RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 RAPGEF3O95398 923 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 SPNS2Q8IVW8 549 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 EFCAB5A4FU69 1503 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 SNPHO15079 494 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
CCDC144NL-203ENST00000539484 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 BCORL1Q5H9F3 1711 aa14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
CCDC144NL-203ENST00000539484 RICTORQ6R327 1708 aa14.91□□□□□ -0.02
CCDC144NL-203ENST00000539484 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 FANCAO15360 1455 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 ATP1B4Q9UN42 357 aaPredicted RBP14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 PTPRMP28827 1452 aa14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 MARVELD3Q96A59 401 aa14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 MADDQ8WXG6 1647 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 CDK13Q14004 1512 aaKnown RBP14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
CCDC144NL-203ENST00000539484 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
CCDC144NL-203ENST00000539484 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
CCDC144NL-203ENST00000539484 MYO5CQ9NQX4 1742 aa14.84□□□□□ -0.03
CCDC144NL-203ENST00000539484 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
CCDC144NL-203ENST00000539484 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 PYGBP11216 843 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
CCDC144NL-203ENST00000539484 FER1L4A9Z1Z3 1794 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PLCH2O75038 1416 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 KIF14Q15058 1648 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 EFCAB2Q5VUJ9 269 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 CLIP1P30622 1438 aa14.77□□□□□ -0.04
CCDC144NL-203ENST00000539484 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 MLECQ14165 292 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
CCDC144NL-203ENST00000539484 EMP3P54852 163 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 FBXO41Q8TF61 875 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 LMTK3Q96Q04 1460 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 ATP10AO60312 1499 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 C9orf84Q5VXU9 1444 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.05
CCDC144NL-203ENST00000539484 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.06
CCDC144NL-203ENST00000539484 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 HSPA2P54652 639 aa14.68□□□□□ -0.06
CCDC144NL-203ENST00000539484 PDCD7Q8N8D1 485 aaKnown RBP14.68□□□□□ -0.06
CCDC144NL-203ENST00000539484 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
CCDC144NL-203ENST00000539484 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 KDM5CP41229 1560 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 AFAP1Q8N556 730 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 ESF1Q9H501 851 aaKnown RBP14.64□□□□□ -0.07
CCDC144NL-203ENST00000539484 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 HS3ST6Q96QI5 342 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
CCDC144NL-203ENST00000539484 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ZNF467Q7Z7K2 595 aaPredicted RBP14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 KRTAP3-3Q9BYR6 98 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 KRTAP3-2Q9BYR7 98 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 FYCO1Q9BQS8 1478 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ABCC1P33527 1531 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
CCDC144NL-203ENST00000539484 MLH3Q9UHC1 1453 aa14.59□□□□□ -0.07
CCDC144NL-203ENST00000539484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.59□□□□□ -0.072e-9■■■■■ 42.1
CCDC144NL-203ENST00000539484 FKBP8Q14318 412 aa14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
CCDC144NL-203ENST00000539484 TRAPPC8Q9Y2L5 1435 aa14.57□□□□□ -0.08
CCDC144NL-203ENST00000539484 C3P01024 1663 aa14.56□□□□□ -0.08
CCDC144NL-203ENST00000539484 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
CCDC144NL-203ENST00000539484 AGLP35573 1532 aa14.55□□□□□ -0.08
CCDC144NL-203ENST00000539484 GSE1Q14687 1217 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms