RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ITGAEP38570 1179 aa33.59■■■□□ 2.97
TRIM65-202ENST00000540128 EIF2AK4Q9P2K8 1649 aaKnown RBP33.59■■■□□ 2.97
TRIM65-202ENST00000540128 RNF17Q9BXT8 1623 aaKnown RBP33.53■■■□□ 2.96
TRIM65-202ENST00000540128 FAM135AQ9P2D6 1515 aa33.52■■■□□ 2.96
TRIM65-202ENST00000540128 ANKRD50Q9ULJ7 1429 aa33.52■■■□□ 2.96
TRIM65-202ENST00000540128 ZMYM3Q14202 1370 aa33.51■■■□□ 2.96
TRIM65-202ENST00000540128 CEBPAP49715 358 aaPredicted RBP33.5■■■□□ 2.95
TRIM65-202ENST00000540128 WASHC2CQ9Y4E1 1318 aa33.47■■■□□ 2.95
TRIM65-202ENST00000540128 MROH2AA6NES4 1674 aa33.46■■■□□ 2.95
TRIM65-202ENST00000540128 MROH1Q8NDA8 1641 aa33.45■■■□□ 2.95
TRIM65-202ENST00000540128 KDM5DQ9BY66 1539 aa33.43■■■□□ 2.94
TRIM65-202ENST00000540128 CLTCQ00610 1675 aaKnown RBP33.43■■■□□ 2.94
TRIM65-202ENST00000540128 PLPPR3Q6T4P5 718 aa33.42■■■□□ 2.94
TRIM65-202ENST00000540128 C3P01024 1663 aa33.4■■■□□ 2.94
TRIM65-202ENST00000540128 DEPDC5O75140 1603 aa33.4■■■□□ 2.94
TRIM65-202ENST00000540128 PRDM15P57071 1507 aaPredicted RBP33.39■■■□□ 2.94
TRIM65-202ENST00000540128 ABCC3O15438 1527 aa33.38■■■□□ 2.93
TRIM65-202ENST00000540128 SETD1BQ9UPS6 1966 aaKnown RBP33.36■■■□□ 2.93
TRIM65-202ENST00000540128 NPATQ14207 1427 aa33.36■■■□□ 2.93
TRIM65-202ENST00000540128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.35■■■□□ 2.931e-6■□□□□ 9.8
TRIM65-202ENST00000540128 KANK1Q14678 1352 aa33.34■■■□□ 2.93
TRIM65-202ENST00000540128 NAIPQ13075 1403 aa33.34■■■□□ 2.93
TRIM65-202ENST00000540128 VWDEQ8N2E2 1590 aa33.33■■■□□ 2.93
TRIM65-202ENST00000540128 HFM1A2PYH4 1435 aa33.32■■■□□ 2.92
TRIM65-202ENST00000540128 ZC3H13Q5T200 1668 aaKnown RBP33.32■■■□□ 2.92
TRIM65-202ENST00000540128 PZPP20742 1482 aa33.3■■■□□ 2.92
TRIM65-202ENST00000540128 LMTK2Q8IWU2 1503 aa33.28■■■□□ 2.92
TRIM65-202ENST00000540128 ARHGAP31Q2M1Z3 1444 aa33.27■■■□□ 2.92
TRIM65-202ENST00000540128 FBXO31Q5XUX0 539 aaPredicted RBP33.25■■■□□ 2.91
TRIM65-202ENST00000540128 UNC13BO14795 1591 aa33.24■■■□□ 2.91
TRIM65-202ENST00000540128 LMTK3Q96Q04 1460 aa33.24■■■□□ 2.91
TRIM65-202ENST00000540128 CEP152O94986 1710 aa33.22■■■□□ 2.91
TRIM65-202ENST00000540128 GCC2Q8IWJ2 1684 aa33.21■■■□□ 2.91
TRIM65-202ENST00000540128 CAMSAP1Q5T5Y3 1602 aa33.2■■■□□ 2.9
TRIM65-202ENST00000540128 UHRF1BP1Q6BDS2 1440 aa33.19■■■□□ 2.9
TRIM65-202ENST00000540128 PREX1Q8TCU6 1659 aa33.18■■■□□ 2.9
TRIM65-202ENST00000540128 NUP155O75694 1391 aa33.18■■■□□ 2.9
TRIM65-202ENST00000540128 TNRQ92752 1358 aa33.16■■■□□ 2.9
TRIM65-202ENST00000540128 SPATA31D1Q6ZQQ2 1576 aa33.13■■■□□ 2.89
TRIM65-202ENST00000540128 ERVK-7P63135 1459 aa33.12■■■□□ 2.89
TRIM65-202ENST00000540128 EFCAB6Q5THR3 1501 aa33.11■■■□□ 2.89
TRIM65-202ENST00000540128 IQGAP3Q86VI3 1631 aa33.1■■■□□ 2.89
TRIM65-202ENST00000540128 TET3O43151 1660 aa33.08■■■□□ 2.89
TRIM65-202ENST00000540128 RPRD2Q5VT52 1461 aaKnown RBP33.07■■■□□ 2.88
TRIM65-202ENST00000540128 HSPA2P54652 639 aa33.07■■■□□ 2.88
TRIM65-202ENST00000540128 SETD5Q9C0A6 1442 aa33.06■■■□□ 2.88
TRIM65-202ENST00000540128 ACIN1Q9UKV3 1341 aaKnown RBP33.04■■■□□ 2.88
TRIM65-202ENST00000540128 MYO3AQ8NEV4 1616 aa33.04■■■□□ 2.88
TRIM65-202ENST00000540128 NLRP1Q9C000 1473 aa33.04■■■□□ 2.88
TRIM65-202ENST00000540128 CFAP65Q6ZU64 1925 aaKnown RBP33.04■■■□□ 2.88
TRIM65-202ENST00000540128 NOS1P29475 1434 aa33.03■■■□□ 2.88
TRIM65-202ENST00000540128 A2ML1A8K2U0 1454 aa33.03■■■□□ 2.88
TRIM65-202ENST00000540128 TRIM52Q96A61 297 aa33■■■□□ 2.87
TRIM65-202ENST00000540128 CEP170BQ9Y4F5 1589 aaPredicted RBP33■■■□□ 2.87
TRIM65-202ENST00000540128 ZNF142P52746 1687 aaPredicted RBP32.99■■■□□ 2.87
TRIM65-202ENST00000540128 HRCP23327 699 aa32.95■■■□□ 2.87
TRIM65-202ENST00000540128 E9PCH4 1651 aa32.94■■■□□ 2.86
TRIM65-202ENST00000540128 SLC52A1Q9NWF4 448 aa32.93■■■□□ 2.86
TRIM65-202ENST00000540128 RAB3GAP2Q9H2M9 1393 aa32.93■■■□□ 2.86
TRIM65-202ENST00000540128 IDI1Q13907 227 aa32.91■■■□□ 2.86
TRIM65-202ENST00000540128 THEMISQ8N1K5 641 aaPredicted RBP32.9■■■□□ 2.86
TRIM65-202ENST00000540128 SYNMO15061 1565 aa32.9■■■□□ 2.86
TRIM65-202ENST00000540128 SLC4A1APQ9BWU0 796 aaKnown RBP32.89■■■□□ 2.86
TRIM65-202ENST00000540128 PLA2R1Q13018 1463 aa32.87■■■□□ 2.85
TRIM65-202ENST00000540128 UGGT1Q9NYU2 1555 aa32.87■■■□□ 2.85
TRIM65-202ENST00000540128 PTPRTO14522 1441 aa32.86■■■□□ 2.85
TRIM65-202ENST00000540128 PKD2Q13563 968 aa32.86■■■□□ 2.85
TRIM65-202ENST00000540128 MPHOSPH9Q99550 1183 aa32.84■■■□□ 2.85
TRIM65-202ENST00000540128 TRIM26Q12899 539 aaPredicted RBP32.83■■■□□ 2.85
TRIM65-202ENST00000540128 STRCQ7RTU9 1775 aa32.81■■■□□ 2.84
TRIM65-202ENST00000540128 DMRT2Q9Y5R5 561 aa32.79■■■□□ 2.84
TRIM65-202ENST00000540128 PIK3C2BO00750 1634 aa32.77■■■□□ 2.84
TRIM65-202ENST00000540128 UBR1Q8IWV7 1749 aa32.77■■■□□ 2.84
TRIM65-202ENST00000540128 KDM5AP29375 1690 aaKnown RBP32.76■■■□□ 2.84
TRIM65-202ENST00000540128 NCKAP5LQ9HCH0 1330 aa32.76■■■□□ 2.83
TRIM65-202ENST00000540128 ANKLE2Q86XL3 938 aa32.75■■■□□ 2.83
TRIM65-202ENST00000540128 STAG3Q9UJ98 1225 aa32.75■■■□□ 2.83
TRIM65-202ENST00000540128 ARHGAP23Q9P227 1491 aa32.72■■■□□ 2.83
TRIM65-202ENST00000540128 SPHKAPQ2M3C7 1700 aa32.71■■■□□ 2.83
TRIM65-202ENST00000540128 ADGRB3O60242 1522 aa32.7■■■□□ 2.83
TRIM65-202ENST00000540128 SLIT1O75093 1534 aa32.7■■■□□ 2.83
TRIM65-202ENST00000540128 TRPM2O94759 1503 aa32.7■■■□□ 2.83
TRIM65-202ENST00000540128 TMEM2Q9UHN6 1383 aa32.7■■■□□ 2.82
TRIM65-202ENST00000540128 FOXD1Q16676 465 aa32.68■■■□□ 2.82
TRIM65-202ENST00000540128 TMEM131LA2VDJ0 1609 aa32.66■■■□□ 2.82
TRIM65-202ENST00000540128 MED14O60244 1454 aa32.64■■■□□ 2.82
TRIM65-202ENST00000540128 LTKP29376 864 aa32.64■■■□□ 2.82
TRIM65-202ENST00000540128 TXNDC2Q86VQ3 553 aa32.63■■■□□ 2.81
TRIM65-202ENST00000540128 EID1Q9Y6B2 187 aa32.61■■■□□ 2.81
TRIM65-202ENST00000540128 CHGAP10645 457 aaKnown RBP32.6■■■□□ 2.81
TRIM65-202ENST00000540128 NEURL4Q96JN8 1562 aa32.6■■■□□ 2.81
TRIM65-202ENST00000540128 SCAF11Q99590 1463 aaKnown RBP32.59■■■□□ 2.81
TRIM65-202ENST00000540128 CLTCL1P53675 1640 aa32.58■■■□□ 2.81
TRIM65-202ENST00000540128 POLR1AO95602 1720 aaPredicted RBP32.57■■■□□ 2.81
TRIM65-202ENST00000540128 HDGFP51858 240 aaKnown RBP32.57■■■□□ 2.8
TRIM65-202ENST00000540128 NPHP4O75161 1426 aaPredicted RBP32.57■■■□□ 2.8
TRIM65-202ENST00000540128 ZFYVE9O95405 1425 aa32.56■■■□□ 2.8
TRIM65-202ENST00000540128 MYO5BQ9ULV0 1848 aa32.54■■■□□ 2.8
TRIM65-202ENST00000540128 RIMS2Q9UQ26 1411 aa32.53■■■□□ 2.8
TRIM65-202ENST00000540128 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms