RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PKD2Q13563 968 aa28.19■■■□□ 2.1
SKP2-208ENST00000546211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.18■■■□□ 2.11e-6■■□□□ 12.2
SKP2-208ENST00000546211 ANKRD30BQ9BXX2 1392 aa28.17■■■□□ 2.1
SKP2-208ENST00000546211 A2MP01023 1474 aa28.17■■■□□ 2.1
SKP2-208ENST00000546211 IQGAP3Q86VI3 1631 aa28.16■■■□□ 2.1
SKP2-208ENST00000546211 FRMPD1Q5SYB0 1578 aa28.15■■■□□ 2.1
SKP2-208ENST00000546211 ABCA6Q8N139 1617 aa28.14■■■□□ 2.09
SKP2-208ENST00000546211 TONSLQ96HA7 1378 aa28.13■■■□□ 2.09
SKP2-208ENST00000546211 ZMYM4Q5VZL5 1548 aa28.12■■■□□ 2.09
SKP2-208ENST00000546211 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
SKP2-208ENST00000546211 KIF3BO15066 747 aa28.11■■■□□ 2.09
SKP2-208ENST00000546211 DIP2CQ9Y2E4 1556 aa28.09■■■□□ 2.09
SKP2-208ENST00000546211 KANK1Q14678 1352 aa28.08■■■□□ 2.09
SKP2-208ENST00000546211 RPRD2Q5VT52 1461 aaKnown RBP28.06■■■□□ 2.08
SKP2-208ENST00000546211 PRDM15P57071 1507 aaPredicted RBP28.04■■■□□ 2.08
SKP2-208ENST00000546211 YEATS2Q9ULM3 1422 aa28.03■■■□□ 2.08
SKP2-208ENST00000546211 RNF17Q9BXT8 1623 aaKnown RBP28.01■■■□□ 2.07
SKP2-208ENST00000546211 VWDEQ8N2E2 1590 aa28.01■■■□□ 2.07
SKP2-208ENST00000546211 BCORL1Q5H9F3 1711 aa28.01■■■□□ 2.07
SKP2-208ENST00000546211 MROH1Q8NDA8 1641 aa28■■■□□ 2.07
SKP2-208ENST00000546211 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
SKP2-208ENST00000546211 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
SKP2-208ENST00000546211 COL17A1Q9UMD9 1497 aaPredicted RBP27.97■■■□□ 2.07
SKP2-208ENST00000546211 TET3O43151 1660 aa27.96■■■□□ 2.07
SKP2-208ENST00000546211 ATP10AO60312 1499 aa27.95■■■□□ 2.06
SKP2-208ENST00000546211 GGT6Q6P531 493 aa27.91■■■□□ 2.06
SKP2-208ENST00000546211 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
SKP2-208ENST00000546211 E9PCH4 1651 aa27.9■■■□□ 2.06
SKP2-208ENST00000546211 LMTK2Q8IWU2 1503 aa27.9■■■□□ 2.06
SKP2-208ENST00000546211 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.06
SKP2-208ENST00000546211 L3MBTL2Q969R5 705 aa27.89■■■□□ 2.05
SKP2-208ENST00000546211 PLA2R1Q13018 1463 aa27.87■■■□□ 2.05
SKP2-208ENST00000546211 ARHGEF40Q8TER5 1519 aa27.87■■■□□ 2.05
SKP2-208ENST00000546211 ZNF316A6NFI3 1004 aaPredicted RBP27.86■■■□□ 2.05
SKP2-208ENST00000546211 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
SKP2-208ENST00000546211 CEP152O94986 1710 aa27.85■■■□□ 2.05
SKP2-208ENST00000546211 AGLP35573 1532 aa27.82■■■□□ 2.04
SKP2-208ENST00000546211 WASHC2CQ9Y4E1 1318 aa27.82■■■□□ 2.04
SKP2-208ENST00000546211 ABCC3O15438 1527 aa27.81■■■□□ 2.04
SKP2-208ENST00000546211 PTPRTO14522 1441 aa27.8■■■□□ 2.04
SKP2-208ENST00000546211 SPHKAPQ2M3C7 1700 aa27.8■■■□□ 2.04
SKP2-208ENST00000546211 TRPM2O94759 1503 aa27.8■■■□□ 2.04
SKP2-208ENST00000546211 ZC3H13Q5T200 1668 aaKnown RBP27.78■■■□□ 2.04
SKP2-208ENST00000546211 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
SKP2-208ENST00000546211 NPATQ14207 1427 aa27.71■■■□□ 2.03
SKP2-208ENST00000546211 PPP6R1Q9UPN7 881 aa27.7■■■□□ 2.03
SKP2-208ENST00000546211 CLTCL1P53675 1640 aa27.68■■■□□ 2.02
SKP2-208ENST00000546211 SIGLEC1Q9BZZ2 1709 aa27.68■■■□□ 2.02
SKP2-208ENST00000546211 ARHGAP31Q2M1Z3 1444 aa27.68■■■□□ 2.02
SKP2-208ENST00000546211 NBPF8Q3BBV2 869 aa27.65■■■□□ 2.02
SKP2-208ENST00000546211 CNTLNQ9NXG0 1405 aa27.65■■■□□ 2.02
SKP2-208ENST00000546211 RGL3Q3MIN7 710 aa27.65■■■□□ 2.02
SKP2-208ENST00000546211 DCAF11Q8TEB1 546 aa27.65■■■□□ 2.02
SKP2-208ENST00000546211 UHRF1BP1Q6BDS2 1440 aa27.63■■■□□ 2.01
SKP2-208ENST00000546211 SPATA31E1Q6ZUB1 1445 aa27.63■■■□□ 2.01
SKP2-208ENST00000546211 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
SKP2-208ENST00000546211 KDM2AQ9Y2K7 1162 aa27.6■■■□□ 2.01
SKP2-208ENST00000546211 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
SKP2-208ENST00000546211 MLECQ14165 292 aa27.6■■■□□ 2.01
SKP2-208ENST00000546211 NEURL4Q96JN8 1562 aa27.59■■■□□ 2.01
SKP2-208ENST00000546211 NOS1P29475 1434 aa27.59■■■□□ 2.01
SKP2-208ENST00000546211 UGGT1Q9NYU2 1555 aa27.58■■■□□ 2.01
SKP2-208ENST00000546211 CLTCQ00610 1675 aaKnown RBP27.56■■■□□ 2
SKP2-208ENST00000546211 KIF1BO60333 1816 aa27.55■■■□□ 2
SKP2-208ENST00000546211 ESF1Q9H501 851 aaKnown RBP27.55■■■□□ 2
SKP2-208ENST00000546211 CFAP65Q6ZU64 1925 aaKnown RBP27.53■■■□□ 2
SKP2-208ENST00000546211 STAC3Q96MF2 364 aa27.52■■■□□ 2
SKP2-208ENST00000546211 RALGAPBQ86X10 1494 aa27.51■■■□□ 2
SKP2-208ENST00000546211 PREX1Q8TCU6 1659 aa27.51■■■□□ 2
SKP2-208ENST00000546211 SYNMO15061 1565 aa27.51■■□□□ 1.99
SKP2-208ENST00000546211 PRAG1Q86YV5 1406 aa27.51■■□□□ 1.99
SKP2-208ENST00000546211 DIEXFQ68CQ4 756 aaKnown RBP27.51■■□□□ 1.99
SKP2-208ENST00000546211 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
SKP2-208ENST00000546211 PIK3C2BO00750 1634 aa27.48■■□□□ 1.99
SKP2-208ENST00000546211 ADGRB3O60242 1522 aa27.47■■□□□ 1.99
SKP2-208ENST00000546211 ERVK-7P63135 1459 aa27.47■■□□□ 1.99
SKP2-208ENST00000546211 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
SKP2-208ENST00000546211 CHGAP10645 457 aaKnown RBP27.45■■□□□ 1.99
SKP2-208ENST00000546211 HSPA5P11021 654 aaKnown RBP27.45■■□□□ 1.99
SKP2-208ENST00000546211 HIRIP3Q9BW71 556 aaPredicted RBP27.45■■□□□ 1.99
SKP2-208ENST00000546211 MROH2AA6NES4 1674 aa27.45■■□□□ 1.98
SKP2-208ENST00000546211 TRPM1Q7Z4N2 1603 aa27.43■■□□□ 1.98
SKP2-208ENST00000546211 FBXO31Q5XUX0 539 aaPredicted RBP27.42■■□□□ 1.98
SKP2-208ENST00000546211 ZMYM3Q14202 1370 aa27.41■■□□□ 1.98
SKP2-208ENST00000546211 SPATA31D1Q6ZQQ2 1576 aa27.4■■□□□ 1.98
SKP2-208ENST00000546211 ROCK2O75116 1388 aaKnown RBP27.4■■□□□ 1.98
SKP2-208ENST00000546211 MADDQ8WXG6 1647 aa27.39■■□□□ 1.98
SKP2-208ENST00000546211 IDI1Q13907 227 aa27.39■■□□□ 1.98
SKP2-208ENST00000546211 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.98
SKP2-208ENST00000546211 MYOM2P54296 1465 aa27.39■■□□□ 1.97
SKP2-208ENST00000546211 RPGRIP1LQ68CZ1 1315 aa27.37■■□□□ 1.97
SKP2-208ENST00000546211 IFT172Q9UG01 1749 aa27.37■■□□□ 1.97
SKP2-208ENST00000546211 USP47Q96K76 1375 aa27.35■■□□□ 1.97
SKP2-208ENST00000546211 GPRASP1Q5JY77 1395 aa27.33■■□□□ 1.97
SKP2-208ENST00000546211 LAMC1P11047 1609 aa27.32■■□□□ 1.96
SKP2-208ENST00000546211 PPLO60437 1756 aa27.31■■□□□ 1.96
SKP2-208ENST00000546211 TMEM131LA2VDJ0 1609 aa27.3■■□□□ 1.96
SKP2-208ENST00000546211 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
SKP2-208ENST00000546211 NRXN1Q9ULB1 1477 aa27.28■■□□□ 1.96
SKP2-208ENST00000546211 FER1L4A9Z1Z3 1794 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms