RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 VWDEQ8N2E2 1590 aa16.05■□□□□ 0.16
NPIPB3-210ENST00000542817 UNC13BO14795 1591 aa16.04■□□□□ 0.16
NPIPB3-210ENST00000542817 PRDM15P57071 1507 aaPredicted RBP16.03■□□□□ 0.16
NPIPB3-210ENST00000542817 HRCP23327 699 aa16.02■□□□□ 0.16
NPIPB3-210ENST00000542817 MLECQ14165 292 aa16.02■□□□□ 0.16
NPIPB3-210ENST00000542817 GGT6Q6P531 493 aa16.02■□□□□ 0.16
NPIPB3-210ENST00000542817 ARID4BQ4LE39 1312 aaPredicted RBP16.02■□□□□ 0.15
NPIPB3-210ENST00000542817 ADAMTSL3P82987 1691 aa16.01■□□□□ 0.15
NPIPB3-210ENST00000542817 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
NPIPB3-210ENST00000542817 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
NPIPB3-210ENST00000542817 PZPP20742 1482 aa15.99■□□□□ 0.15
NPIPB3-210ENST00000542817 ABCC3O15438 1527 aa15.99■□□□□ 0.15
NPIPB3-210ENST00000542817 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
NPIPB3-210ENST00000542817 LMTK2Q8IWU2 1503 aa15.98■□□□□ 0.15
NPIPB3-210ENST00000542817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
NPIPB3-210ENST00000542817 NUP155O75694 1391 aa15.97■□□□□ 0.15
NPIPB3-210ENST00000542817 IQGAP3Q86VI3 1631 aa15.96■□□□□ 0.15
NPIPB3-210ENST00000542817 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
NPIPB3-210ENST00000542817 FAM135AQ9P2D6 1515 aa15.95■□□□□ 0.14
NPIPB3-210ENST00000542817 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
NPIPB3-210ENST00000542817 CEP152O94986 1710 aa15.92■□□□□ 0.14
NPIPB3-210ENST00000542817 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
NPIPB3-210ENST00000542817 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
NPIPB3-210ENST00000542817 FER1L4A9Z1Z3 1794 aa15.91■□□□□ 0.14
NPIPB3-210ENST00000542817 NPATQ14207 1427 aa15.91■□□□□ 0.14
NPIPB3-210ENST00000542817 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
NPIPB3-210ENST00000542817 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
NPIPB3-210ENST00000542817 MPHOSPH9Q99550 1183 aa15.91■□□□□ 0.14
NPIPB3-210ENST00000542817 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
NPIPB3-210ENST00000542817 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
NPIPB3-210ENST00000542817 KANK1Q14678 1352 aa15.9■□□□□ 0.14
NPIPB3-210ENST00000542817 EFCAB6Q5THR3 1501 aa15.9■□□□□ 0.14
NPIPB3-210ENST00000542817 CAMSAP1Q5T5Y3 1602 aa15.89■□□□□ 0.13
NPIPB3-210ENST00000542817 TET3O43151 1660 aa15.89■□□□□ 0.13
NPIPB3-210ENST00000542817 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
NPIPB3-210ENST00000542817 MROH2AA6NES4 1674 aa15.88■□□□□ 0.13
NPIPB3-210ENST00000542817 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
NPIPB3-210ENST00000542817 PTPRMP28827 1452 aa15.88■□□□□ 0.13
NPIPB3-210ENST00000542817 PLA2R1Q13018 1463 aa15.88■□□□□ 0.13
NPIPB3-210ENST00000542817 E9PCH4 1651 aa15.87■□□□□ 0.13
NPIPB3-210ENST00000542817 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
NPIPB3-210ENST00000542817 C3P01024 1663 aa15.87■□□□□ 0.13
NPIPB3-210ENST00000542817 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
NPIPB3-210ENST00000542817 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
NPIPB3-210ENST00000542817 PKD2Q13563 968 aa15.86■□□□□ 0.13
NPIPB3-210ENST00000542817 FOXD1Q16676 465 aa15.86■□□□□ 0.13
NPIPB3-210ENST00000542817 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
NPIPB3-210ENST00000542817 NOS1P29475 1434 aa15.85■□□□□ 0.13
NPIPB3-210ENST00000542817 PTPRTO14522 1441 aa15.84■□□□□ 0.13
NPIPB3-210ENST00000542817 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
NPIPB3-210ENST00000542817 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
NPIPB3-210ENST00000542817 ERVK-7P63135 1459 aa15.82■□□□□ 0.12
NPIPB3-210ENST00000542817 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
NPIPB3-210ENST00000542817 SYNMO15061 1565 aa15.81■□□□□ 0.12
NPIPB3-210ENST00000542817 ANKRD30BQ9BXX2 1392 aa15.8■□□□□ 0.12
NPIPB3-210ENST00000542817 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
NPIPB3-210ENST00000542817 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
NPIPB3-210ENST00000542817 UGGT1Q9NYU2 1555 aa15.77■□□□□ 0.11
NPIPB3-210ENST00000542817 TRPM2O94759 1503 aa15.76■□□□□ 0.11
NPIPB3-210ENST00000542817 TNRQ92752 1358 aa15.76■□□□□ 0.11
NPIPB3-210ENST00000542817 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
NPIPB3-210ENST00000542817 PIK3C2BO00750 1634 aa15.75■□□□□ 0.11
NPIPB3-210ENST00000542817 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
NPIPB3-210ENST00000542817 IDI1Q13907 227 aa15.74■□□□□ 0.11
NPIPB3-210ENST00000542817 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
NPIPB3-210ENST00000542817 SLC52A1Q9NWF4 448 aa15.7■□□□□ 0.1
NPIPB3-210ENST00000542817 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
NPIPB3-210ENST00000542817 MYO3AQ8NEV4 1616 aa15.7■□□□□ 0.1
NPIPB3-210ENST00000542817 NLRP1Q9C000 1473 aa15.69■□□□□ 0.1
NPIPB3-210ENST00000542817 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
NPIPB3-210ENST00000542817 SPATA31E1Q6ZUB1 1445 aa15.68■□□□□ 0.1
NPIPB3-210ENST00000542817 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
NPIPB3-210ENST00000542817 TMEM131LA2VDJ0 1609 aa15.67■□□□□ 0.1
NPIPB3-210ENST00000542817 CCDC144AA2RUR9 1427 aa15.66■□□□□ 0.1
NPIPB3-210ENST00000542817 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
NPIPB3-210ENST00000542817 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
NPIPB3-210ENST00000542817 ADGRB3O60242 1522 aa15.65■□□□□ 0.1
NPIPB3-210ENST00000542817 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
NPIPB3-210ENST00000542817 UBR1Q8IWV7 1749 aa15.64■□□□□ 0.09
NPIPB3-210ENST00000542817 UHRF1BP1Q6BDS2 1440 aa15.64■□□□□ 0.09
NPIPB3-210ENST00000542817 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
NPIPB3-210ENST00000542817 NEURL4Q96JN8 1562 aa15.62■□□□□ 0.09
NPIPB3-210ENST00000542817 KDM5AP29375 1690 aaKnown RBP15.62■□□□□ 0.09
NPIPB3-210ENST00000542817 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
NPIPB3-210ENST00000542817 ARHGAP23Q9P227 1491 aa15.6■□□□□ 0.09
NPIPB3-210ENST00000542817 MYO5BQ9ULV0 1848 aa15.6■□□□□ 0.09
NPIPB3-210ENST00000542817 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
NPIPB3-210ENST00000542817 TMEM2Q9UHN6 1383 aa15.59■□□□□ 0.09
NPIPB3-210ENST00000542817 SLIT1O75093 1534 aa15.58■□□□□ 0.09
NPIPB3-210ENST00000542817 KIF1BO60333 1816 aa15.57■□□□□ 0.08
NPIPB3-210ENST00000542817 LTKP29376 864 aa15.57■□□□□ 0.08
NPIPB3-210ENST00000542817 HSPA2P54652 639 aa15.57■□□□□ 0.08
NPIPB3-210ENST00000542817 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
NPIPB3-210ENST00000542817 NEXMIFQ5QGS0 1516 aa15.57■□□□□ 0.08
NPIPB3-210ENST00000542817 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
NPIPB3-210ENST00000542817 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
NPIPB3-210ENST00000542817 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
NPIPB3-210ENST00000542817 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
NPIPB3-210ENST00000542817 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
NPIPB3-210ENST00000542817 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms