RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 FOXD1Q16676 465 aa23.12■■□□□ 1.29
TMEM258-204ENST00000537328 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
TMEM258-204ENST00000537328 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
TMEM258-204ENST00000537328 UNC13BO14795 1591 aa23.09■■□□□ 1.29
TMEM258-204ENST00000537328 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
TMEM258-204ENST00000537328 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
TMEM258-204ENST00000537328 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
TMEM258-204ENST00000537328 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
TMEM258-204ENST00000537328 PTPRMP28827 1452 aa23.06■■□□□ 1.28
TMEM258-204ENST00000537328 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
TMEM258-204ENST00000537328 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
TMEM258-204ENST00000537328 AFAP1Q8N556 730 aa23.04■■□□□ 1.28
TMEM258-204ENST00000537328 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
TMEM258-204ENST00000537328 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
TMEM258-204ENST00000537328 FER1L4A9Z1Z3 1794 aa23■■□□□ 1.27
TMEM258-204ENST00000537328 ATP7AQ04656 1500 aa23■■□□□ 1.27
TMEM258-204ENST00000537328 IQGAP3Q86VI3 1631 aa23■■□□□ 1.27
TMEM258-204ENST00000537328 INO80Q9ULG1 1556 aaPredicted RBP22.98■■□□□ 1.27
TMEM258-204ENST00000537328 SIGLEC1Q9BZZ2 1709 aa22.98■■□□□ 1.27
TMEM258-204ENST00000537328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.97■■□□□ 1.27
TMEM258-204ENST00000537328 MYT1LQ9UL68 1186 aa22.97■■□□□ 1.27
TMEM258-204ENST00000537328 KANK1Q14678 1352 aa22.96■■□□□ 1.27
TMEM258-204ENST00000537328 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
TMEM258-204ENST00000537328 KDM5CP41229 1560 aa22.95■■□□□ 1.26
TMEM258-204ENST00000537328 EIF4G2P78344 907 aaKnown RBP eCLIP22.95■■□□□ 1.26
TMEM258-204ENST00000537328 MIER1Q8N108 512 aa22.93■■□□□ 1.26
TMEM258-204ENST00000537328 ATP10AO60312 1499 aa22.92■■□□□ 1.26
TMEM258-204ENST00000537328 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
TMEM258-204ENST00000537328 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
TMEM258-204ENST00000537328 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
TMEM258-204ENST00000537328 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
TMEM258-204ENST00000537328 DIP2CQ9Y2E4 1556 aa22.87■■□□□ 1.25
TMEM258-204ENST00000537328 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
TMEM258-204ENST00000537328 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
TMEM258-204ENST00000537328 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
TMEM258-204ENST00000537328 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
TMEM258-204ENST00000537328 MLECQ14165 292 aa22.85■■□□□ 1.25
TMEM258-204ENST00000537328 NBPF8Q3BBV2 869 aa22.84■■□□□ 1.25
TMEM258-204ENST00000537328 KIF3BO15066 747 aa22.83■■□□□ 1.25
TMEM258-204ENST00000537328 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
TMEM258-204ENST00000537328 LMTK3Q96Q04 1460 aa22.83■■□□□ 1.25
TMEM258-204ENST00000537328 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
TMEM258-204ENST00000537328 A2MP01023 1474 aa22.82■■□□□ 1.24
TMEM258-204ENST00000537328 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
TMEM258-204ENST00000537328 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
TMEM258-204ENST00000537328 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
TMEM258-204ENST00000537328 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
TMEM258-204ENST00000537328 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
TMEM258-204ENST00000537328 TET3O43151 1660 aa22.77■■□□□ 1.24
TMEM258-204ENST00000537328 PREX1Q8TCU6 1659 aa22.77■■□□□ 1.24
TMEM258-204ENST00000537328 PRDM15P57071 1507 aaPredicted RBP22.77■■□□□ 1.24
TMEM258-204ENST00000537328 DCAF11Q8TEB1 546 aa22.76■■□□□ 1.23
TMEM258-204ENST00000537328 HIRIP3Q9BW71 556 aaPredicted RBP22.76■■□□□ 1.23
TMEM258-204ENST00000537328 RALGAPBQ86X10 1494 aa22.76■■□□□ 1.23
TMEM258-204ENST00000537328 PTPRTO14522 1441 aa22.75■■□□□ 1.23
TMEM258-204ENST00000537328 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
TMEM258-204ENST00000537328 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
TMEM258-204ENST00000537328 TRPM2O94759 1503 aa22.72■■□□□ 1.23
TMEM258-204ENST00000537328 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
TMEM258-204ENST00000537328 ANP32CO43423 234 aa22.71■■□□□ 1.23
TMEM258-204ENST00000537328 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
TMEM258-204ENST00000537328 ILDR1Q86SU0 546 aaPredicted RBP22.71■■□□□ 1.23
TMEM258-204ENST00000537328 AGLP35573 1532 aa22.71■■□□□ 1.23
TMEM258-204ENST00000537328 E9PCH4 1651 aa22.69■■□□□ 1.22
TMEM258-204ENST00000537328 KDM2AQ9Y2K7 1162 aa22.69■■□□□ 1.22
TMEM258-204ENST00000537328 C3P01024 1663 aa22.68■■□□□ 1.22
TMEM258-204ENST00000537328 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
TMEM258-204ENST00000537328 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
TMEM258-204ENST00000537328 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
TMEM258-204ENST00000537328 USP47Q96K76 1375 aa22.66■■□□□ 1.22
TMEM258-204ENST00000537328 NEURL4Q96JN8 1562 aa22.66■■□□□ 1.22
TMEM258-204ENST00000537328 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
TMEM258-204ENST00000537328 RGL3Q3MIN7 710 aa22.65■■□□□ 1.22
TMEM258-204ENST00000537328 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
TMEM258-204ENST00000537328 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.22
TMEM258-204ENST00000537328 CCER2I3L3R5 266 aa22.64■■□□□ 1.21
TMEM258-204ENST00000537328 SPHKAPQ2M3C7 1700 aa22.64■■□□□ 1.21
TMEM258-204ENST00000537328 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
TMEM258-204ENST00000537328 HSPA2P54652 639 aa22.63■■□□□ 1.21
TMEM258-204ENST00000537328 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
TMEM258-204ENST00000537328 MROH2AA6NES4 1674 aa22.62■■□□□ 1.21
TMEM258-204ENST00000537328 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
TMEM258-204ENST00000537328 GPRASP1Q5JY77 1395 aa22.6■■□□□ 1.21
TMEM258-204ENST00000537328 GGT6Q6P531 493 aa22.59■■□□□ 1.21
TMEM258-204ENST00000537328 WASHC2CQ9Y4E1 1318 aa22.58■■□□□ 1.21
TMEM258-204ENST00000537328 SETD1BQ9UPS6 1966 aaKnown RBP22.58■■□□□ 1.21
TMEM258-204ENST00000537328 CEBPAP49715 358 aaPredicted RBP22.57■■□□□ 1.2
TMEM258-204ENST00000537328 CEP152O94986 1710 aa22.57■■□□□ 1.2
TMEM258-204ENST00000537328 LAMC1P11047 1609 aa22.57■■□□□ 1.2
TMEM258-204ENST00000537328 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
TMEM258-204ENST00000537328 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
TMEM258-204ENST00000537328 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
TMEM258-204ENST00000537328 POLR1AO95602 1720 aaPredicted RBP22.54■■□□□ 1.2
TMEM258-204ENST00000537328 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
TMEM258-204ENST00000537328 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
TMEM258-204ENST00000537328 KIF7Q2M1P5 1343 aa22.54■■□□□ 1.2
TMEM258-204ENST00000537328 ABCC3O15438 1527 aa22.52■■□□□ 1.2
TMEM258-204ENST00000537328 ARHGAP31Q2M1Z3 1444 aa22.52■■□□□ 1.2
TMEM258-204ENST00000537328 ZC3H13Q5T200 1668 aaKnown RBP22.51■■□□□ 1.19
TMEM258-204ENST00000537328 C11orf95C9JLR9 678 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms