RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
PRKDC-206ENST00000536429 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.84
PRKDC-206ENST00000536429 NCOA1Q15788 1441 aa20.27■□□□□ 0.84
PRKDC-206ENST00000536429 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.84
PRKDC-206ENST00000536429 ANKRD30AQ9BXX3 1397 aa20.27■□□□□ 0.84
PRKDC-206ENST00000536429 KDM5DQ9BY66 1539 aa20.26■□□□□ 0.83
PRKDC-206ENST00000536429 NPATQ14207 1427 aa20.26■□□□□ 0.83
PRKDC-206ENST00000536429 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
PRKDC-206ENST00000536429 RNF17Q9BXT8 1623 aaKnown RBP20.25■□□□□ 0.83
PRKDC-206ENST00000536429 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
PRKDC-206ENST00000536429 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
PRKDC-206ENST00000536429 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
PRKDC-206ENST00000536429 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
PRKDC-206ENST00000536429 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
PRKDC-206ENST00000536429 ABCC3O15438 1527 aa20.22■□□□□ 0.83
PRKDC-206ENST00000536429 ITGAEP38570 1179 aa20.21■□□□□ 0.83
PRKDC-206ENST00000536429 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
PRKDC-206ENST00000536429 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
PRKDC-206ENST00000536429 PZPP20742 1482 aa20.19■□□□□ 0.82
PRKDC-206ENST00000536429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRKDC-206ENST00000536429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKDC-206ENST00000536429 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
PRKDC-206ENST00000536429 TNRQ92752 1358 aa20.16■□□□□ 0.82
PRKDC-206ENST00000536429 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
PRKDC-206ENST00000536429 ANKRD50Q9ULJ7 1429 aa20.15■□□□□ 0.82
PRKDC-206ENST00000536429 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
PRKDC-206ENST00000536429 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
PRKDC-206ENST00000536429 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
PRKDC-206ENST00000536429 CEP152O94986 1710 aa20.11■□□□□ 0.81
PRKDC-206ENST00000536429 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
PRKDC-206ENST00000536429 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
PRKDC-206ENST00000536429 STRCQ7RTU9 1775 aa20.09■□□□□ 0.81
PRKDC-206ENST00000536429 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
PRKDC-206ENST00000536429 CAMSAP1Q5T5Y3 1602 aa20.09■□□□□ 0.81
PRKDC-206ENST00000536429 KANK1Q14678 1352 aa20.08■□□□□ 0.81
PRKDC-206ENST00000536429 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.81
PRKDC-206ENST00000536429 A2ML1A8K2U0 1454 aa20.08■□□□□ 0.81
PRKDC-206ENST00000536429 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
PRKDC-206ENST00000536429 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
PRKDC-206ENST00000536429 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
PRKDC-206ENST00000536429 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
PRKDC-206ENST00000536429 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
PRKDC-206ENST00000536429 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
PRKDC-206ENST00000536429 PLA2R1Q13018 1463 aa20.01■□□□□ 0.79
PRKDC-206ENST00000536429 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
PRKDC-206ENST00000536429 PTPRTO14522 1441 aa20■□□□□ 0.79
PRKDC-206ENST00000536429 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
PRKDC-206ENST00000536429 UNC13BO14795 1591 aa19.99■□□□□ 0.79
PRKDC-206ENST00000536429 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
PRKDC-206ENST00000536429 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
PRKDC-206ENST00000536429 NAIPQ13075 1403 aa19.97■□□□□ 0.79
PRKDC-206ENST00000536429 PKD2Q13563 968 aa19.97■□□□□ 0.79
PRKDC-206ENST00000536429 NUP155O75694 1391 aa19.95■□□□□ 0.79
PRKDC-206ENST00000536429 NOS1P29475 1434 aa19.95■□□□□ 0.78
PRKDC-206ENST00000536429 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
PRKDC-206ENST00000536429 SYNMO15061 1565 aa19.93■□□□□ 0.78
PRKDC-206ENST00000536429 IDI1Q13907 227 aa19.93■□□□□ 0.78
PRKDC-206ENST00000536429 ILDR1Q86SU0 546 aaPredicted RBP19.93■□□□□ 0.78
PRKDC-206ENST00000536429 HFM1A2PYH4 1435 aa19.91■□□□□ 0.78
PRKDC-206ENST00000536429 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
PRKDC-206ENST00000536429 TET3O43151 1660 aa19.91■□□□□ 0.78
PRKDC-206ENST00000536429 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
PRKDC-206ENST00000536429 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
PRKDC-206ENST00000536429 IQGAP3Q86VI3 1631 aa19.9■□□□□ 0.78
PRKDC-206ENST00000536429 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
PRKDC-206ENST00000536429 ZNF335Q9H4Z2 1342 aaPredicted RBP19.88■□□□□ 0.77
PRKDC-206ENST00000536429 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
PRKDC-206ENST00000536429 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
PRKDC-206ENST00000536429 LTKP29376 864 aa19.86■□□□□ 0.77
PRKDC-206ENST00000536429 E9PCH4 1651 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 LTBP4Q8N2S1 1624 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 SLC52A1Q9NWF4 448 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 ARHGAP23Q9P227 1491 aa19.85■□□□□ 0.77
PRKDC-206ENST00000536429 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
PRKDC-206ENST00000536429 MED14O60244 1454 aa19.83■□□□□ 0.76
PRKDC-206ENST00000536429 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.76
PRKDC-206ENST00000536429 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
PRKDC-206ENST00000536429 SLIT1O75093 1534 aa19.82■□□□□ 0.76
PRKDC-206ENST00000536429 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
PRKDC-206ENST00000536429 FBXO41Q8TF61 875 aa19.82■□□□□ 0.76
PRKDC-206ENST00000536429 SCAF11Q99590 1463 aaKnown RBP19.81■□□□□ 0.76
PRKDC-206ENST00000536429 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
PRKDC-206ENST00000536429 ADGRB3O60242 1522 aa19.81■□□□□ 0.76
PRKDC-206ENST00000536429 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
PRKDC-206ENST00000536429 EID1Q9Y6B2 187 aa19.76■□□□□ 0.75
PRKDC-206ENST00000536429 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
PRKDC-206ENST00000536429 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
PRKDC-206ENST00000536429 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
PRKDC-206ENST00000536429 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
PRKDC-206ENST00000536429 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
PRKDC-206ENST00000536429 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
PRKDC-206ENST00000536429 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
PRKDC-206ENST00000536429 FOXD1Q16676 465 aa19.71■□□□□ 0.75
PRKDC-206ENST00000536429 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
PRKDC-206ENST00000536429 NUTM2DQ5VT03 806 aaPredicted RBP19.7■□□□□ 0.74
PRKDC-206ENST00000536429 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
PRKDC-206ENST00000536429 MYO5BQ9ULV0 1848 aa19.68■□□□□ 0.74
PRKDC-206ENST00000536429 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms