RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 POGZQ7Z3K3 1410 aa24.37■■□□□ 1.49
PCDHB17P-201ENST00000539533 DIP2BQ9P265 1576 aa24.36■■□□□ 1.49
PCDHB17P-201ENST00000539533 KIDINS220Q9ULH0 1771 aa24.35■■□□□ 1.49
PCDHB17P-201ENST00000539533 RAPGEF3O95398 923 aa24.34■■□□□ 1.49
PCDHB17P-201ENST00000539533 MAGI2Q86UL8 1455 aa24.33■■□□□ 1.49
PCDHB17P-201ENST00000539533 IQGAP3Q86VI3 1631 aa24.32■■□□□ 1.48
PCDHB17P-201ENST00000539533 KDM5CP41229 1560 aa24.32■■□□□ 1.48
PCDHB17P-201ENST00000539533 DHX29Q7Z478 1369 aaKnown RBP24.31■■□□□ 1.48
PCDHB17P-201ENST00000539533 TEX14Q8IWB6 1497 aa24.29■■□□□ 1.48
PCDHB17P-201ENST00000539533 KIF3BO15066 747 aa24.28■■□□□ 1.48
PCDHB17P-201ENST00000539533 MLH3Q9UHC1 1453 aa24.27■■□□□ 1.48
PCDHB17P-201ENST00000539533 TSPOAP1O95153 1857 aa24.25■■□□□ 1.47
PCDHB17P-201ENST00000539533 HECW2Q9P2P5 1572 aa24.25■■□□□ 1.47
PCDHB17P-201ENST00000539533 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
PCDHB17P-201ENST00000539533 A2MP01023 1474 aa24.22■■□□□ 1.47
PCDHB17P-201ENST00000539533 HIRIP3Q9BW71 556 aaPredicted RBP24.22■■□□□ 1.47
PCDHB17P-201ENST00000539533 PLA2R1Q13018 1463 aa24.21■■□□□ 1.47
PCDHB17P-201ENST00000539533 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
PCDHB17P-201ENST00000539533 RICTORQ6R327 1708 aa24.2■■□□□ 1.47
PCDHB17P-201ENST00000539533 PPRC1Q5VV67 1664 aaKnown RBP24.2■■□□□ 1.47
PCDHB17P-201ENST00000539533 NBPF8Q3BBV2 869 aa24.2■■□□□ 1.46
PCDHB17P-201ENST00000539533 ABCA6Q8N139 1617 aa24.18■■□□□ 1.46
PCDHB17P-201ENST00000539533 FRMPD1Q5SYB0 1578 aa24.17■■□□□ 1.46
PCDHB17P-201ENST00000539533 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
PCDHB17P-201ENST00000539533 KIF13AQ9H1H9 1805 aa24.16■■□□□ 1.46
PCDHB17P-201ENST00000539533 KANK1Q14678 1352 aa24.16■■□□□ 1.46
PCDHB17P-201ENST00000539533 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
PCDHB17P-201ENST00000539533 VWDEQ8N2E2 1590 aa24.15■■□□□ 1.46
PCDHB17P-201ENST00000539533 E9PCH4 1651 aa24.14■■□□□ 1.45
PCDHB17P-201ENST00000539533 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
PCDHB17P-201ENST00000539533 YEATS2Q9ULM3 1422 aa24.12■■□□□ 1.45
PCDHB17P-201ENST00000539533 ATP10AO60312 1499 aa24.12■■□□□ 1.45
PCDHB17P-201ENST00000539533 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
PCDHB17P-201ENST00000539533 TET3O43151 1660 aa24.1■■□□□ 1.45
PCDHB17P-201ENST00000539533 GGT6Q6P531 493 aa24.1■■□□□ 1.45
PCDHB17P-201ENST00000539533 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
PCDHB17P-201ENST00000539533 RGL3Q3MIN7 710 aa24.08■■□□□ 1.44
PCDHB17P-201ENST00000539533 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.44
PCDHB17P-201ENST00000539533 RNF17Q9BXT8 1623 aaKnown RBP24.08■■□□□ 1.44
PCDHB17P-201ENST00000539533 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
PCDHB17P-201ENST00000539533 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
PCDHB17P-201ENST00000539533 ZMYM4Q5VZL5 1548 aa24.04■■□□□ 1.44
PCDHB17P-201ENST00000539533 PTPRTO14522 1441 aa24.03■■□□□ 1.44
PCDHB17P-201ENST00000539533 BCORL1Q5H9F3 1711 aa24.03■■□□□ 1.44
PCDHB17P-201ENST00000539533 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
PCDHB17P-201ENST00000539533 CEP152O94986 1710 aa24.02■■□□□ 1.44
PCDHB17P-201ENST00000539533 COL17A1Q9UMD9 1497 aaPredicted RBP24.01■■□□□ 1.43
PCDHB17P-201ENST00000539533 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
PCDHB17P-201ENST00000539533 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
PCDHB17P-201ENST00000539533 TRPM2O94759 1503 aa24.01■■□□□ 1.43
PCDHB17P-201ENST00000539533 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
PCDHB17P-201ENST00000539533 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
PCDHB17P-201ENST00000539533 WASHC2CQ9Y4E1 1318 aa23.99■■□□□ 1.43
PCDHB17P-201ENST00000539533 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
PCDHB17P-201ENST00000539533 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
PCDHB17P-201ENST00000539533 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.42
PCDHB17P-201ENST00000539533 ABCC3O15438 1527 aa23.94■■□□□ 1.42
PCDHB17P-201ENST00000539533 NPATQ14207 1427 aa23.92■■□□□ 1.42
PCDHB17P-201ENST00000539533 RALGAPBQ86X10 1494 aa23.92■■□□□ 1.42
PCDHB17P-201ENST00000539533 UGGT1Q9NYU2 1555 aa23.92■■□□□ 1.42
PCDHB17P-201ENST00000539533 PRAG1Q86YV5 1406 aa23.91■■□□□ 1.42
PCDHB17P-201ENST00000539533 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
PCDHB17P-201ENST00000539533 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
PCDHB17P-201ENST00000539533 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
PCDHB17P-201ENST00000539533 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
PCDHB17P-201ENST00000539533 USP47Q96K76 1375 aa23.86■■□□□ 1.41
PCDHB17P-201ENST00000539533 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
PCDHB17P-201ENST00000539533 SUPT16HQ9Y5B9 1047 aaKnown RBP23.85■■□□□ 1.41
PCDHB17P-201ENST00000539533 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
PCDHB17P-201ENST00000539533 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
PCDHB17P-201ENST00000539533 ROCK2O75116 1388 aaKnown RBP23.83■■□□□ 1.41
PCDHB17P-201ENST00000539533 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.41
PCDHB17P-201ENST00000539533 SIGLEC1Q9BZZ2 1709 aa23.83■■□□□ 1.41
PCDHB17P-201ENST00000539533 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
PCDHB17P-201ENST00000539533 ZC3H13Q5T200 1668 aaKnown RBP23.81■■□□□ 1.4
PCDHB17P-201ENST00000539533 AGLP35573 1532 aa23.8■■□□□ 1.4
PCDHB17P-201ENST00000539533 ARHGEF40Q8TER5 1519 aa23.8■■□□□ 1.4
PCDHB17P-201ENST00000539533 CNTLNQ9NXG0 1405 aa23.8■■□□□ 1.4
PCDHB17P-201ENST00000539533 DNAJC5Q9H3Z4 198 aa23.79■■□□□ 1.4
PCDHB17P-201ENST00000539533 KIF1BO60333 1816 aa23.79■■□□□ 1.4
PCDHB17P-201ENST00000539533 ARHGAP31Q2M1Z3 1444 aa23.78■■□□□ 1.4
PCDHB17P-201ENST00000539533 MLECQ14165 292 aa23.78■■□□□ 1.4
PCDHB17P-201ENST00000539533 NOS1P29475 1434 aa23.78■■□□□ 1.4
PCDHB17P-201ENST00000539533 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
PCDHB17P-201ENST00000539533 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
PCDHB17P-201ENST00000539533 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
PCDHB17P-201ENST00000539533 MROH2AA6NES4 1674 aa23.75■■□□□ 1.39
PCDHB17P-201ENST00000539533 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
PCDHB17P-201ENST00000539533 GPRASP1Q5JY77 1395 aa23.74■■□□□ 1.39
PCDHB17P-201ENST00000539533 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
PCDHB17P-201ENST00000539533 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
PCDHB17P-201ENST00000539533 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
PCDHB17P-201ENST00000539533 SYNMO15061 1565 aa23.73■■□□□ 1.39
PCDHB17P-201ENST00000539533 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
PCDHB17P-201ENST00000539533 ADGRB3O60242 1522 aa23.71■■□□□ 1.39
PCDHB17P-201ENST00000539533 FBXO31Q5XUX0 539 aaPredicted RBP23.7■■□□□ 1.38
PCDHB17P-201ENST00000539533 IDI1Q13907 227 aa23.69■■□□□ 1.38
PCDHB17P-201ENST00000539533 ADGRF5Q8IZF2 1346 aa23.69■■□□□ 1.38
PCDHB17P-201ENST00000539533 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
PCDHB17P-201ENST00000539533 POLR1AO95602 1720 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms