RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RALBP1Q15311 655 aa8.8□□□□□ -1
SRGAP1-206ENST00000543397 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
SRGAP1-206ENST00000543397 CFTRP13569 1480 aa8.8□□□□□ -1
SRGAP1-206ENST00000543397 IPO8O15397 1037 aaKnown RBP8.79□□□□□ -1
SRGAP1-206ENST00000543397 STK31Q9BXU1 1019 aa8.79□□□□□ -1
SRGAP1-206ENST00000543397 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
SRGAP1-206ENST00000543397 RGS3P49796 1198 aa8.79□□□□□ -1
SRGAP1-206ENST00000543397 EVA1CP58658 441 aa8.79□□□□□ -1
SRGAP1-206ENST00000543397 GOLGA6L22H0YM25 854 aa8.78□□□□□ -1
SRGAP1-206ENST00000543397 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
SRGAP1-206ENST00000543397 EVC2Q86UK5 1308 aa8.78□□□□□ -1
SRGAP1-206ENST00000543397 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
SRGAP1-206ENST00000543397 KCTD17Q8N5Z5 321 aa8.77□□□□□ -1
SRGAP1-206ENST00000543397 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
SRGAP1-206ENST00000543397 COG3Q96JB2 828 aa8.77□□□□□ -1.01
SRGAP1-206ENST00000543397 SYNJ2O15056 1496 aa8.77□□□□□ -1.01
SRGAP1-206ENST00000543397 ATF3P18847 181 aa8.77□□□□□ -1.01
SRGAP1-206ENST00000543397 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-206ENST00000543397 KIF15Q9NS87 1388 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 LMOD3Q0VAK6 560 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 NAP1L2Q9ULW6 460 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 PRDM2Q13029 1718 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 PSME1Q06323 249 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 AFAP1Q8N556 730 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 ISY1Q9ULR0 285 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
SRGAP1-206ENST00000543397 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
SRGAP1-206ENST00000543397 ZNF644Q9H582 1327 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-206ENST00000543397 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
SRGAP1-206ENST00000543397 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-206ENST00000543397 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
SRGAP1-206ENST00000543397 CHMP3Q9Y3E7 222 aa8.74□□□□□ -1.01
SRGAP1-206ENST00000543397 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
SRGAP1-206ENST00000543397 APBB1O00213 710 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 C1orf141Q5JVX7 400 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 ARHGAP5Q13017 1502 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 TOPBP1Q92547 1522 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 G3V3G9 751 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 GORABQ5T7V8 394 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 DCAF8Q5TAQ9 597 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 PPP4R2Q9NY27 417 aa8.73□□□□□ -1.01
SRGAP1-206ENST00000543397 DNAJC5BQ9UF47 199 aa8.72□□□□□ -1.01
SRGAP1-206ENST00000543397 SNAPC4Q5SXM2 1469 aa8.71□□□□□ -1.01
SRGAP1-206ENST00000543397 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.01
SRGAP1-206ENST00000543397 STAC3Q96MF2 364 aa8.71□□□□□ -1.01
SRGAP1-206ENST00000543397 CUX1P39880 1505 aa8.71□□□□□ -1.01
SRGAP1-206ENST00000543397 MSH5O43196 834 aa8.71□□□□□ -1.02
SRGAP1-206ENST00000543397 TEFQ10587 303 aa8.71□□□□□ -1.02
SRGAP1-206ENST00000543397 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.02
SRGAP1-206ENST00000543397 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.02
SRGAP1-206ENST00000543397 MCCP23508 829 aa8.71□□□□□ -1.02
SRGAP1-206ENST00000543397 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 PATL2C9JE40 543 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 TXNDC2Q86VQ3 553 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 PANK3Q9H999 370 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 SMC4Q9NTJ3 1288 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 ANKRD50Q9ULJ7 1429 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 WDR70Q9NW82 654 aa8.7□□□□□ -1.02
SRGAP1-206ENST00000543397 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 CASKIN1Q8WXD9 1431 aa8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 TTC5Q8N0Z6 440 aa8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 SYTL4Q96C24 671 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 PHLDB1Q86UU1 1377 aa8.69□□□□□ -1.02
SRGAP1-206ENST00000543397 HMMRO75330 724 aa8.68□□□□□ -1.02
SRGAP1-206ENST00000543397 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-206ENST00000543397 FRAT2O75474 233 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-206ENST00000543397 FYCO1Q9BQS8 1478 aa8.68□□□□□ -1.02
SRGAP1-206ENST00000543397 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-206ENST00000543397 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 POGZQ7Z3K3 1410 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 USP47Q96K76 1375 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 SCAPERQ9BY12 1400 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 CLSTN1O94985 981 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
SRGAP1-206ENST00000543397 GPATCH3Q96I76 525 aa8.66□□□□□ -1.02
SRGAP1-206ENST00000543397 RWDD1Q9H446 243 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-206ENST00000543397 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
SRGAP1-206ENST00000543397 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
SRGAP1-206ENST00000543397 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 PLEKHH2Q8IVE3 1493 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 APPP05067 770 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 DNMBPQ6XZF7 1577 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 LRRC9Q6ZRR7 1453 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 GOLGA6L4A6NEF3 574 aa8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 RRP7AQ9Y3A4 280 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-206ENST00000543397 GPRASP1Q5JY77 1395 aa8.65□□□□□ -1.03
SRGAP1-206ENST00000543397 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.03
SRGAP1-206ENST00000543397 MYBBP1AQ9BQG0 1328 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-206ENST00000543397 TMEM132EQ6IEE7 984 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms