RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 DHX29Q7Z478 1369 aaKnown RBP18.44■□□□□ 0.54
PPME1-208ENST00000543525 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
PPME1-208ENST00000543525 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
PPME1-208ENST00000543525 CDC42BPBQ9Y5S2 1711 aa18.42■□□□□ 0.54
PPME1-208ENST00000543525 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
PPME1-208ENST00000543525 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
PPME1-208ENST00000543525 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
PPME1-208ENST00000543525 FAM135AQ9P2D6 1515 aa18.38■□□□□ 0.53
PPME1-208ENST00000543525 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
PPME1-208ENST00000543525 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
PPME1-208ENST00000543525 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
PPME1-208ENST00000543525 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
PPME1-208ENST00000543525 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
PPME1-208ENST00000543525 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
PPME1-208ENST00000543525 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
PPME1-208ENST00000543525 SYCP2Q9BX26 1530 aa18.34■□□□□ 0.53
PPME1-208ENST00000543525 UNC13BO14795 1591 aa18.34■□□□□ 0.53
PPME1-208ENST00000543525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.52
PPME1-208ENST00000543525 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
PPME1-208ENST00000543525 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
PPME1-208ENST00000543525 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
PPME1-208ENST00000543525 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
PPME1-208ENST00000543525 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
PPME1-208ENST00000543525 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
PPME1-208ENST00000543525 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
PPME1-208ENST00000543525 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
PPME1-208ENST00000543525 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
PPME1-208ENST00000543525 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
PPME1-208ENST00000543525 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
PPME1-208ENST00000543525 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
PPME1-208ENST00000543525 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
PPME1-208ENST00000543525 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.52
PPME1-208ENST00000543525 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.51
PPME1-208ENST00000543525 RALBP1Q15311 655 aa18.27■□□□□ 0.51
PPME1-208ENST00000543525 IQGAP3Q86VI3 1631 aa18.27■□□□□ 0.51
PPME1-208ENST00000543525 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
PPME1-208ENST00000543525 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
PPME1-208ENST00000543525 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
PPME1-208ENST00000543525 E9PCH4 1651 aa18.25■□□□□ 0.51
PPME1-208ENST00000543525 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
PPME1-208ENST00000543525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.511e-9■■■■□ 19.6
PPME1-208ENST00000543525 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
PPME1-208ENST00000543525 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
PPME1-208ENST00000543525 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
PPME1-208ENST00000543525 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
PPME1-208ENST00000543525 LAMC1P11047 1609 aa18.23■□□□□ 0.51
PPME1-208ENST00000543525 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
PPME1-208ENST00000543525 PLCH2O75038 1416 aa18.22■□□□□ 0.51
PPME1-208ENST00000543525 A2MP01023 1474 aa18.21■□□□□ 0.51
PPME1-208ENST00000543525 ATP10AO60312 1499 aa18.21■□□□□ 0.51
PPME1-208ENST00000543525 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
PPME1-208ENST00000543525 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
PPME1-208ENST00000543525 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
PPME1-208ENST00000543525 EFCAB2Q5VUJ9 269 aa18.2■□□□□ 0.5
PPME1-208ENST00000543525 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
PPME1-208ENST00000543525 GLI2P10070 1586 aa18.19■□□□□ 0.5
PPME1-208ENST00000543525 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
PPME1-208ENST00000543525 ZCCHC11Q5TAX3 1644 aaKnown RBP18.18■□□□□ 0.5
PPME1-208ENST00000543525 RNF123Q5XPI4 1314 aa18.18■□□□□ 0.5
PPME1-208ENST00000543525 PPRC1Q5VV67 1664 aaKnown RBP18.17■□□□□ 0.5
PPME1-208ENST00000543525 PRDM15P57071 1507 aaPredicted RBP18.17■□□□□ 0.5
PPME1-208ENST00000543525 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
PPME1-208ENST00000543525 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
PPME1-208ENST00000543525 B4GALNT3Q6L9W6 998 aa18.16■□□□□ 0.5
PPME1-208ENST00000543525 ABCC1P33527 1531 aa18.15■□□□□ 0.5
PPME1-208ENST00000543525 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
PPME1-208ENST00000543525 COL17A1Q9UMD9 1497 aaPredicted RBP18.15■□□□□ 0.5
PPME1-208ENST00000543525 PARD3Q8TEW0 1356 aa18.14■□□□□ 0.49
PPME1-208ENST00000543525 NLRP13Q86W25 1043 aa18.13■□□□□ 0.49
PPME1-208ENST00000543525 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
PPME1-208ENST00000543525 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 FBXO41Q8TF61 875 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
PPME1-208ENST00000543525 TMF1P82094 1093 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 TESK2Q96S53 571 aa18.1■□□□□ 0.49
PPME1-208ENST00000543525 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.49
PPME1-208ENST00000543525 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.48
PPME1-208ENST00000543525 RNF17Q9BXT8 1623 aaKnown RBP18.07■□□□□ 0.48
PPME1-208ENST00000543525 INSRP06213 1382 aa18.06■□□□□ 0.48
PPME1-208ENST00000543525 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
PPME1-208ENST00000543525 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
PPME1-208ENST00000543525 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
PPME1-208ENST00000543525 MSH5O43196 834 aa18.04■□□□□ 0.48
PPME1-208ENST00000543525 PANK3Q9H999 370 aa18.04■□□□□ 0.48
PPME1-208ENST00000543525 TRPM2O94759 1503 aa18.03■□□□□ 0.48
PPME1-208ENST00000543525 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
PPME1-208ENST00000543525 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
PPME1-208ENST00000543525 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.48
PPME1-208ENST00000543525 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.47
PPME1-208ENST00000543525 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
PPME1-208ENST00000543525 PTPRTO14522 1441 aa18.01■□□□□ 0.47
PPME1-208ENST00000543525 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
PPME1-208ENST00000543525 KANK1Q14678 1352 aa18■□□□□ 0.47
PPME1-208ENST00000543525 DEPDC5O75140 1603 aa18■□□□□ 0.47
PPME1-208ENST00000543525 CEP152O94986 1710 aa18■□□□□ 0.47
PPME1-208ENST00000543525 AFAP1Q8N556 730 aa18■□□□□ 0.47
PPME1-208ENST00000543525 SPHKAPQ2M3C7 1700 aa17.99■□□□□ 0.47
PPME1-208ENST00000543525 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms