RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RIMS1Q86UR5 1692 aaKnown RBP25.84■■□□□ 1.73
RABGGTA-203ENST00000543002 PTPRMP28827 1452 aa25.84■■□□□ 1.73
RABGGTA-203ENST00000543002 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
RABGGTA-203ENST00000543002 NAIPQ13075 1403 aa25.8■■□□□ 1.72
RABGGTA-203ENST00000543002 FAM135AQ9P2D6 1515 aa25.8■■□□□ 1.72
RABGGTA-203ENST00000543002 MROH1Q8NDA8 1641 aa25.8■■□□□ 1.72
RABGGTA-203ENST00000543002 HFM1A2PYH4 1435 aa25.79■■□□□ 1.72
RABGGTA-203ENST00000543002 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
RABGGTA-203ENST00000543002 WASHC2CQ9Y4E1 1318 aa25.77■■□□□ 1.72
RABGGTA-203ENST00000543002 PRDM15P57071 1507 aaPredicted RBP25.77■■□□□ 1.72
RABGGTA-203ENST00000543002 KDM5DQ9BY66 1539 aa25.77■■□□□ 1.72
RABGGTA-203ENST00000543002 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
RABGGTA-203ENST00000543002 CLTCQ00610 1675 aaKnown RBP25.75■■□□□ 1.71
RABGGTA-203ENST00000543002 GCC2Q8IWJ2 1684 aa25.75■■□□□ 1.71
RABGGTA-203ENST00000543002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.75■■□□□ 1.712e-6■■■□□ 15.7
RABGGTA-203ENST00000543002 MROH2AA6NES4 1674 aa25.75■■□□□ 1.71
RABGGTA-203ENST00000543002 ZMYM3Q14202 1370 aa25.73■■□□□ 1.71
RABGGTA-203ENST00000543002 KANK1Q14678 1352 aa25.72■■□□□ 1.71
RABGGTA-203ENST00000543002 ABCC3O15438 1527 aa25.72■■□□□ 1.71
RABGGTA-203ENST00000543002 CEBPAP49715 358 aaPredicted RBP25.71■■□□□ 1.71
RABGGTA-203ENST00000543002 ZC3H13Q5T200 1668 aaKnown RBP25.71■■□□□ 1.71
RABGGTA-203ENST00000543002 UNC13BO14795 1591 aa25.7■■□□□ 1.7
RABGGTA-203ENST00000543002 VWDEQ8N2E2 1590 aa25.7■■□□□ 1.7
RABGGTA-203ENST00000543002 C3P01024 1663 aa25.7■■□□□ 1.7
RABGGTA-203ENST00000543002 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
RABGGTA-203ENST00000543002 CEP152O94986 1710 aa25.66■■□□□ 1.7
RABGGTA-203ENST00000543002 LMTK2Q8IWU2 1503 aa25.66■■□□□ 1.7
RABGGTA-203ENST00000543002 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
RABGGTA-203ENST00000543002 PZPP20742 1482 aa25.63■■□□□ 1.69
RABGGTA-203ENST00000543002 NUP155O75694 1391 aa25.63■■□□□ 1.69
RABGGTA-203ENST00000543002 CAMSAP1Q5T5Y3 1602 aa25.62■■□□□ 1.69
RABGGTA-203ENST00000543002 NPATQ14207 1427 aa25.61■■□□□ 1.69
RABGGTA-203ENST00000543002 ARHGAP31Q2M1Z3 1444 aa25.61■■□□□ 1.69
RABGGTA-203ENST00000543002 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
RABGGTA-203ENST00000543002 IQGAP3Q86VI3 1631 aa25.59■■□□□ 1.69
RABGGTA-203ENST00000543002 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
RABGGTA-203ENST00000543002 SETD1BQ9UPS6 1966 aaKnown RBP25.56■■□□□ 1.68
RABGGTA-203ENST00000543002 EFCAB6Q5THR3 1501 aa25.55■■□□□ 1.68
RABGGTA-203ENST00000543002 TET3O43151 1660 aa25.55■■□□□ 1.68
RABGGTA-203ENST00000543002 TRIM52Q96A61 297 aa25.55■■□□□ 1.68
RABGGTA-203ENST00000543002 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
RABGGTA-203ENST00000543002 RAB3GAP2Q9H2M9 1393 aa25.54■■□□□ 1.68
RABGGTA-203ENST00000543002 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
RABGGTA-203ENST00000543002 SPATA31D1Q6ZQQ2 1576 aa25.5■■□□□ 1.67
RABGGTA-203ENST00000543002 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
RABGGTA-203ENST00000543002 TNRQ92752 1358 aa25.5■■□□□ 1.67
RABGGTA-203ENST00000543002 HRCP23327 699 aa25.49■■□□□ 1.67
RABGGTA-203ENST00000543002 UHRF1BP1Q6BDS2 1440 aa25.48■■□□□ 1.67
RABGGTA-203ENST00000543002 PREX1Q8TCU6 1659 aa25.48■■□□□ 1.67
RABGGTA-203ENST00000543002 CFAP65Q6ZU64 1925 aaKnown RBP25.46■■□□□ 1.67
RABGGTA-203ENST00000543002 E9PCH4 1651 aa25.45■■□□□ 1.67
RABGGTA-203ENST00000543002 LMTK3Q96Q04 1460 aa25.45■■□□□ 1.67
RABGGTA-203ENST00000543002 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
RABGGTA-203ENST00000543002 NOS1P29475 1434 aa25.44■■□□□ 1.66
RABGGTA-203ENST00000543002 MYO3AQ8NEV4 1616 aa25.43■■□□□ 1.66
RABGGTA-203ENST00000543002 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
RABGGTA-203ENST00000543002 PKD2Q13563 968 aa25.39■■□□□ 1.66
RABGGTA-203ENST00000543002 MPHOSPH9Q99550 1183 aa25.39■■□□□ 1.66
RABGGTA-203ENST00000543002 SYNMO15061 1565 aa25.38■■□□□ 1.65
RABGGTA-203ENST00000543002 CEP170BQ9Y4F5 1589 aaPredicted RBP25.38■■□□□ 1.65
RABGGTA-203ENST00000543002 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
RABGGTA-203ENST00000543002 ZNF142P52746 1687 aaPredicted RBP25.37■■□□□ 1.65
RABGGTA-203ENST00000543002 PTPRTO14522 1441 aa25.35■■□□□ 1.65
RABGGTA-203ENST00000543002 HSPA2P54652 639 aa25.35■■□□□ 1.65
RABGGTA-203ENST00000543002 SLC52A1Q9NWF4 448 aa25.35■■□□□ 1.65
RABGGTA-203ENST00000543002 IDI1Q13907 227 aa25.33■■□□□ 1.64
RABGGTA-203ENST00000543002 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
RABGGTA-203ENST00000543002 UGGT1Q9NYU2 1555 aa25.29■■□□□ 1.64
RABGGTA-203ENST00000543002 FOXD1Q16676 465 aa25.28■■□□□ 1.64
RABGGTA-203ENST00000543002 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
RABGGTA-203ENST00000543002 PIK3C2BO00750 1634 aa25.28■■□□□ 1.64
RABGGTA-203ENST00000543002 THEMISQ8N1K5 641 aaPredicted RBP25.27■■□□□ 1.64
RABGGTA-203ENST00000543002 TRPM2O94759 1503 aa25.26■■□□□ 1.63
RABGGTA-203ENST00000543002 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
RABGGTA-203ENST00000543002 UBR1Q8IWV7 1749 aa25.24■■□□□ 1.63
RABGGTA-203ENST00000543002 STAG3Q9UJ98 1225 aa25.24■■□□□ 1.63
RABGGTA-203ENST00000543002 KDM5AP29375 1690 aaKnown RBP25.23■■□□□ 1.63
RABGGTA-203ENST00000543002 ADGRB3O60242 1522 aa25.21■■□□□ 1.63
RABGGTA-203ENST00000543002 CLTCL1P53675 1640 aa25.19■■□□□ 1.62
RABGGTA-203ENST00000543002 TMEM131LA2VDJ0 1609 aa25.17■■□□□ 1.62
RABGGTA-203ENST00000543002 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
RABGGTA-203ENST00000543002 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
RABGGTA-203ENST00000543002 SLIT1O75093 1534 aa25.15■■□□□ 1.62
RABGGTA-203ENST00000543002 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
RABGGTA-203ENST00000543002 STRCQ7RTU9 1775 aa25.15■■□□□ 1.62
RABGGTA-203ENST00000543002 ANKRD30BQ9BXX2 1392 aa25.14■■□□□ 1.62
RABGGTA-203ENST00000543002 TMEM2Q9UHN6 1383 aa25.14■■□□□ 1.62
RABGGTA-203ENST00000543002 ANKLE2Q86XL3 938 aa25.14■■□□□ 1.62
RABGGTA-203ENST00000543002 NCKAP5LQ9HCH0 1330 aa25.13■■□□□ 1.61
RABGGTA-203ENST00000543002 MYO5BQ9ULV0 1848 aa25.11■■□□□ 1.61
RABGGTA-203ENST00000543002 KIF1BO60333 1816 aa25.1■■□□□ 1.61
RABGGTA-203ENST00000543002 TXNDC2Q86VQ3 553 aa25.09■■□□□ 1.61
RABGGTA-203ENST00000543002 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
RABGGTA-203ENST00000543002 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
RABGGTA-203ENST00000543002 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
RABGGTA-203ENST00000543002 SCAF11Q99590 1463 aaKnown RBP25.08■■□□□ 1.61
RABGGTA-203ENST00000543002 LTKP29376 864 aa25.08■■□□□ 1.6
RABGGTA-203ENST00000543002 POLR1AO95602 1720 aaPredicted RBP25.07■■□□□ 1.6
RABGGTA-203ENST00000543002 ZFYVE9O95405 1425 aa25.06■■□□□ 1.6
RABGGTA-203ENST00000543002 RIMS2Q9UQ26 1411 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms