RNA–Protein interactions for RNA: ENST00000543566.5

ARL6IP4-220, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-220ENST00000543566 YEATS2Q9ULM3 1422 aa30.49■■■□□ 2.47
ARL6IP4-220ENST00000543566 SLC4A1APQ9BWU0 796 aaKnown RBP30.48■■■□□ 2.47
ARL6IP4-220ENST00000543566 NUP155O75694 1391 aa30.46■■■□□ 2.47
ARL6IP4-220ENST00000543566 SIN3AQ96ST3 1273 aa30.45■■■□□ 2.46
ARL6IP4-220ENST00000543566 DEPDC5O75140 1603 aa30.43■■■□□ 2.46
ARL6IP4-220ENST00000543566 BCORL1Q5H9F3 1711 aa30.43■■■□□ 2.46
ARL6IP4-220ENST00000543566 TIMELESSQ9UNS1 1208 aa30.41■■■□□ 2.46
ARL6IP4-220ENST00000543566 IQGAP3Q86VI3 1631 aa30.41■■■□□ 2.46
ARL6IP4-220ENST00000543566 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
ARL6IP4-220ENST00000543566 NEUROD1Q13562 356 aa30.4■■■□□ 2.46
ARL6IP4-220ENST00000543566 FAM135AQ9P2D6 1515 aa30.4■■■□□ 2.46
ARL6IP4-220ENST00000543566 ATP10AO60312 1499 aa30.38■■■□□ 2.45
ARL6IP4-220ENST00000543566 ARHGEF40Q8TER5 1519 aa30.38■■■□□ 2.45
ARL6IP4-220ENST00000543566 ANKRD30BQ9BXX2 1392 aa30.36■■■□□ 2.45
ARL6IP4-220ENST00000543566 RNF17Q9BXT8 1623 aaKnown RBP30.36■■■□□ 2.45
ARL6IP4-220ENST00000543566 MROH1Q8NDA8 1641 aa30.35■■■□□ 2.45
ARL6IP4-220ENST00000543566 PRDM15P57071 1507 aaPredicted RBP30.35■■■□□ 2.45
ARL6IP4-220ENST00000543566 VWDEQ8N2E2 1590 aa30.34■■■□□ 2.45
ARL6IP4-220ENST00000543566 KIF3BO15066 747 aa30.33■■■□□ 2.45
ARL6IP4-220ENST00000543566 FOXD1Q16676 465 aa30.32■■■□□ 2.45
ARL6IP4-220ENST00000543566 PKD2Q13563 968 aa30.32■■■□□ 2.44
ARL6IP4-220ENST00000543566 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
ARL6IP4-220ENST00000543566 AGLP35573 1532 aa30.29■■■□□ 2.44
ARL6IP4-220ENST00000543566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.27■■■□□ 2.442e-7■■■□□ 14.9
ARL6IP4-220ENST00000543566 RPRD2Q5VT52 1461 aaKnown RBP30.26■■■□□ 2.43
ARL6IP4-220ENST00000543566 KANK1Q14678 1352 aa30.23■■■□□ 2.43
ARL6IP4-220ENST00000543566 LMTK2Q8IWU2 1503 aa30.21■■■□□ 2.43
ARL6IP4-220ENST00000543566 SIGLEC1Q9BZZ2 1709 aa30.21■■■□□ 2.43
ARL6IP4-220ENST00000543566 TET3O43151 1660 aa30.18■■■□□ 2.42
ARL6IP4-220ENST00000543566 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
ARL6IP4-220ENST00000543566 GGT6Q6P531 493 aa30.14■■■□□ 2.42
ARL6IP4-220ENST00000543566 ABCC3O15438 1527 aa30.13■■■□□ 2.41
ARL6IP4-220ENST00000543566 E9PCH4 1651 aa30.12■■■□□ 2.41
ARL6IP4-220ENST00000543566 EFCAB6Q5THR3 1501 aa30.1■■■□□ 2.41
ARL6IP4-220ENST00000543566 CEP152O94986 1710 aa30.1■■■□□ 2.41
ARL6IP4-220ENST00000543566 ZC3H13Q5T200 1668 aaKnown RBP30.1■■■□□ 2.41
ARL6IP4-220ENST00000543566 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
ARL6IP4-220ENST00000543566 PLA2R1Q13018 1463 aa30.07■■■□□ 2.4
ARL6IP4-220ENST00000543566 WASHC2CQ9Y4E1 1318 aa30.04■■■□□ 2.4
ARL6IP4-220ENST00000543566 SPHKAPQ2M3C7 1700 aa30.03■■■□□ 2.4
ARL6IP4-220ENST00000543566 CCDC144AA2RUR9 1427 aa30.03■■■□□ 2.4
ARL6IP4-220ENST00000543566 PTPRTO14522 1441 aa30.03■■■□□ 2.4
ARL6IP4-220ENST00000543566 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
ARL6IP4-220ENST00000543566 CAMSAP1Q5T5Y3 1602 aa30.02■■■□□ 2.4
ARL6IP4-220ENST00000543566 L3MBTL2Q969R5 705 aa30.02■■■□□ 2.4
ARL6IP4-220ENST00000543566 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
ARL6IP4-220ENST00000543566 NPATQ14207 1427 aa29.99■■■□□ 2.39
ARL6IP4-220ENST00000543566 TRPM2O94759 1503 aa29.99■■■□□ 2.39
ARL6IP4-220ENST00000543566 ARID4BQ4LE39 1312 aaPredicted RBP29.92■■■□□ 2.38
ARL6IP4-220ENST00000543566 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
ARL6IP4-220ENST00000543566 MLECQ14165 292 aa29.9■■■□□ 2.38
ARL6IP4-220ENST00000543566 NOS1P29475 1434 aa29.89■■■□□ 2.37
ARL6IP4-220ENST00000543566 CLTCL1P53675 1640 aa29.87■■■□□ 2.37
ARL6IP4-220ENST00000543566 CNTLNQ9NXG0 1405 aa29.87■■■□□ 2.37
ARL6IP4-220ENST00000543566 UHRF1BP1Q6BDS2 1440 aa29.81■■■□□ 2.36
ARL6IP4-220ENST00000543566 MROH2AA6NES4 1674 aa29.8■■■□□ 2.36
ARL6IP4-220ENST00000543566 PREX1Q8TCU6 1659 aa29.8■■■□□ 2.36
ARL6IP4-220ENST00000543566 NEURL4Q96JN8 1562 aa29.8■■■□□ 2.36
ARL6IP4-220ENST00000543566 SYNMO15061 1565 aa29.79■■■□□ 2.36
ARL6IP4-220ENST00000543566 SPATA31E1Q6ZUB1 1445 aa29.78■■■□□ 2.36
ARL6IP4-220ENST00000543566 ZMYM3Q14202 1370 aa29.78■■■□□ 2.36
ARL6IP4-220ENST00000543566 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
ARL6IP4-220ENST00000543566 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
ARL6IP4-220ENST00000543566 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
ARL6IP4-220ENST00000543566 ESF1Q9H501 851 aaKnown RBP29.77■■■□□ 2.36
ARL6IP4-220ENST00000543566 PIK3C2BO00750 1634 aa29.76■■■□□ 2.36
ARL6IP4-220ENST00000543566 SPATA31D1Q6ZQQ2 1576 aa29.76■■■□□ 2.35
ARL6IP4-220ENST00000543566 KIF1BO60333 1816 aa29.75■■■□□ 2.35
ARL6IP4-220ENST00000543566 FER1L4A9Z1Z3 1794 aa29.72■■■□□ 2.35
ARL6IP4-220ENST00000543566 DCAF11Q8TEB1 546 aa29.72■■■□□ 2.35
ARL6IP4-220ENST00000543566 CFAP65Q6ZU64 1925 aaKnown RBP29.72■■■□□ 2.35
ARL6IP4-220ENST00000543566 FBXO31Q5XUX0 539 aaPredicted RBP29.71■■■□□ 2.35
ARL6IP4-220ENST00000543566 RGL3Q3MIN7 710 aa29.7■■■□□ 2.35
ARL6IP4-220ENST00000543566 RALGAPBQ86X10 1494 aa29.7■■■□□ 2.34
ARL6IP4-220ENST00000543566 ADAMTSL3P82987 1691 aa29.69■■■□□ 2.34
ARL6IP4-220ENST00000543566 ADGRB3O60242 1522 aa29.68■■■□□ 2.34
ARL6IP4-220ENST00000543566 SLC52A1Q9NWF4 448 aa29.68■■■□□ 2.34
ARL6IP4-220ENST00000543566 ZNF326Q5BKZ1 582 aaKnown RBP29.66■■■□□ 2.34
ARL6IP4-220ENST00000543566 KDM2AQ9Y2K7 1162 aa29.66■■■□□ 2.34
ARL6IP4-220ENST00000543566 PRAG1Q86YV5 1406 aa29.66■■■□□ 2.34
ARL6IP4-220ENST00000543566 DIEXFQ68CQ4 756 aaKnown RBP29.65■■■□□ 2.34
ARL6IP4-220ENST00000543566 MADDQ8WXG6 1647 aa29.65■■■□□ 2.34
ARL6IP4-220ENST00000543566 TRPM1Q7Z4N2 1603 aa29.63■■■□□ 2.33
ARL6IP4-220ENST00000543566 C3P01024 1663 aa29.63■■■□□ 2.33
ARL6IP4-220ENST00000543566 IDI1Q13907 227 aa29.61■■■□□ 2.33
ARL6IP4-220ENST00000543566 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
ARL6IP4-220ENST00000543566 STAC3Q96MF2 364 aa29.6■■■□□ 2.33
ARL6IP4-220ENST00000543566 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
ARL6IP4-220ENST00000543566 RIMS1Q86UR5 1692 aaKnown RBP29.56■■■□□ 2.32
ARL6IP4-220ENST00000543566 HSPA5P11021 654 aaKnown RBP29.56■■■□□ 2.32
ARL6IP4-220ENST00000543566 TMEM131LA2VDJ0 1609 aa29.55■■■□□ 2.32
ARL6IP4-220ENST00000543566 TNRQ92752 1358 aa29.55■■■□□ 2.32
ARL6IP4-220ENST00000543566 MYOM2P54296 1465 aa29.54■■■□□ 2.32
ARL6IP4-220ENST00000543566 LAMC1P11047 1609 aa29.54■■■□□ 2.32
ARL6IP4-220ENST00000543566 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
ARL6IP4-220ENST00000543566 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
ARL6IP4-220ENST00000543566 ROCK2O75116 1388 aaKnown RBP29.5■■■□□ 2.31
ARL6IP4-220ENST00000543566 RPGRIP1LQ68CZ1 1315 aa29.5■■■□□ 2.31
ARL6IP4-220ENST00000543566 PPLO60437 1756 aa29.5■■■□□ 2.31
ARL6IP4-220ENST00000543566 USP47Q96K76 1375 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms