RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
GCFC2-211ENST00000541687 GLIPR1L2Q4G1C9 344 aa18.7■□□□□ 0.58
GCFC2-211ENST00000541687 SPRYD3Q8NCJ5 442 aa18.7■□□□□ 0.58
GCFC2-211ENST00000541687 DAPK1P53355 1430 aa18.7■□□□□ 0.58
GCFC2-211ENST00000541687 PDE4AP27815 886 aa18.69■□□□□ 0.58
GCFC2-211ENST00000541687 MLECQ14165 292 aa18.68■□□□□ 0.58
GCFC2-211ENST00000541687 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
GCFC2-211ENST00000541687 APAF1O14727 1248 aa18.66■□□□□ 0.58
GCFC2-211ENST00000541687 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
GCFC2-211ENST00000541687 PNISRQ8TF01 805 aaKnown RBP18.66■□□□□ 0.58
GCFC2-211ENST00000541687 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
GCFC2-211ENST00000541687 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
GCFC2-211ENST00000541687 KIAA1107Q9UPP5 1409 aa18.64■□□□□ 0.57
GCFC2-211ENST00000541687 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
GCFC2-211ENST00000541687 SOX12O15370 315 aa18.63■□□□□ 0.57
GCFC2-211ENST00000541687 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
GCFC2-211ENST00000541687 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
GCFC2-211ENST00000541687 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
GCFC2-211ENST00000541687 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
GCFC2-211ENST00000541687 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
GCFC2-211ENST00000541687 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
GCFC2-211ENST00000541687 ABCC5O15440 1437 aa18.6■□□□□ 0.57
GCFC2-211ENST00000541687 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
GCFC2-211ENST00000541687 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
GCFC2-211ENST00000541687 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
GCFC2-211ENST00000541687 C14orf37Q86TY3 774 aa18.58■□□□□ 0.57
GCFC2-211ENST00000541687 ARID4BQ4LE39 1312 aaPredicted RBP18.58■□□□□ 0.57
GCFC2-211ENST00000541687 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
GCFC2-211ENST00000541687 MSH5O43196 834 aa18.57■□□□□ 0.56
GCFC2-211ENST00000541687 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
GCFC2-211ENST00000541687 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
GCFC2-211ENST00000541687 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
GCFC2-211ENST00000541687 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
GCFC2-211ENST00000541687 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
GCFC2-211ENST00000541687 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
GCFC2-211ENST00000541687 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
GCFC2-211ENST00000541687 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
GCFC2-211ENST00000541687 CUL7Q14999 1698 aa18.54■□□□□ 0.56
GCFC2-211ENST00000541687 ITPRIPQ8IWB1 547 aa18.53■□□□□ 0.56
GCFC2-211ENST00000541687 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
GCFC2-211ENST00000541687 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
GCFC2-211ENST00000541687 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
GCFC2-211ENST00000541687 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
GCFC2-211ENST00000541687 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
GCFC2-211ENST00000541687 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
GCFC2-211ENST00000541687 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
GCFC2-211ENST00000541687 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
GCFC2-211ENST00000541687 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
GCFC2-211ENST00000541687 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
GCFC2-211ENST00000541687 APBB1O00213 710 aa18.48■□□□□ 0.55
GCFC2-211ENST00000541687 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
GCFC2-211ENST00000541687 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
GCFC2-211ENST00000541687 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
GCFC2-211ENST00000541687 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
GCFC2-211ENST00000541687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■□□□ 13.3
GCFC2-211ENST00000541687 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
GCFC2-211ENST00000541687 RPRD2Q5VT52 1461 aaKnown RBP18.46■□□□□ 0.55
GCFC2-211ENST00000541687 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
GCFC2-211ENST00000541687 MS4A1P11836 297 aa18.46■□□□□ 0.55
GCFC2-211ENST00000541687 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
GCFC2-211ENST00000541687 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
GCFC2-211ENST00000541687 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
GCFC2-211ENST00000541687 E9PSI1 815 aa18.45■□□□□ 0.54
GCFC2-211ENST00000541687 SMG6Q86US8 1419 aaKnown RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
GCFC2-211ENST00000541687 MFAP1P55081 439 aaKnown RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
GCFC2-211ENST00000541687 GZF1Q9H116 711 aaPredicted RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 TRIM44Q96DX7 344 aaPredicted RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 ELL2O00472 640 aaPredicted RBP18.45■□□□□ 0.54
GCFC2-211ENST00000541687 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
GCFC2-211ENST00000541687 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
GCFC2-211ENST00000541687 HSP90AB1P08238 724 aaKnown RBP18.43■□□□□ 0.54
GCFC2-211ENST00000541687 MINK1Q8N4C8 1332 aaPredicted RBP18.42■□□□□ 0.54
GCFC2-211ENST00000541687 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
GCFC2-211ENST00000541687 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
GCFC2-211ENST00000541687 BCAR3O75815 825 aa18.39■□□□□ 0.53
GCFC2-211ENST00000541687 HSCBQ8IWL3 235 aa18.39■□□□□ 0.53
GCFC2-211ENST00000541687 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
GCFC2-211ENST00000541687 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
GCFC2-211ENST00000541687 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
GCFC2-211ENST00000541687 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
GCFC2-211ENST00000541687 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
GCFC2-211ENST00000541687 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
GCFC2-211ENST00000541687 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
GCFC2-211ENST00000541687 GOLGA6L22H0YM25 854 aa18.35■□□□□ 0.53
GCFC2-211ENST00000541687 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
GCFC2-211ENST00000541687 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
GCFC2-211ENST00000541687 MTHFSP49914 203 aa18.35■□□□□ 0.53
GCFC2-211ENST00000541687 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
GCFC2-211ENST00000541687 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
GCFC2-211ENST00000541687 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
GCFC2-211ENST00000541687 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
GCFC2-211ENST00000541687 EVC2Q86UK5 1308 aa18.33■□□□□ 0.52
GCFC2-211ENST00000541687 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.52
GCFC2-211ENST00000541687 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.52
GCFC2-211ENST00000541687 CFAP43Q8NDM7 1665 aa18.32■□□□□ 0.52
GCFC2-211ENST00000541687 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
GCFC2-211ENST00000541687 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms