST00000546304 CFAP44Q96MT7 982 aa9.97□□□□□ -0.81
PRKDC-211ENST00000546304 PREX2Q70Z35 1606 aa9.96□□□□□ -0.81
PRKDC-211ENST00000546304 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.81
PRKDC-211ENST00000546304 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms