RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 BCORL1Q5H9F3 1711 aa34.36■■■■□ 3.09
HOMER3-205ENST00000542541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.33■■■■□ 3.09
HOMER3-205ENST00000542541 PPP6R1Q9UPN7 881 aa34.33■■■■□ 3.09
HOMER3-205ENST00000542541 TRIM52Q96A61 297 aa34.32■■■■□ 3.08
HOMER3-205ENST00000542541 MLECQ14165 292 aa34.31■■■■□ 3.08
HOMER3-205ENST00000542541 KANK1Q14678 1352 aa34.3■■■■□ 3.08
HOMER3-205ENST00000542541 RNF17Q9BXT8 1623 aaKnown RBP34.28■■■■□ 3.08
HOMER3-205ENST00000542541 NUP155O75694 1391 aa34.28■■■■□ 3.08
HOMER3-205ENST00000542541 ADAMTSL3P82987 1691 aa34.26■■■■□ 3.07
HOMER3-205ENST00000542541 DEPDC5O75140 1603 aa34.25■■■■□ 3.07
HOMER3-205ENST00000542541 UNC13BO14795 1591 aa34.24■■■■□ 3.07
HOMER3-205ENST00000542541 ESF1Q9H501 851 aaKnown RBP34.23■■■■□ 3.07
HOMER3-205ENST00000542541 PRDM15P57071 1507 aaPredicted RBP34.23■■■■□ 3.07
HOMER3-205ENST00000542541 WASHC2CQ9Y4E1 1318 aa34.22■■■■□ 3.07
HOMER3-205ENST00000542541 MROH1Q8NDA8 1641 aa34.2■■■■□ 3.07
HOMER3-205ENST00000542541 FAM135AQ9P2D6 1515 aa34.17■■■■□ 3.06
HOMER3-205ENST00000542541 MADDQ8WXG6 1647 aa34.17■■■■□ 3.06
HOMER3-205ENST00000542541 KDM4FA0A1W2PPD8 638 aa34.16■■■■□ 3.06
HOMER3-205ENST00000542541 KDM5DQ9BY66 1539 aa34.15■■■■□ 3.06
HOMER3-205ENST00000542541 VWDEQ8N2E2 1590 aa34.15■■■■□ 3.06
HOMER3-205ENST00000542541 FER1L4A9Z1Z3 1794 aa34.14■■■■□ 3.06
HOMER3-205ENST00000542541 SLC4A1APQ9BWU0 796 aaKnown RBP34.13■■■■□ 3.05
HOMER3-205ENST00000542541 CNTLNQ9NXG0 1405 aa34.12■■■■□ 3.05
HOMER3-205ENST00000542541 MPHOSPH9Q99550 1183 aa34.11■■■■□ 3.05
HOMER3-205ENST00000542541 IQGAP3Q86VI3 1631 aa34.11■■■■□ 3.05
HOMER3-205ENST00000542541 ABCC3O15438 1527 aa34.09■■■■□ 3.05
HOMER3-205ENST00000542541 LMTK2Q8IWU2 1503 aa34.09■■■■□ 3.05
HOMER3-205ENST00000542541 PZPP20742 1482 aa34.07■■■■□ 3.05
HOMER3-205ENST00000542541 ZC3H13Q5T200 1668 aaKnown RBP34.07■■■■□ 3.05
HOMER3-205ENST00000542541 RIMS1Q86UR5 1692 aaKnown RBP34.07■■■■□ 3.05
HOMER3-205ENST00000542541 PKD2Q13563 968 aa34.02■■■■□ 3.04
HOMER3-205ENST00000542541 ZMYM3Q14202 1370 aa34.01■■■■□ 3.03
HOMER3-205ENST00000542541 CEP152O94986 1710 aa34■■■■□ 3.03
HOMER3-205ENST00000542541 TET3O43151 1660 aa34■■■■□ 3.03
HOMER3-205ENST00000542541 CLTCQ00610 1675 aaKnown RBP34■■■■□ 3.03
HOMER3-205ENST00000542541 ARHGAP31Q2M1Z3 1444 aa33.99■■■■□ 3.03
HOMER3-205ENST00000542541 EFCAB6Q5THR3 1501 aa33.96■■■■□ 3.03
HOMER3-205ENST00000542541 MROH2AA6NES4 1674 aa33.95■■■■□ 3.03
HOMER3-205ENST00000542541 CAMSAP1Q5T5Y3 1602 aa33.95■■■■□ 3.03
HOMER3-205ENST00000542541 DHX57Q6P158 1386 aaKnown RBP33.94■■■■□ 3.02
HOMER3-205ENST00000542541 RPRD2Q5VT52 1461 aaKnown RBP33.94■■■■□ 3.02
HOMER3-205ENST00000542541 PTPRMP28827 1452 aa33.93■■■■□ 3.02
HOMER3-205ENST00000542541 NPATQ14207 1427 aa33.92■■■■□ 3.02
HOMER3-205ENST00000542541 C3P01024 1663 aa33.91■■■■□ 3.02
HOMER3-205ENST00000542541 FOXD1Q16676 465 aa33.88■■■■□ 3.01
HOMER3-205ENST00000542541 E9PCH4 1651 aa33.86■■■■□ 3.01
HOMER3-205ENST00000542541 CEBPAP49715 358 aaPredicted RBP33.86■■■■□ 3.01
HOMER3-205ENST00000542541 FBXO31Q5XUX0 539 aaPredicted RBP33.83■■■■□ 3.01
HOMER3-205ENST00000542541 PLPPR3Q6T4P5 718 aa33.81■■■■□ 3
HOMER3-205ENST00000542541 CCER1Q8TC90 406 aaPredicted RBP33.81■■■■□ 3
HOMER3-205ENST00000542541 PTPRTO14522 1441 aa33.79■■■■□ 3
HOMER3-205ENST00000542541 ERVK-7P63135 1459 aa33.78■■■■□ 3
HOMER3-205ENST00000542541 NOS1P29475 1434 aa33.78■■■■□ 3
HOMER3-205ENST00000542541 ANKRD30BQ9BXX2 1392 aa33.77■■■■□ 3
HOMER3-205ENST00000542541 SPATA31D1Q6ZQQ2 1576 aa33.74■■■□□ 2.99
HOMER3-205ENST00000542541 CLSPNQ9HAW4 1339 aa33.73■■■□□ 2.99
HOMER3-205ENST00000542541 PREX1Q8TCU6 1659 aa33.73■■■□□ 2.99
HOMER3-205ENST00000542541 SLC52A1Q9NWF4 448 aa33.72■■■□□ 2.99
HOMER3-205ENST00000542541 TNRQ92752 1358 aa33.72■■■□□ 2.99
HOMER3-205ENST00000542541 PLA2R1Q13018 1463 aa33.72■■■□□ 2.99
HOMER3-205ENST00000542541 CFAP65Q6ZU64 1925 aaKnown RBP33.71■■■□□ 2.99
HOMER3-205ENST00000542541 TRPM2O94759 1503 aa33.69■■■□□ 2.98
HOMER3-205ENST00000542541 SPHKAPQ2M3C7 1700 aa33.69■■■□□ 2.98
HOMER3-205ENST00000542541 CCDC144AA2RUR9 1427 aa33.68■■■□□ 2.98
HOMER3-205ENST00000542541 SYNMO15061 1565 aa33.64■■■□□ 2.98
HOMER3-205ENST00000542541 IDI1Q13907 227 aa33.63■■■□□ 2.97
HOMER3-205ENST00000542541 SETD1BQ9UPS6 1966 aaKnown RBP33.61■■■□□ 2.97
HOMER3-205ENST00000542541 NLRP1Q9C000 1473 aa33.6■■■□□ 2.97
HOMER3-205ENST00000542541 SIN3AQ96ST3 1273 aa33.57■■■□□ 2.96
HOMER3-205ENST00000542541 UGGT1Q9NYU2 1555 aa33.56■■■□□ 2.96
HOMER3-205ENST00000542541 MYO3AQ8NEV4 1616 aa33.55■■■□□ 2.96
HOMER3-205ENST00000542541 STAG3Q9UJ98 1225 aa33.55■■■□□ 2.96
HOMER3-205ENST00000542541 PIK3C2BO00750 1634 aa33.55■■■□□ 2.96
HOMER3-205ENST00000542541 CLTCL1P53675 1640 aa33.54■■■□□ 2.96
HOMER3-205ENST00000542541 NEUROD1Q13562 356 aa33.53■■■□□ 2.96
HOMER3-205ENST00000542541 AEBP2Q6ZN18 517 aaPredicted RBP33.53■■■□□ 2.96
HOMER3-205ENST00000542541 CHGAP10645 457 aaKnown RBP33.53■■■□□ 2.96
HOMER3-205ENST00000542541 UHRF1BP1Q6BDS2 1440 aa33.5■■■□□ 2.95
HOMER3-205ENST00000542541 ZNF142P52746 1687 aaPredicted RBP33.49■■■□□ 2.95
HOMER3-205ENST00000542541 LMTK3Q96Q04 1460 aa33.48■■■□□ 2.95
HOMER3-205ENST00000542541 A2ML1A8K2U0 1454 aa33.48■■■□□ 2.95
HOMER3-205ENST00000542541 THEMISQ8N1K5 641 aaPredicted RBP33.44■■■□□ 2.94
HOMER3-205ENST00000542541 SPATA31E1Q6ZUB1 1445 aa33.42■■■□□ 2.94
HOMER3-205ENST00000542541 CEP170BQ9Y4F5 1589 aaPredicted RBP33.42■■■□□ 2.94
HOMER3-205ENST00000542541 KIF1BO60333 1816 aa33.42■■■□□ 2.94
HOMER3-205ENST00000542541 RGL3Q3MIN7 710 aa33.42■■■□□ 2.94
HOMER3-205ENST00000542541 ZNF326Q5BKZ1 582 aaKnown RBP33.42■■■□□ 2.94
HOMER3-205ENST00000542541 ADGRB3O60242 1522 aa33.42■■■□□ 2.94
HOMER3-205ENST00000542541 NEURL4Q96JN8 1562 aa33.4■■■□□ 2.94
HOMER3-205ENST00000542541 TMEM131LA2VDJ0 1609 aa33.39■■■□□ 2.94
HOMER3-205ENST00000542541 KDM5AP29375 1690 aaKnown RBP33.39■■■□□ 2.94
HOMER3-205ENST00000542541 TIMELESSQ9UNS1 1208 aa33.38■■■□□ 2.93
HOMER3-205ENST00000542541 RPGRIP1LQ68CZ1 1315 aa33.37■■■□□ 2.93
HOMER3-205ENST00000542541 TONSLQ96HA7 1378 aa33.37■■■□□ 2.93
HOMER3-205ENST00000542541 HDGFP51858 240 aaKnown RBP33.35■■■□□ 2.93
HOMER3-205ENST00000542541 UBR1Q8IWV7 1749 aa33.34■■■□□ 2.93
HOMER3-205ENST00000542541 TMEM2Q9UHN6 1383 aa33.31■■■□□ 2.92
HOMER3-205ENST00000542541 STAC3Q96MF2 364 aa33.31■■■□□ 2.92
HOMER3-205ENST00000542541 L3MBTL2Q969R5 705 aa33.3■■■□□ 2.92
HOMER3-205ENST00000542541 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms