RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KDM5CP41229 1560 aa17.76■□□□□ 0.43
DDX55-206ENST00000539934 AAMPQ13685 434 aa17.75■□□□□ 0.43
DDX55-206ENST00000539934 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
DDX55-206ENST00000539934 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
DDX55-206ENST00000539934 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
DDX55-206ENST00000539934 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
DDX55-206ENST00000539934 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
DDX55-206ENST00000539934 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
DDX55-206ENST00000539934 ITGAEP38570 1179 aa17.71■□□□□ 0.43
DDX55-206ENST00000539934 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
DDX55-206ENST00000539934 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
DDX55-206ENST00000539934 CAMSAP1Q5T5Y3 1602 aa17.71■□□□□ 0.43
DDX55-206ENST00000539934 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
DDX55-206ENST00000539934 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
DDX55-206ENST00000539934 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
DDX55-206ENST00000539934 PIP4K2BP78356 416 aa17.67■□□□□ 0.42
DDX55-206ENST00000539934 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
DDX55-206ENST00000539934 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
DDX55-206ENST00000539934 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX55-206ENST00000539934 KIDINS220Q9ULH0 1771 aa17.66■□□□□ 0.42
DDX55-206ENST00000539934 ABCC1P33527 1531 aa17.65■□□□□ 0.42
DDX55-206ENST00000539934 GGT6Q6P531 493 aa17.65■□□□□ 0.42
DDX55-206ENST00000539934 BRD2P25440 801 aaKnown RBP17.64■□□□□ 0.41
DDX55-206ENST00000539934 REREQ9P2R6 1566 aa17.64■□□□□ 0.41
DDX55-206ENST00000539934 FGD6Q6ZV73 1430 aa17.63■□□□□ 0.41
DDX55-206ENST00000539934 AGLP35573 1532 aa17.63■□□□□ 0.41
DDX55-206ENST00000539934 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
DDX55-206ENST00000539934 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
DDX55-206ENST00000539934 PREX2Q70Z35 1606 aa17.62■□□□□ 0.41
DDX55-206ENST00000539934 DEKP35659 375 aaKnown RBP17.62■□□□□ 0.41
DDX55-206ENST00000539934 HSPA1LP34931 641 aa17.61■□□□□ 0.41
DDX55-206ENST00000539934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDX55-206ENST00000539934 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
DDX55-206ENST00000539934 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
DDX55-206ENST00000539934 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
DDX55-206ENST00000539934 ZMYND15Q9H091 742 aa17.59■□□□□ 0.41
DDX55-206ENST00000539934 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.41
DDX55-206ENST00000539934 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.4
DDX55-206ENST00000539934 IQSEC2Q5JU85 1478 aa17.58■□□□□ 0.4
DDX55-206ENST00000539934 SYCP2Q9BX26 1530 aa17.58■□□□□ 0.4
DDX55-206ENST00000539934 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.4
DDX55-206ENST00000539934 SAMD9LQ8IVG5 1584 aa17.58■□□□□ 0.4
DDX55-206ENST00000539934 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.57■□□□□ 0.4
DDX55-206ENST00000539934 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
DDX55-206ENST00000539934 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
DDX55-206ENST00000539934 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
DDX55-206ENST00000539934 NPATQ14207 1427 aa17.56■□□□□ 0.4
DDX55-206ENST00000539934 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
DDX55-206ENST00000539934 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
DDX55-206ENST00000539934 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
DDX55-206ENST00000539934 PKD2Q13563 968 aa17.53■□□□□ 0.4
DDX55-206ENST00000539934 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
DDX55-206ENST00000539934 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
DDX55-206ENST00000539934 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
DDX55-206ENST00000539934 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
DDX55-206ENST00000539934 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
DDX55-206ENST00000539934 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
DDX55-206ENST00000539934 PTPRKQ15262 1439 aa17.52■□□□□ 0.4
DDX55-206ENST00000539934 ZNF644Q9H582 1327 aaPredicted RBP17.52■□□□□ 0.39
DDX55-206ENST00000539934 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
DDX55-206ENST00000539934 MROH2AA6NES4 1674 aa17.51■□□□□ 0.39
DDX55-206ENST00000539934 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
DDX55-206ENST00000539934 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
DDX55-206ENST00000539934 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
DDX55-206ENST00000539934 A2MP01023 1474 aa17.49■□□□□ 0.39
DDX55-206ENST00000539934 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
DDX55-206ENST00000539934 MED1Q15648 1581 aaPredicted RBP17.49■□□□□ 0.39
DDX55-206ENST00000539934 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
DDX55-206ENST00000539934 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
DDX55-206ENST00000539934 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
DDX55-206ENST00000539934 TOM1O60784 492 aa17.47■□□□□ 0.39
DDX55-206ENST00000539934 ZNF142P52746 1687 aaPredicted RBP17.46■□□□□ 0.39
DDX55-206ENST00000539934 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
DDX55-206ENST00000539934 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
DDX55-206ENST00000539934 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
DDX55-206ENST00000539934 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
DDX55-206ENST00000539934 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
DDX55-206ENST00000539934 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
DDX55-206ENST00000539934 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
DDX55-206ENST00000539934 KIF3BO15066 747 aa17.41■□□□□ 0.38
DDX55-206ENST00000539934 SUPT16HQ9Y5B9 1047 aaKnown RBP17.41■□□□□ 0.38
DDX55-206ENST00000539934 A2ML1A8K2U0 1454 aa17.4■□□□□ 0.38
DDX55-206ENST00000539934 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
DDX55-206ENST00000539934 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
DDX55-206ENST00000539934 NEURL4Q96JN8 1562 aa17.39■□□□□ 0.37
DDX55-206ENST00000539934 TNRQ92752 1358 aa17.38■□□□□ 0.37
DDX55-206ENST00000539934 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
DDX55-206ENST00000539934 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
DDX55-206ENST00000539934 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
DDX55-206ENST00000539934 WASHC2CQ9Y4E1 1318 aa17.36■□□□□ 0.37
DDX55-206ENST00000539934 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
DDX55-206ENST00000539934 NAIPQ13075 1403 aa17.35■□□□□ 0.37
DDX55-206ENST00000539934 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
DDX55-206ENST00000539934 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
DDX55-206ENST00000539934 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
DDX55-206ENST00000539934 GCC2Q8IWJ2 1684 aa17.34■□□□□ 0.37
DDX55-206ENST00000539934 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
DDX55-206ENST00000539934 CPS1P31327 1500 aa17.33■□□□□ 0.36
DDX55-206ENST00000539934 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.36
DDX55-206ENST00000539934 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms