RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
SPARC-209ENST00000539687 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
SPARC-209ENST00000539687 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
SPARC-209ENST00000539687 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPARC-209ENST00000539687 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
SPARC-209ENST00000539687 TRAPPC8Q9Y2L5 1435 aa14.33□□□□□ -0.11
SPARC-209ENST00000539687 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
SPARC-209ENST00000539687 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
SPARC-209ENST00000539687 EIF2AK4Q9P2K8 1649 aaKnown RBP14.32□□□□□ -0.12
SPARC-209ENST00000539687 ATP10AO60312 1499 aa14.31□□□□□ -0.12
SPARC-209ENST00000539687 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
SPARC-209ENST00000539687 UHRF1BP1Q6BDS2 1440 aa14.31□□□□□ -0.12
SPARC-209ENST00000539687 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
SPARC-209ENST00000539687 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
SPARC-209ENST00000539687 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
SPARC-209ENST00000539687 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
SPARC-209ENST00000539687 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
SPARC-209ENST00000539687 NEO1Q92859 1461 aa14.29□□□□□ -0.12
SPARC-209ENST00000539687 KANK1Q14678 1352 aa14.28□□□□□ -0.12
SPARC-209ENST00000539687 TSPOAP1O95153 1857 aa14.27□□□□□ -0.12
SPARC-209ENST00000539687 DEPDC5O75140 1603 aa14.27□□□□□ -0.12
SPARC-209ENST00000539687 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
SPARC-209ENST00000539687 DHX29Q7Z478 1369 aaKnown RBP14.24□□□□□ -0.13
SPARC-209ENST00000539687 ANP32CO43423 234 aa14.24□□□□□ -0.13
SPARC-209ENST00000539687 HSPA5P11021 654 aaKnown RBP14.24□□□□□ -0.13
SPARC-209ENST00000539687 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
SPARC-209ENST00000539687 GLI2P10070 1586 aa14.24□□□□□ -0.13
SPARC-209ENST00000539687 KDM5CP41229 1560 aa14.23□□□□□ -0.13
SPARC-209ENST00000539687 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
SPARC-209ENST00000539687 AFAP1Q8N556 730 aa14.23□□□□□ -0.13
SPARC-209ENST00000539687 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
SPARC-209ENST00000539687 POGZQ7Z3K3 1410 aa14.23□□□□□ -0.13
SPARC-209ENST00000539687 ARID4BQ4LE39 1312 aaPredicted RBP14.22□□□□□ -0.13
SPARC-209ENST00000539687 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
SPARC-209ENST00000539687 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
SPARC-209ENST00000539687 TET3O43151 1660 aa14.22□□□□□ -0.13
SPARC-209ENST00000539687 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
SPARC-209ENST00000539687 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.13
SPARC-209ENST00000539687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.13
SPARC-209ENST00000539687 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.14
SPARC-209ENST00000539687 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.14
SPARC-209ENST00000539687 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
SPARC-209ENST00000539687 SPATA31E1Q6ZUB1 1445 aa14.2□□□□□ -0.14
SPARC-209ENST00000539687 HECW2Q9P2P5 1572 aa14.2□□□□□ -0.14
SPARC-209ENST00000539687 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
SPARC-209ENST00000539687 TRPM2O94759 1503 aa14.19□□□□□ -0.14
SPARC-209ENST00000539687 A2MP01023 1474 aa14.18□□□□□ -0.14
SPARC-209ENST00000539687 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
SPARC-209ENST00000539687 KIDINS220Q9ULH0 1771 aa14.18□□□□□ -0.14
SPARC-209ENST00000539687 MAP3K4Q9Y6R4 1608 aa14.18□□□□□ -0.14
SPARC-209ENST00000539687 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
SPARC-209ENST00000539687 LAMC1P11047 1609 aa14.17□□□□□ -0.14
SPARC-209ENST00000539687 RNF17Q9BXT8 1623 aaKnown RBP14.17□□□□□ -0.14
SPARC-209ENST00000539687 USP47Q96K76 1375 aa14.17□□□□□ -0.14
SPARC-209ENST00000539687 PLA2R1Q13018 1463 aa14.17□□□□□ -0.14
SPARC-209ENST00000539687 PTPRTO14522 1441 aa14.16□□□□□ -0.14
SPARC-209ENST00000539687 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
SPARC-209ENST00000539687 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
SPARC-209ENST00000539687 E9PCH4 1651 aa14.15□□□□□ -0.14
SPARC-209ENST00000539687 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
SPARC-209ENST00000539687 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
SPARC-209ENST00000539687 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
SPARC-209ENST00000539687 SPHKAPQ2M3C7 1700 aa14.15□□□□□ -0.14
SPARC-209ENST00000539687 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
SPARC-209ENST00000539687 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
SPARC-209ENST00000539687 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
SPARC-209ENST00000539687 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
SPARC-209ENST00000539687 KIF3BO15066 747 aa14.13□□□□□ -0.15
SPARC-209ENST00000539687 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
SPARC-209ENST00000539687 EFCAB6Q5THR3 1501 aa14.12□□□□□ -0.15
SPARC-209ENST00000539687 CARD11Q9BXL7 1154 aa14.12□□□□□ -0.15
SPARC-209ENST00000539687 CEP152O94986 1710 aa14.12□□□□□ -0.15
SPARC-209ENST00000539687 MROH1Q8NDA8 1641 aa14.12□□□□□ -0.15
SPARC-209ENST00000539687 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
SPARC-209ENST00000539687 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
SPARC-209ENST00000539687 TRPM1Q7Z4N2 1603 aa14.11□□□□□ -0.15
SPARC-209ENST00000539687 KCNA4P22459 653 aa14.09□□□□□ -0.15
SPARC-209ENST00000539687 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
SPARC-209ENST00000539687 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
SPARC-209ENST00000539687 PPRC1Q5VV67 1664 aaKnown RBP14.07□□□□□ -0.16
SPARC-209ENST00000539687 ZMYM4Q5VZL5 1548 aa14.07□□□□□ -0.16
SPARC-209ENST00000539687 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
SPARC-209ENST00000539687 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
SPARC-209ENST00000539687 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
SPARC-209ENST00000539687 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
SPARC-209ENST00000539687 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
SPARC-209ENST00000539687 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
SPARC-209ENST00000539687 CLTCL1P53675 1640 aa14.05□□□□□ -0.16
SPARC-209ENST00000539687 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
SPARC-209ENST00000539687 RGL3Q3MIN7 710 aa14.04□□□□□ -0.16
SPARC-209ENST00000539687 MYOM2P54296 1465 aa14.04□□□□□ -0.16
SPARC-209ENST00000539687 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
SPARC-209ENST00000539687 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
SPARC-209ENST00000539687 MADDQ8WXG6 1647 aa14.02□□□□□ -0.16
SPARC-209ENST00000539687 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
SPARC-209ENST00000539687 KIF1BO60333 1816 aa14.01□□□□□ -0.17
SPARC-209ENST00000539687 ABCC3O15438 1527 aa14.01□□□□□ -0.17
SPARC-209ENST00000539687 ARHGAP31Q2M1Z3 1444 aa14.01□□□□□ -0.17
SPARC-209ENST00000539687 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
SPARC-209ENST00000539687 WASHC2CQ9Y4E1 1318 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms