RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
PRICKLE3-205ENST00000540849 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
PRICKLE3-205ENST00000540849 TRPM1Q7Z4N2 1603 aa18.01■□□□□ 0.47
PRICKLE3-205ENST00000540849 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
PRICKLE3-205ENST00000540849 LRPPRCP42704 1394 aaKnown RBP17.98■□□□□ 0.47
PRICKLE3-205ENST00000540849 UNC13BO14795 1591 aa17.98■□□□□ 0.47
PRICKLE3-205ENST00000540849 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
PRICKLE3-205ENST00000540849 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
PRICKLE3-205ENST00000540849 SYCP2Q9BX26 1530 aa17.97■□□□□ 0.47
PRICKLE3-205ENST00000540849 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.47
PRICKLE3-205ENST00000540849 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
PRICKLE3-205ENST00000540849 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
PRICKLE3-205ENST00000540849 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
PRICKLE3-205ENST00000540849 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
PRICKLE3-205ENST00000540849 KTN1Q86UP2 1357 aaKnown RBP17.95■□□□□ 0.46
PRICKLE3-205ENST00000540849 RALBP1Q15311 655 aa17.93■□□□□ 0.46
PRICKLE3-205ENST00000540849 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
PRICKLE3-205ENST00000540849 CCDC144AA2RUR9 1427 aa17.93■□□□□ 0.46
PRICKLE3-205ENST00000540849 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
PRICKLE3-205ENST00000540849 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 LAMC1P11047 1609 aa17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 MYO5CQ9NQX4 1742 aa17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 A2MP01023 1474 aa17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRICKLE3-205ENST00000540849 IQGAP3Q86VI3 1631 aa17.9■□□□□ 0.46
PRICKLE3-205ENST00000540849 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
PRICKLE3-205ENST00000540849 CHD1O14646 1710 aa17.89■□□□□ 0.46
PRICKLE3-205ENST00000540849 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.45
PRICKLE3-205ENST00000540849 GPRASP1Q5JY77 1395 aa17.89■□□□□ 0.45
PRICKLE3-205ENST00000540849 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
PRICKLE3-205ENST00000540849 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
PRICKLE3-205ENST00000540849 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
PRICKLE3-205ENST00000540849 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
PRICKLE3-205ENST00000540849 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
PRICKLE3-205ENST00000540849 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
PRICKLE3-205ENST00000540849 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
PRICKLE3-205ENST00000540849 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
PRICKLE3-205ENST00000540849 NLRP13Q86W25 1043 aa17.83■□□□□ 0.45
PRICKLE3-205ENST00000540849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.45
PRICKLE3-205ENST00000540849 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.45
PRICKLE3-205ENST00000540849 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.44
PRICKLE3-205ENST00000540849 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
PRICKLE3-205ENST00000540849 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
PRICKLE3-205ENST00000540849 PER1O15534 1290 aaPredicted RBP17.82■□□□□ 0.44
PRICKLE3-205ENST00000540849 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
PRICKLE3-205ENST00000540849 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
PRICKLE3-205ENST00000540849 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
PRICKLE3-205ENST00000540849 TESK2Q96S53 571 aa17.8■□□□□ 0.44
PRICKLE3-205ENST00000540849 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
PRICKLE3-205ENST00000540849 ATP10AO60312 1499 aa17.79■□□□□ 0.44
PRICKLE3-205ENST00000540849 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
PRICKLE3-205ENST00000540849 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
PRICKLE3-205ENST00000540849 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
PRICKLE3-205ENST00000540849 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
PRICKLE3-205ENST00000540849 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
PRICKLE3-205ENST00000540849 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
PRICKLE3-205ENST00000540849 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
PRICKLE3-205ENST00000540849 CC2D1BQ5T0F9 858 aaKnown RBP17.74■□□□□ 0.43
PRICKLE3-205ENST00000540849 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
PRICKLE3-205ENST00000540849 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
PRICKLE3-205ENST00000540849 ABCC1P33527 1531 aa17.74■□□□□ 0.43
PRICKLE3-205ENST00000540849 PANK3Q9H999 370 aa17.73■□□□□ 0.43
PRICKLE3-205ENST00000540849 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
PRICKLE3-205ENST00000540849 INSRP06213 1382 aa17.73■□□□□ 0.43
PRICKLE3-205ENST00000540849 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
PRICKLE3-205ENST00000540849 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
PRICKLE3-205ENST00000540849 PLCH2O75038 1416 aa17.71■□□□□ 0.43
PRICKLE3-205ENST00000540849 IQGAP1P46940 1657 aa17.71■□□□□ 0.43
PRICKLE3-205ENST00000540849 TMF1P82094 1093 aa17.71■□□□□ 0.43
PRICKLE3-205ENST00000540849 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
PRICKLE3-205ENST00000540849 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
PRICKLE3-205ENST00000540849 SPHKAPQ2M3C7 1700 aa17.68■□□□□ 0.42
PRICKLE3-205ENST00000540849 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
PRICKLE3-205ENST00000540849 ANP32AP39687 249 aaKnown RBP17.67■□□□□ 0.42
PRICKLE3-205ENST00000540849 CEP152O94986 1710 aa17.67■□□□□ 0.42
PRICKLE3-205ENST00000540849 TRPM2O94759 1503 aa17.66■□□□□ 0.42
PRICKLE3-205ENST00000540849 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
PRICKLE3-205ENST00000540849 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.42
PRICKLE3-205ENST00000540849 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.42
PRICKLE3-205ENST00000540849 ZFYVE16Q7Z3T8 1539 aa17.64■□□□□ 0.41
PRICKLE3-205ENST00000540849 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
PRICKLE3-205ENST00000540849 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
PRICKLE3-205ENST00000540849 SYNMO15061 1565 aa17.63■□□□□ 0.41
PRICKLE3-205ENST00000540849 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
PRICKLE3-205ENST00000540849 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
PRICKLE3-205ENST00000540849 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
PRICKLE3-205ENST00000540849 PLIN1O60240 522 aa17.61■□□□□ 0.41
PRICKLE3-205ENST00000540849 MYOM1P52179 1685 aa17.61■□□□□ 0.41
PRICKLE3-205ENST00000540849 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
PRICKLE3-205ENST00000540849 PTPRTO14522 1441 aa17.6■□□□□ 0.41
PRICKLE3-205ENST00000540849 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
PRICKLE3-205ENST00000540849 NBR1Q14596 966 aa17.59■□□□□ 0.41
PRICKLE3-205ENST00000540849 TET3O43151 1660 aa17.59■□□□□ 0.41
PRICKLE3-205ENST00000540849 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
PRICKLE3-205ENST00000540849 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
PRICKLE3-205ENST00000540849 CRBNQ96SW2 442 aa17.58■□□□□ 0.4
PRICKLE3-205ENST00000540849 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
PRICKLE3-205ENST00000540849 SPAG9O60271 1321 aaKnown RBP17.58■□□□□ 0.4
PRICKLE3-205ENST00000540849 PPP2R1AP30153 589 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms