RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 PKD2Q13563 968 aa30.02■■■□□ 2.4
CERS1-202ENST00000542296 RPRD2Q5VT52 1461 aaKnown RBP30.01■■■□□ 2.39
CERS1-202ENST00000542296 TSPOAP1O95153 1857 aa30■■■□□ 2.39
CERS1-202ENST00000542296 TONSLQ96HA7 1378 aa30■■■□□ 2.39
CERS1-202ENST00000542296 PPP1R15AO75807 674 aaPredicted RBP29.96■■■□□ 2.39
CERS1-202ENST00000542296 FRMPD1Q5SYB0 1578 aa29.95■■■□□ 2.39
CERS1-202ENST00000542296 RAPGEF3O95398 923 aa29.94■■■□□ 2.38
CERS1-202ENST00000542296 A2MP01023 1474 aa29.94■■■□□ 2.38
CERS1-202ENST00000542296 ABCA6Q8N139 1617 aa29.94■■■□□ 2.38
CERS1-202ENST00000542296 MYT1LQ9UL68 1186 aa29.93■■■□□ 2.38
CERS1-202ENST00000542296 BCORL1Q5H9F3 1711 aa29.93■■■□□ 2.38
CERS1-202ENST00000542296 ZMYM4Q5VZL5 1548 aa29.93■■■□□ 2.38
CERS1-202ENST00000542296 VWDEQ8N2E2 1590 aa29.92■■■□□ 2.38
CERS1-202ENST00000542296 PRDM15P57071 1507 aaPredicted RBP29.9■■■□□ 2.38
CERS1-202ENST00000542296 MROH1Q8NDA8 1641 aa29.89■■■□□ 2.38
CERS1-202ENST00000542296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.88■■■□□ 2.37
CERS1-202ENST00000542296 DIP2CQ9Y2E4 1556 aa29.88■■■□□ 2.37
CERS1-202ENST00000542296 RNF17Q9BXT8 1623 aaKnown RBP29.88■■■□□ 2.37
CERS1-202ENST00000542296 DIEXFQ68CQ4 756 aaKnown RBP29.84■■■□□ 2.37
CERS1-202ENST00000542296 ATP10AO60312 1499 aa29.84■■■□□ 2.37
CERS1-202ENST00000542296 KIF3BO15066 747 aa29.84■■■□□ 2.37
CERS1-202ENST00000542296 TET3O43151 1660 aa29.82■■■□□ 2.36
CERS1-202ENST00000542296 KANK1Q14678 1352 aa29.8■■■□□ 2.36
CERS1-202ENST00000542296 PLA2R1Q13018 1463 aa29.79■■■□□ 2.36
CERS1-202ENST00000542296 E9PCH4 1651 aa29.79■■■□□ 2.36
CERS1-202ENST00000542296 L3MBTL2Q969R5 705 aa29.79■■■□□ 2.36
CERS1-202ENST00000542296 DNAJC5Q9H3Z4 198 aa29.77■■■□□ 2.36
CERS1-202ENST00000542296 YEATS2Q9ULM3 1422 aa29.77■■■□□ 2.36
CERS1-202ENST00000542296 LMTK2Q8IWU2 1503 aa29.76■■■□□ 2.36
CERS1-202ENST00000542296 COL17A1Q9UMD9 1497 aaPredicted RBP29.73■■■□□ 2.35
CERS1-202ENST00000542296 REREQ9P2R6 1566 aa29.72■■■□□ 2.35
CERS1-202ENST00000542296 CCDC144AA2RUR9 1427 aa29.7■■■□□ 2.35
CERS1-202ENST00000542296 PTPRTO14522 1441 aa29.69■■■□□ 2.34
CERS1-202ENST00000542296 EFCAB6Q5THR3 1501 aa29.69■■■□□ 2.34
CERS1-202ENST00000542296 SPHKAPQ2M3C7 1700 aa29.68■■■□□ 2.34
CERS1-202ENST00000542296 TRPM2O94759 1503 aa29.66■■■□□ 2.34
CERS1-202ENST00000542296 CEP152O94986 1710 aa29.66■■■□□ 2.34
CERS1-202ENST00000542296 AGLP35573 1532 aa29.62■■■□□ 2.33
CERS1-202ENST00000542296 ABCC3O15438 1527 aa29.6■■■□□ 2.33
CERS1-202ENST00000542296 ARHGEF40Q8TER5 1519 aa29.6■■■□□ 2.33
CERS1-202ENST00000542296 ZC3H13Q5T200 1668 aaKnown RBP29.59■■■□□ 2.33
CERS1-202ENST00000542296 GGT6Q6P531 493 aa29.57■■■□□ 2.32
CERS1-202ENST00000542296 UHRF1BP1Q6BDS2 1440 aa29.57■■■□□ 2.32
CERS1-202ENST00000542296 NBPF8Q3BBV2 869 aa29.55■■■□□ 2.32
CERS1-202ENST00000542296 CAMSAP1Q5T5Y3 1602 aa29.54■■■□□ 2.32
CERS1-202ENST00000542296 CLTCL1P53675 1640 aa29.53■■■□□ 2.32
CERS1-202ENST00000542296 NEURL4Q96JN8 1562 aa29.53■■■□□ 2.32
CERS1-202ENST00000542296 WASHC2CQ9Y4E1 1318 aa29.52■■■□□ 2.32
CERS1-202ENST00000542296 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
CERS1-202ENST00000542296 NPATQ14207 1427 aa29.51■■■□□ 2.31
CERS1-202ENST00000542296 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
CERS1-202ENST00000542296 SIGLEC1Q9BZZ2 1709 aa29.49■■■□□ 2.31
CERS1-202ENST00000542296 PPP6R1Q9UPN7 881 aa29.47■■■□□ 2.31
CERS1-202ENST00000542296 CNTLNQ9NXG0 1405 aa29.44■■■□□ 2.3
CERS1-202ENST00000542296 TRHP20396 242 aaPredicted RBP29.43■■■□□ 2.3
CERS1-202ENST00000542296 DCAF11Q8TEB1 546 aa29.43■■■□□ 2.3
CERS1-202ENST00000542296 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
CERS1-202ENST00000542296 NOS1P29475 1434 aa29.41■■■□□ 2.3
CERS1-202ENST00000542296 KIF1BO60333 1816 aa29.4■■■□□ 2.3
CERS1-202ENST00000542296 RGL3Q3MIN7 710 aa29.39■■■□□ 2.3
CERS1-202ENST00000542296 PRAG1Q86YV5 1406 aa29.39■■■□□ 2.3
CERS1-202ENST00000542296 CFAP65Q6ZU64 1925 aaKnown RBP29.38■■■□□ 2.29
CERS1-202ENST00000542296 UGGT1Q9NYU2 1555 aa29.38■■■□□ 2.29
CERS1-202ENST00000542296 STAC3Q96MF2 364 aa29.37■■■□□ 2.29
CERS1-202ENST00000542296 EIF4G2P78344 907 aaKnown RBP eCLIP29.36■■■□□ 2.29
CERS1-202ENST00000542296 PIK3C2BO00750 1634 aa29.35■■■□□ 2.29
CERS1-202ENST00000542296 KDM2AQ9Y2K7 1162 aa29.34■■■□□ 2.29
CERS1-202ENST00000542296 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
CERS1-202ENST00000542296 SYNMO15061 1565 aa29.32■■■□□ 2.28
CERS1-202ENST00000542296 HSPA5P11021 654 aaKnown RBP29.32■■■□□ 2.28
CERS1-202ENST00000542296 ZNF326Q5BKZ1 582 aaKnown RBP29.31■■■□□ 2.28
CERS1-202ENST00000542296 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
CERS1-202ENST00000542296 ADGRB3O60242 1522 aa29.3■■■□□ 2.28
CERS1-202ENST00000542296 HIRIP3Q9BW71 556 aaPredicted RBP29.29■■■□□ 2.28
CERS1-202ENST00000542296 CLTCQ00610 1675 aaKnown RBP29.29■■■□□ 2.28
CERS1-202ENST00000542296 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
CERS1-202ENST00000542296 IFT172Q9UG01 1749 aa29.28■■■□□ 2.28
CERS1-202ENST00000542296 MIER1Q8N108 512 aa29.28■■■□□ 2.28
CERS1-202ENST00000542296 MADDQ8WXG6 1647 aa29.26■■■□□ 2.28
CERS1-202ENST00000542296 LAMC1P11047 1609 aa29.25■■■□□ 2.27
CERS1-202ENST00000542296 GPRASP1Q5JY77 1395 aa29.25■■■□□ 2.27
CERS1-202ENST00000542296 MYOM2P54296 1465 aa29.23■■■□□ 2.27
CERS1-202ENST00000542296 USP47Q96K76 1375 aa29.21■■■□□ 2.27
CERS1-202ENST00000542296 SLC52A1Q9NWF4 448 aa29.21■■■□□ 2.27
CERS1-202ENST00000542296 ERVK-7P63135 1459 aa29.2■■■□□ 2.27
CERS1-202ENST00000542296 ROCK2O75116 1388 aaKnown RBP29.19■■■□□ 2.26
CERS1-202ENST00000542296 CARD11Q9BXL7 1154 aa29.18■■■□□ 2.26
CERS1-202ENST00000542296 POLR1AO95602 1720 aaPredicted RBP29.18■■■□□ 2.26
CERS1-202ENST00000542296 SPATA31D1Q6ZQQ2 1576 aa29.18■■■□□ 2.26
CERS1-202ENST00000542296 KIAA1210Q9ULL0 1709 aa29.18■■■□□ 2.26
CERS1-202ENST00000542296 PPLO60437 1756 aa29.17■■■□□ 2.26
CERS1-202ENST00000542296 NRXN1Q9ULB1 1477 aa29.16■■■□□ 2.26
CERS1-202ENST00000542296 MLECQ14165 292 aa29.15■■■□□ 2.26
CERS1-202ENST00000542296 RPGRIP1LQ68CZ1 1315 aa29.15■■■□□ 2.26
CERS1-202ENST00000542296 IDI1Q13907 227 aa29.14■■■□□ 2.25
CERS1-202ENST00000542296 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
CERS1-202ENST00000542296 TMEM131LA2VDJ0 1609 aa29.11■■■□□ 2.25
CERS1-202ENST00000542296 FBXO31Q5XUX0 539 aaPredicted RBP29.11■■■□□ 2.25
CERS1-202ENST00000542296 ARID4BQ4LE39 1312 aaPredicted RBP29.11■■■□□ 2.25
CERS1-202ENST00000542296 WASHC2AQ641Q2 1341 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms