RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
LYSMD4-210ENST00000545021 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
LYSMD4-210ENST00000545021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.73■■□□□ 1.71
LYSMD4-210ENST00000545021 NUDCQ9Y266 331 aa25.73■■□□□ 1.71
LYSMD4-210ENST00000545021 TCERG1O14776 1098 aaKnown RBP25.72■■□□□ 1.71
LYSMD4-210ENST00000545021 SCAPERQ9BY12 1400 aa25.72■■□□□ 1.71
LYSMD4-210ENST00000545021 NPM2Q86SE8 214 aaKnown RBP25.72■■□□□ 1.71
LYSMD4-210ENST00000545021 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
LYSMD4-210ENST00000545021 PLEKHH2Q8IVE3 1493 aa25.71■■□□□ 1.71
LYSMD4-210ENST00000545021 REREQ9P2R6 1566 aa25.71■■□□□ 1.71
LYSMD4-210ENST00000545021 GPATCH8Q9UKJ3 1502 aaKnown RBP25.71■■□□□ 1.71
LYSMD4-210ENST00000545021 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
LYSMD4-210ENST00000545021 HSPA5P11021 654 aaKnown RBP25.69■■□□□ 1.7
LYSMD4-210ENST00000545021 FAM43AQ8N2R8 423 aa25.69■■□□□ 1.7
LYSMD4-210ENST00000545021 MTUS2Q5JR59 1369 aa25.68■■□□□ 1.7
LYSMD4-210ENST00000545021 ADAMTSL3P82987 1691 aa25.67■■□□□ 1.7
LYSMD4-210ENST00000545021 SAMD9LQ8IVG5 1584 aa25.67■■□□□ 1.7
LYSMD4-210ENST00000545021 KIAA1107Q9UPP5 1409 aa25.66■■□□□ 1.7
LYSMD4-210ENST00000545021 HECW2Q9P2P5 1572 aa25.66■■□□□ 1.7
LYSMD4-210ENST00000545021 KDM4FA0A1W2PPD8 638 aa25.66■■□□□ 1.7
LYSMD4-210ENST00000545021 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
LYSMD4-210ENST00000545021 PDE4AP27815 886 aa25.65■■□□□ 1.7
LYSMD4-210ENST00000545021 MLH3Q9UHC1 1453 aa25.65■■□□□ 1.7
LYSMD4-210ENST00000545021 RAPGEF3O95398 923 aa25.64■■□□□ 1.69
LYSMD4-210ENST00000545021 GLIPR1L2Q4G1C9 344 aa25.64■■□□□ 1.69
LYSMD4-210ENST00000545021 BACH2Q9BYV9 841 aa25.64■■□□□ 1.69
LYSMD4-210ENST00000545021 MS4A1P11836 297 aa25.63■■□□□ 1.69
LYSMD4-210ENST00000545021 DDRGK1Q96HY6 314 aa25.62■■□□□ 1.69
LYSMD4-210ENST00000545021 NCOA1Q15788 1441 aa25.61■■□□□ 1.69
LYSMD4-210ENST00000545021 FRAT1Q92837 279 aaPredicted RBP25.61■■□□□ 1.69
LYSMD4-210ENST00000545021 EIF4G2P78344 907 aaKnown RBP eCLIP25.59■■□□□ 1.69
LYSMD4-210ENST00000545021 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
LYSMD4-210ENST00000545021 ARHGEF12Q9NZN5 1544 aa25.59■■□□□ 1.69
LYSMD4-210ENST00000545021 CCDC7Q96M83 1385 aa25.59■■□□□ 1.69
LYSMD4-210ENST00000545021 NFKBIBQ15653 356 aa25.58■■□□□ 1.69
LYSMD4-210ENST00000545021 ATP10AO60312 1499 aa25.58■■□□□ 1.69
LYSMD4-210ENST00000545021 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
LYSMD4-210ENST00000545021 DIP2CQ9Y2E4 1556 aa25.57■■□□□ 1.68
LYSMD4-210ENST00000545021 AGLP35573 1532 aa25.54■■□□□ 1.68
LYSMD4-210ENST00000545021 HFM1A2PYH4 1435 aa25.54■■□□□ 1.68
LYSMD4-210ENST00000545021 YEATS2Q9ULM3 1422 aa25.54■■□□□ 1.68
LYSMD4-210ENST00000545021 INO80Q9ULG1 1556 aaPredicted RBP25.54■■□□□ 1.68
LYSMD4-210ENST00000545021 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
LYSMD4-210ENST00000545021 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
LYSMD4-210ENST00000545021 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
LYSMD4-210ENST00000545021 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
LYSMD4-210ENST00000545021 TRAPPC8Q9Y2L5 1435 aa25.52■■□□□ 1.68
LYSMD4-210ENST00000545021 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
LYSMD4-210ENST00000545021 ARHGEF5Q12774 1597 aa25.5■■□□□ 1.67
LYSMD4-210ENST00000545021 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.67
LYSMD4-210ENST00000545021 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.67
LYSMD4-210ENST00000545021 MBD5Q9P267 1494 aa25.45■■□□□ 1.66
LYSMD4-210ENST00000545021 MIA2Q96PC5 1412 aa25.45■■□□□ 1.66
LYSMD4-210ENST00000545021 MADDQ8WXG6 1647 aa25.45■■□□□ 1.66
LYSMD4-210ENST00000545021 ATP7AQ04656 1500 aa25.44■■□□□ 1.66
LYSMD4-210ENST00000545021 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
LYSMD4-210ENST00000545021 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
LYSMD4-210ENST00000545021 ZMYND15Q9H091 742 aa25.42■■□□□ 1.66
LYSMD4-210ENST00000545021 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
LYSMD4-210ENST00000545021 PLXNC1O60486 1568 aa25.41■■□□□ 1.66
LYSMD4-210ENST00000545021 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
LYSMD4-210ENST00000545021 FER1L4A9Z1Z3 1794 aa25.4■■□□□ 1.66
LYSMD4-210ENST00000545021 RRP1P56182 461 aaKnown RBP25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 FGD6Q6ZV73 1430 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 PTPRMP28827 1452 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 MYOM3Q5VTT5 1437 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 AFAP1Q8N556 730 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 CCDC141Q6ZP82 1450 aa25.38■■□□□ 1.65
LYSMD4-210ENST00000545021 NAIPQ13075 1403 aa25.37■■□□□ 1.65
LYSMD4-210ENST00000545021 RIMS1Q86UR5 1692 aaKnown RBP25.37■■□□□ 1.65
LYSMD4-210ENST00000545021 EXOC6Q8TAG9 804 aa25.36■■□□□ 1.65
LYSMD4-210ENST00000545021 VSIG10Q8N0Z9 540 aa25.35■■□□□ 1.65
LYSMD4-210ENST00000545021 PTPRKQ15262 1439 aa25.34■■□□□ 1.65
LYSMD4-210ENST00000545021 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
LYSMD4-210ENST00000545021 KIF7Q2M1P5 1343 aa25.33■■□□□ 1.64
LYSMD4-210ENST00000545021 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
LYSMD4-210ENST00000545021 TCOF1Q13428 1488 aaKnown RBP25.31■■□□□ 1.64
LYSMD4-210ENST00000545021 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
LYSMD4-210ENST00000545021 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
LYSMD4-210ENST00000545021 DHX29Q7Z478 1369 aaKnown RBP25.28■■□□□ 1.64
LYSMD4-210ENST00000545021 A2MP01023 1474 aa25.28■■□□□ 1.64
LYSMD4-210ENST00000545021 ZNF777Q9ULD5 760 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-210ENST00000545021 CROCC2H7BZ55 1655 aa25.28■■□□□ 1.64
LYSMD4-210ENST00000545021 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-210ENST00000545021 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.64
LYSMD4-210ENST00000545021 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
LYSMD4-210ENST00000545021 SHANK2Q9UPX8 1470 aa25.27■■□□□ 1.64
LYSMD4-210ENST00000545021 RRAGDQ9NQL2 400 aaPredicted RBP25.25■■□□□ 1.63
LYSMD4-210ENST00000545021 RRP9O43818 475 aaKnown RBP25.25■■□□□ 1.63
LYSMD4-210ENST00000545021 FRAT2O75474 233 aaPredicted RBP25.24■■□□□ 1.63
LYSMD4-210ENST00000545021 PNISRQ8TF01 805 aaKnown RBP25.23■■□□□ 1.63
LYSMD4-210ENST00000545021 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
LYSMD4-210ENST00000545021 SLC4A3P48751 1232 aa25.22■■□□□ 1.63
LYSMD4-210ENST00000545021 EIF2AK4Q9P2K8 1649 aaKnown RBP25.21■■□□□ 1.63
LYSMD4-210ENST00000545021 RCAN3Q9UKA8 241 aa25.21■■□□□ 1.63
LYSMD4-210ENST00000545021 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
LYSMD4-210ENST00000545021 HSP90AA2PQ14568 343 aaPredicted RBP25.2■■□□□ 1.62
LYSMD4-210ENST00000545021 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms