RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 NLRP2Q9NX02 1062 aa11.24□□□□□ -0.61
FNDC3A-206ENST00000541916 PLB1Q6P1J6 1458 aa11.23□□□□□ -0.61
FNDC3A-206ENST00000541916 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
FNDC3A-206ENST00000541916 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
FNDC3A-206ENST00000541916 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
FNDC3A-206ENST00000541916 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
FNDC3A-206ENST00000541916 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
FNDC3A-206ENST00000541916 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
FNDC3A-206ENST00000541916 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
FNDC3A-206ENST00000541916 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
FNDC3A-206ENST00000541916 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
FNDC3A-206ENST00000541916 NGLY1Q96IV0 654 aa11.21□□□□□ -0.62
FNDC3A-206ENST00000541916 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.62
FNDC3A-206ENST00000541916 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
FNDC3A-206ENST00000541916 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
FNDC3A-206ENST00000541916 ADAMTS2O95450 1211 aa11.2□□□□□ -0.62
FNDC3A-206ENST00000541916 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
FNDC3A-206ENST00000541916 FKBP8Q14318 412 aa11.19□□□□□ -0.62
FNDC3A-206ENST00000541916 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
FNDC3A-206ENST00000541916 DENND4BO75064 1496 aaPredicted RBP11.19□□□□□ -0.62
FNDC3A-206ENST00000541916 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
FNDC3A-206ENST00000541916 SLC52A1Q9NWF4 448 aa11.18□□□□□ -0.62
FNDC3A-206ENST00000541916 ABTB2Q8N961 1025 aa11.18□□□□□ -0.62
FNDC3A-206ENST00000541916 NLRP6P59044 892 aa11.18□□□□□ -0.62
FNDC3A-206ENST00000541916 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
FNDC3A-206ENST00000541916 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
FNDC3A-206ENST00000541916 FRAT2O75474 233 aaPredicted RBP11.17□□□□□ -0.62
FNDC3A-206ENST00000541916 HSPA2P54652 639 aa11.17□□□□□ -0.62
FNDC3A-206ENST00000541916 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
FNDC3A-206ENST00000541916 TEFQ10587 303 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 PMFBP1Q8TBY8 1022 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
FNDC3A-206ENST00000541916 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
FNDC3A-206ENST00000541916 TROQ12816 1431 aaPredicted RBP11.14□□□□□ -0.63
FNDC3A-206ENST00000541916 FRAT1Q92837 279 aaPredicted RBP11.14□□□□□ -0.63
FNDC3A-206ENST00000541916 GORABQ5T7V8 394 aa11.14□□□□□ -0.63
FNDC3A-206ENST00000541916 TMEM132EQ6IEE7 984 aa11.14□□□□□ -0.63
FNDC3A-206ENST00000541916 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
FNDC3A-206ENST00000541916 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
FNDC3A-206ENST00000541916 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
FNDC3A-206ENST00000541916 XPCQ01831 940 aaPredicted RBP11.13□□□□□ -0.63
FNDC3A-206ENST00000541916 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
FNDC3A-206ENST00000541916 ASXL2Q76L83 1435 aa11.13□□□□□ -0.63
FNDC3A-206ENST00000541916 ANKRD50Q9ULJ7 1429 aa11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 KTN1Q86UP2 1357 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
FNDC3A-206ENST00000541916 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 HSPA5P11021 654 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
FNDC3A-206ENST00000541916 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 MIER1Q8N108 512 aa11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 MS4A1P11836 297 aa11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
FNDC3A-206ENST00000541916 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
FNDC3A-206ENST00000541916 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
FNDC3A-206ENST00000541916 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
FNDC3A-206ENST00000541916 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
FNDC3A-206ENST00000541916 MSH6P52701 1360 aa11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 FANCAO15360 1455 aa11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 EPRSP07814 1512 aaKnown RBP11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
FNDC3A-206ENST00000541916 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 KCNJ4P48050 445 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 FGD1P98174 961 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 STAC3Q96MF2 364 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 CWC22Q9HCG8 908 aaKnown RBP11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
FNDC3A-206ENST00000541916 IRX6P78412 446 aaPredicted RBP11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 CUL7Q14999 1698 aa11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 NAP1L2Q9ULW6 460 aaPredicted RBP11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
FNDC3A-206ENST00000541916 RRBP1Q9P2E9 1410 aaKnown RBP11.05□□□□□ -0.64
FNDC3A-206ENST00000541916 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
FNDC3A-206ENST00000541916 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
FNDC3A-206ENST00000541916 FGD6Q6ZV73 1430 aa11.05□□□□□ -0.64
FNDC3A-206ENST00000541916 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
FNDC3A-206ENST00000541916 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
FNDC3A-206ENST00000541916 KIF21BO75037 1637 aa11.04□□□□□ -0.64
FNDC3A-206ENST00000541916 TNRQ92752 1358 aa11.04□□□□□ -0.64
FNDC3A-206ENST00000541916 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms