RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
CHFR-220ENST00000541817 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHFR-220ENST00000541817 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
CHFR-220ENST00000541817 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
CHFR-220ENST00000541817 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
CHFR-220ENST00000541817 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
CHFR-220ENST00000541817 MED14O60244 1454 aa16.28■□□□□ 0.2
CHFR-220ENST00000541817 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
CHFR-220ENST00000541817 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
CHFR-220ENST00000541817 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
CHFR-220ENST00000541817 XIRP1Q702N8 1843 aaKnown RBP16.26■□□□□ 0.19
CHFR-220ENST00000541817 SYNMO15061 1565 aa16.26■□□□□ 0.19
CHFR-220ENST00000541817 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
CHFR-220ENST00000541817 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
CHFR-220ENST00000541817 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
CHFR-220ENST00000541817 PZPP20742 1482 aa16.22■□□□□ 0.19
CHFR-220ENST00000541817 MIA2Q96PC5 1412 aa16.22■□□□□ 0.19
CHFR-220ENST00000541817 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
CHFR-220ENST00000541817 KIF3BO15066 747 aa16.22■□□□□ 0.19
CHFR-220ENST00000541817 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
CHFR-220ENST00000541817 EEA1Q15075 1411 aa16.2■□□□□ 0.18
CHFR-220ENST00000541817 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
CHFR-220ENST00000541817 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
CHFR-220ENST00000541817 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
CHFR-220ENST00000541817 ZC3H13Q5T200 1668 aaKnown RBP16.19■□□□□ 0.18
CHFR-220ENST00000541817 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
CHFR-220ENST00000541817 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
CHFR-220ENST00000541817 ROBO1Q9Y6N7 1651 aa16.18■□□□□ 0.18
CHFR-220ENST00000541817 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
CHFR-220ENST00000541817 KIAA1107Q9UPP5 1409 aa16.17■□□□□ 0.18
CHFR-220ENST00000541817 KDM5DQ9BY66 1539 aa16.16■□□□□ 0.18
CHFR-220ENST00000541817 DHX29Q7Z478 1369 aaKnown RBP16.15■□□□□ 0.18
CHFR-220ENST00000541817 CCDC18Q5T9S5 1454 aa16.14■□□□□ 0.17
CHFR-220ENST00000541817 LTKP29376 864 aa16.13■□□□□ 0.17
CHFR-220ENST00000541817 PLEKHH2Q8IVE3 1493 aa16.12■□□□□ 0.17
CHFR-220ENST00000541817 CFAP65Q6ZU64 1925 aaKnown RBP16.11■□□□□ 0.17
CHFR-220ENST00000541817 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
CHFR-220ENST00000541817 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
CHFR-220ENST00000541817 TMEM94Q12767 1356 aa16.11■□□□□ 0.17
CHFR-220ENST00000541817 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
CHFR-220ENST00000541817 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
CHFR-220ENST00000541817 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
CHFR-220ENST00000541817 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
CHFR-220ENST00000541817 LRP6O75581 1613 aa16.08■□□□□ 0.17
CHFR-220ENST00000541817 SRCAPQ6ZRS2 3230 aa16.08■□□□□ 0.16
CHFR-220ENST00000541817 JCADQ9P266 1359 aa16.07■□□□□ 0.16
CHFR-220ENST00000541817 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
CHFR-220ENST00000541817 UBR1Q8IWV7 1749 aa16.07■□□□□ 0.16
CHFR-220ENST00000541817 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
CHFR-220ENST00000541817 RXRBP28702 533 aa16.05■□□□□ 0.16
CHFR-220ENST00000541817 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
CHFR-220ENST00000541817 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
CHFR-220ENST00000541817 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
CHFR-220ENST00000541817 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
CHFR-220ENST00000541817 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
CHFR-220ENST00000541817 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
CHFR-220ENST00000541817 SLAIN2Q9P270 581 aa16.01■□□□□ 0.15
CHFR-220ENST00000541817 ARHGAP23Q9P227 1491 aa15.99■□□□□ 0.15
CHFR-220ENST00000541817 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
CHFR-220ENST00000541817 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
CHFR-220ENST00000541817 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
CHFR-220ENST00000541817 KCNA6P17658 529 aa15.99■□□□□ 0.15
CHFR-220ENST00000541817 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
CHFR-220ENST00000541817 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
CHFR-220ENST00000541817 ABCC3O15438 1527 aa15.99■□□□□ 0.15
CHFR-220ENST00000541817 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
CHFR-220ENST00000541817 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
CHFR-220ENST00000541817 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
CHFR-220ENST00000541817 SLIT1O75093 1534 aa15.97■□□□□ 0.15
CHFR-220ENST00000541817 CEP152O94986 1710 aa15.97■□□□□ 0.15
CHFR-220ENST00000541817 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
CHFR-220ENST00000541817 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
CHFR-220ENST00000541817 NUTM2DQ5VT03 806 aaPredicted RBP15.95■□□□□ 0.14
CHFR-220ENST00000541817 MSH6P52701 1360 aa15.95■□□□□ 0.14
CHFR-220ENST00000541817 AFF2P51816 1311 aa15.94■□□□□ 0.14
CHFR-220ENST00000541817 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
CHFR-220ENST00000541817 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
CHFR-220ENST00000541817 PRDM15P57071 1507 aaPredicted RBP15.93■□□□□ 0.14
CHFR-220ENST00000541817 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
CHFR-220ENST00000541817 RGS12O14924 1447 aa15.92■□□□□ 0.14
CHFR-220ENST00000541817 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
CHFR-220ENST00000541817 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
CHFR-220ENST00000541817 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
CHFR-220ENST00000541817 BCANQ96GW7 911 aa15.9■□□□□ 0.14
CHFR-220ENST00000541817 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
CHFR-220ENST00000541817 CAMSAP2Q08AD1 1489 aa15.89■□□□□ 0.13
CHFR-220ENST00000541817 FGD6Q6ZV73 1430 aa15.88■□□□□ 0.13
CHFR-220ENST00000541817 MROH1Q8NDA8 1641 aa15.88■□□□□ 0.13
CHFR-220ENST00000541817 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
CHFR-220ENST00000541817 TET3O43151 1660 aa15.88■□□□□ 0.13
CHFR-220ENST00000541817 SHPRHQ149N8 1683 aa15.88■□□□□ 0.13
CHFR-220ENST00000541817 TSPY4P0CV99 314 aa15.86■□□□□ 0.13
CHFR-220ENST00000541817 TSPY10P0CW01 314 aa15.86■□□□□ 0.13
CHFR-220ENST00000541817 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
CHFR-220ENST00000541817 NWD1Q149M9 1564 aa15.85■□□□□ 0.13
CHFR-220ENST00000541817 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
CHFR-220ENST00000541817 C8orf37Q96NL8 207 aa15.85■□□□□ 0.13
CHFR-220ENST00000541817 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
CHFR-220ENST00000541817 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.12
CHFR-220ENST00000541817 IDI1Q13907 227 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms