RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SIGLEC1Q9BZZ2 1709 aa17.65■□□□□ 0.42
DDB1-223ENST00000543658 KIF3BO15066 747 aa17.65■□□□□ 0.42
DDB1-223ENST00000543658 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
DDB1-223ENST00000543658 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
DDB1-223ENST00000543658 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
DDB1-223ENST00000543658 CEP152O94986 1710 aa17.63■□□□□ 0.41
DDB1-223ENST00000543658 KANK1Q14678 1352 aa17.63■□□□□ 0.41
DDB1-223ENST00000543658 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
DDB1-223ENST00000543658 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
DDB1-223ENST00000543658 HRCP23327 699 aa17.61■□□□□ 0.41
DDB1-223ENST00000543658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.411e-8■■□□□ 11.6
DDB1-223ENST00000543658 KDM5DQ9BY66 1539 aa17.6■□□□□ 0.41
DDB1-223ENST00000543658 MROH1Q8NDA8 1641 aa17.6■□□□□ 0.41
DDB1-223ENST00000543658 FER1L4A9Z1Z3 1794 aa17.59■□□□□ 0.41
DDB1-223ENST00000543658 GGT6Q6P531 493 aa17.59■□□□□ 0.41
DDB1-223ENST00000543658 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
DDB1-223ENST00000543658 NUP155O75694 1391 aa17.57■□□□□ 0.4
DDB1-223ENST00000543658 TET3O43151 1660 aa17.57■□□□□ 0.4
DDB1-223ENST00000543658 CLTCQ00610 1675 aaKnown RBP17.56■□□□□ 0.4
DDB1-223ENST00000543658 MLECQ14165 292 aa17.56■□□□□ 0.4
DDB1-223ENST00000543658 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
DDB1-223ENST00000543658 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
DDB1-223ENST00000543658 VWDEQ8N2E2 1590 aa17.54■□□□□ 0.4
DDB1-223ENST00000543658 ABCC3O15438 1527 aa17.52■□□□□ 0.39
DDB1-223ENST00000543658 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
DDB1-223ENST00000543658 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
DDB1-223ENST00000543658 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
DDB1-223ENST00000543658 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
DDB1-223ENST00000543658 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
DDB1-223ENST00000543658 CFAP65Q6ZU64 1925 aaKnown RBP17.51■□□□□ 0.39
DDB1-223ENST00000543658 PZPP20742 1482 aa17.5■□□□□ 0.39
DDB1-223ENST00000543658 LMTK2Q8IWU2 1503 aa17.5■□□□□ 0.39
DDB1-223ENST00000543658 E9PCH4 1651 aa17.49■□□□□ 0.39
DDB1-223ENST00000543658 RIMS1Q86UR5 1692 aaKnown RBP17.49■□□□□ 0.39
DDB1-223ENST00000543658 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
DDB1-223ENST00000543658 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
DDB1-223ENST00000543658 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
DDB1-223ENST00000543658 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
DDB1-223ENST00000543658 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
DDB1-223ENST00000543658 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
DDB1-223ENST00000543658 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
DDB1-223ENST00000543658 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
DDB1-223ENST00000543658 PREX1Q8TCU6 1659 aa17.43■□□□□ 0.38
DDB1-223ENST00000543658 PKD2Q13563 968 aa17.43■□□□□ 0.38
DDB1-223ENST00000543658 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
DDB1-223ENST00000543658 C3P01024 1663 aa17.42■□□□□ 0.38
DDB1-223ENST00000543658 ARHGAP31Q2M1Z3 1444 aa17.39■□□□□ 0.38
DDB1-223ENST00000543658 NPATQ14207 1427 aa17.38■□□□□ 0.37
DDB1-223ENST00000543658 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
DDB1-223ENST00000543658 TRPM2O94759 1503 aa17.37■□□□□ 0.37
DDB1-223ENST00000543658 KIF1BO60333 1816 aa17.36■□□□□ 0.37
DDB1-223ENST00000543658 FOXD1Q16676 465 aa17.36■□□□□ 0.37
DDB1-223ENST00000543658 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
DDB1-223ENST00000543658 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
DDB1-223ENST00000543658 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
DDB1-223ENST00000543658 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
DDB1-223ENST00000543658 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
DDB1-223ENST00000543658 SYNMO15061 1565 aa17.32■□□□□ 0.36
DDB1-223ENST00000543658 CLTCL1P53675 1640 aa17.31■□□□□ 0.36
DDB1-223ENST00000543658 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
DDB1-223ENST00000543658 PTPRMP28827 1452 aa17.3■□□□□ 0.36
DDB1-223ENST00000543658 PTPRTO14522 1441 aa17.3■□□□□ 0.36
DDB1-223ENST00000543658 NOS1P29475 1434 aa17.3■□□□□ 0.36
DDB1-223ENST00000543658 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
DDB1-223ENST00000543658 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
DDB1-223ENST00000543658 MYO3AQ8NEV4 1616 aa17.28■□□□□ 0.36
DDB1-223ENST00000543658 TNRQ92752 1358 aa17.28■□□□□ 0.36
DDB1-223ENST00000543658 UGGT1Q9NYU2 1555 aa17.27■□□□□ 0.35
DDB1-223ENST00000543658 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
DDB1-223ENST00000543658 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
DDB1-223ENST00000543658 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
DDB1-223ENST00000543658 PLA2R1Q13018 1463 aa17.25■□□□□ 0.35
DDB1-223ENST00000543658 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
DDB1-223ENST00000543658 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
DDB1-223ENST00000543658 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
DDB1-223ENST00000543658 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
DDB1-223ENST00000543658 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
DDB1-223ENST00000543658 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
DDB1-223ENST00000543658 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
DDB1-223ENST00000543658 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
DDB1-223ENST00000543658 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
DDB1-223ENST00000543658 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
DDB1-223ENST00000543658 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
DDB1-223ENST00000543658 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
DDB1-223ENST00000543658 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
DDB1-223ENST00000543658 TMEM131LA2VDJ0 1609 aa17.19■□□□□ 0.34
DDB1-223ENST00000543658 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
DDB1-223ENST00000543658 UHRF1BP1Q6BDS2 1440 aa17.17■□□□□ 0.34
DDB1-223ENST00000543658 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
DDB1-223ENST00000543658 PPLO60437 1756 aa17.16■□□□□ 0.34
DDB1-223ENST00000543658 IDI1Q13907 227 aa17.16■□□□□ 0.34
DDB1-223ENST00000543658 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
DDB1-223ENST00000543658 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
DDB1-223ENST00000543658 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
DDB1-223ENST00000543658 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
DDB1-223ENST00000543658 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
DDB1-223ENST00000543658 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
DDB1-223ENST00000543658 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
DDB1-223ENST00000543658 POLR1AO95602 1720 aaPredicted RBP17.08■□□□□ 0.32
DDB1-223ENST00000543658 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms