RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
RPS6KC1-206ENST00000543354 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
RPS6KC1-206ENST00000543354 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
RPS6KC1-206ENST00000543354 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
RPS6KC1-206ENST00000543354 NAP1L2Q9ULW6 460 aaPredicted RBP17.41■□□□□ 0.38
RPS6KC1-206ENST00000543354 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
RPS6KC1-206ENST00000543354 A0A0G2JS52 829 aa17.4■□□□□ 0.38
RPS6KC1-206ENST00000543354 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
RPS6KC1-206ENST00000543354 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
RPS6KC1-206ENST00000543354 FGD1P98174 961 aa17.39■□□□□ 0.37
RPS6KC1-206ENST00000543354 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
RPS6KC1-206ENST00000543354 GOLGA6L4A6NEF3 574 aa17.39■□□□□ 0.37
RPS6KC1-206ENST00000543354 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
RPS6KC1-206ENST00000543354 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
RPS6KC1-206ENST00000543354 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
RPS6KC1-206ENST00000543354 IGF1RP08069 1367 aa17.37■□□□□ 0.37
RPS6KC1-206ENST00000543354 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
RPS6KC1-206ENST00000543354 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
RPS6KC1-206ENST00000543354 DRC7Q8IY82 874 aa17.36■□□□□ 0.37
RPS6KC1-206ENST00000543354 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
RPS6KC1-206ENST00000543354 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
RPS6KC1-206ENST00000543354 UACAQ9BZF9 1416 aa17.33■□□□□ 0.37
RPS6KC1-206ENST00000543354 CHAF1AQ13111 956 aaPredicted RBP17.33■□□□□ 0.37
RPS6KC1-206ENST00000543354 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.37
RPS6KC1-206ENST00000543354 KIF3BO15066 747 aa17.33■□□□□ 0.36
RPS6KC1-206ENST00000543354 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.36
RPS6KC1-206ENST00000543354 BACH2Q9BYV9 841 aa17.33■□□□□ 0.36
RPS6KC1-206ENST00000543354 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
RPS6KC1-206ENST00000543354 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
RPS6KC1-206ENST00000543354 KIAA2012Q0VF49 1180 aa17.31■□□□□ 0.36
RPS6KC1-206ENST00000543354 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
RPS6KC1-206ENST00000543354 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
RPS6KC1-206ENST00000543354 E9PSI1 815 aa17.3■□□□□ 0.36
RPS6KC1-206ENST00000543354 MLECQ14165 292 aa17.3■□□□□ 0.36
RPS6KC1-206ENST00000543354 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
RPS6KC1-206ENST00000543354 MCCP23508 829 aa17.29■□□□□ 0.36
RPS6KC1-206ENST00000543354 TRIM6-TRIM34B2RNG4 842 aa17.28■□□□□ 0.36
RPS6KC1-206ENST00000543354 MAPKBP1O60336 1514 aa17.28■□□□□ 0.36
RPS6KC1-206ENST00000543354 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
RPS6KC1-206ENST00000543354 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
RPS6KC1-206ENST00000543354 FAM13BQ9NYF5 915 aa17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
RPS6KC1-206ENST00000543354 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
RPS6KC1-206ENST00000543354 BCAR3O75815 825 aa17.24■□□□□ 0.35
RPS6KC1-206ENST00000543354 KANK1Q14678 1352 aa17.24■□□□□ 0.35
RPS6KC1-206ENST00000543354 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
RPS6KC1-206ENST00000543354 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
RPS6KC1-206ENST00000543354 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
RPS6KC1-206ENST00000543354 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
RPS6KC1-206ENST00000543354 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
RPS6KC1-206ENST00000543354 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
RPS6KC1-206ENST00000543354 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
RPS6KC1-206ENST00000543354 C22orf23Q9BZE7 217 aa17.21■□□□□ 0.35
RPS6KC1-206ENST00000543354 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
RPS6KC1-206ENST00000543354 MYOM3Q5VTT5 1437 aa17.2■□□□□ 0.34
RPS6KC1-206ENST00000543354 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
RPS6KC1-206ENST00000543354 PTMSP20962 102 aa17.17■□□□□ 0.34
RPS6KC1-206ENST00000543354 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
RPS6KC1-206ENST00000543354 ST18O60284 1047 aa17.17■□□□□ 0.34
RPS6KC1-206ENST00000543354 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
RPS6KC1-206ENST00000543354 TRAK2O60296 914 aa17.17■□□□□ 0.34
RPS6KC1-206ENST00000543354 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
RPS6KC1-206ENST00000543354 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
RPS6KC1-206ENST00000543354 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
RPS6KC1-206ENST00000543354 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
RPS6KC1-206ENST00000543354 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 NRDCO43847 1150 aa17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 CFTRP13569 1480 aa17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
RPS6KC1-206ENST00000543354 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
RPS6KC1-206ENST00000543354 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
RPS6KC1-206ENST00000543354 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
RPS6KC1-206ENST00000543354 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
RPS6KC1-206ENST00000543354 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
RPS6KC1-206ENST00000543354 GOLGA6L6A8MZA4 724 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 MPNDQ8N594 471 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 RIPK4P57078 832 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
RPS6KC1-206ENST00000543354 SKOR2Q2VWA4 1001 aaPredicted RBP17.1■□□□□ 0.33
RPS6KC1-206ENST00000543354 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
RPS6KC1-206ENST00000543354 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
RPS6KC1-206ENST00000543354 HMMRO75330 724 aa17.1■□□□□ 0.33
RPS6KC1-206ENST00000543354 R3HCC1Q9Y3T6 440 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms