RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 MYBBP1AQ9BQG0 1328 aaKnown RBP25.22■■□□□ 1.63
CHPF-203ENST00000535926 RALBP1Q15311 655 aa25.21■■□□□ 1.63
CHPF-203ENST00000535926 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
CHPF-203ENST00000535926 BRD4O60885 1362 aaPredicted RBP25.2■■□□□ 1.63
CHPF-203ENST00000535926 NBPF1Q3BBV0 1214 aa25.2■■□□□ 1.62
CHPF-203ENST00000535926 RGL3Q3MIN7 710 aa25.2■■□□□ 1.62
CHPF-203ENST00000535926 CCDC141Q6ZP82 1450 aa25.2■■□□□ 1.62
CHPF-203ENST00000535926 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
CHPF-203ENST00000535926 ERICH6Q7L0X2 663 aa25.19■■□□□ 1.62
CHPF-203ENST00000535926 SAMD9LQ8IVG5 1584 aa25.19■■□□□ 1.62
CHPF-203ENST00000535926 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
CHPF-203ENST00000535926 RSPH4AQ5TD94 716 aa25.16■■□□□ 1.62
CHPF-203ENST00000535926 KTN1Q86UP2 1357 aaKnown RBP25.16■■□□□ 1.62
CHPF-203ENST00000535926 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
CHPF-203ENST00000535926 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
CHPF-203ENST00000535926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.14■■□□□ 1.62
CHPF-203ENST00000535926 CDC42BPBQ9Y5S2 1711 aa25.14■■□□□ 1.61
CHPF-203ENST00000535926 PER1O15534 1290 aaPredicted RBP25.13■■□□□ 1.61
CHPF-203ENST00000535926 SALL2Q9Y467 1007 aaPredicted RBP25.11■■□□□ 1.61
CHPF-203ENST00000535926 E9PCH4 1651 aa25.1■■□□□ 1.61
CHPF-203ENST00000535926 PARD3Q8TEW0 1356 aa25.09■■□□□ 1.61
CHPF-203ENST00000535926 PREX2Q70Z35 1606 aa25.09■■□□□ 1.61
CHPF-203ENST00000535926 NLRP13Q86W25 1043 aa25.09■■□□□ 1.61
CHPF-203ENST00000535926 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.6
CHPF-203ENST00000535926 TRPM1Q7Z4N2 1603 aa25.07■■□□□ 1.6
CHPF-203ENST00000535926 TESK2Q96S53 571 aa25.06■■□□□ 1.6
CHPF-203ENST00000535926 A2MP01023 1474 aa25.06■■□□□ 1.6
CHPF-203ENST00000535926 GPRASP1Q5JY77 1395 aa25.06■■□□□ 1.6
CHPF-203ENST00000535926 RRP1P56182 461 aaKnown RBP25.04■■□□□ 1.6
CHPF-203ENST00000535926 DISP3Q9P2K9 1392 aa25.03■■□□□ 1.6
CHPF-203ENST00000535926 PLEKHH2Q8IVE3 1493 aa25.03■■□□□ 1.6
CHPF-203ENST00000535926 BCL11AQ9H165 835 aa25.03■■□□□ 1.6
CHPF-203ENST00000535926 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
CHPF-203ENST00000535926 TTC37Q6PGP7 1564 aa25.01■■□□□ 1.59
CHPF-203ENST00000535926 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
CHPF-203ENST00000535926 EXOC6Q8TAG9 804 aa25.01■■□□□ 1.59
CHPF-203ENST00000535926 RCAN3Q9UKA8 241 aa25.01■■□□□ 1.59
CHPF-203ENST00000535926 PAK3O75914 559 aaPredicted RBP25■■□□□ 1.59
CHPF-203ENST00000535926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
CHPF-203ENST00000535926 UNC13BO14795 1591 aa24.99■■□□□ 1.59
CHPF-203ENST00000535926 CDCA7LQ96GN5 454 aa24.99■■□□□ 1.59
CHPF-203ENST00000535926 PANK3Q9H999 370 aa24.99■■□□□ 1.59
CHPF-203ENST00000535926 NOP58Q9Y2X3 529 aaKnown RBP24.99■■□□□ 1.59
CHPF-203ENST00000535926 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
CHPF-203ENST00000535926 MAST1Q9Y2H9 1570 aa24.98■■□□□ 1.59
CHPF-203ENST00000535926 PDE3BQ13370 1112 aa24.95■■□□□ 1.58
CHPF-203ENST00000535926 PRDM15P57071 1507 aaPredicted RBP24.95■■□□□ 1.58
CHPF-203ENST00000535926 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
CHPF-203ENST00000535926 ERBINQ96RT1 1412 aa24.94■■□□□ 1.58
CHPF-203ENST00000535926 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
CHPF-203ENST00000535926 TMF1P82094 1093 aa24.91■■□□□ 1.58
CHPF-203ENST00000535926 ATP10AO60312 1499 aa24.89■■□□□ 1.58
CHPF-203ENST00000535926 PLXNC1O60486 1568 aa24.89■■□□□ 1.57
CHPF-203ENST00000535926 IPO9Q96P70 1041 aaKnown RBP24.88■■□□□ 1.57
CHPF-203ENST00000535926 LAMC1P11047 1609 aa24.88■■□□□ 1.57
CHPF-203ENST00000535926 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
CHPF-203ENST00000535926 DUOX2Q9NRD8 1548 aa24.87■■□□□ 1.57
CHPF-203ENST00000535926 ANP32AP39687 249 aaKnown RBP24.87■■□□□ 1.57
CHPF-203ENST00000535926 PLIN1O60240 522 aa24.86■■□□□ 1.57
CHPF-203ENST00000535926 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
CHPF-203ENST00000535926 BLMP54132 1417 aaPredicted RBP24.85■■□□□ 1.57
CHPF-203ENST00000535926 MYO5CQ9NQX4 1742 aa24.84■■□□□ 1.57
CHPF-203ENST00000535926 ABCC2Q92887 1545 aa24.84■■□□□ 1.57
CHPF-203ENST00000535926 CHD1O14646 1710 aa24.83■■□□□ 1.56
CHPF-203ENST00000535926 PLCH2O75038 1416 aa24.82■■□□□ 1.56
CHPF-203ENST00000535926 NBR1Q14596 966 aa24.82■■□□□ 1.56
CHPF-203ENST00000535926 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
CHPF-203ENST00000535926 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
CHPF-203ENST00000535926 INSRP06213 1382 aa24.81■■□□□ 1.56
CHPF-203ENST00000535926 ADAMTS8Q9UP79 889 aa24.81■■□□□ 1.56
CHPF-203ENST00000535926 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
CHPF-203ENST00000535926 TRAPPC8Q9Y2L5 1435 aa24.8■■□□□ 1.56
CHPF-203ENST00000535926 TCERG1O14776 1098 aaKnown RBP24.79■■□□□ 1.56
CHPF-203ENST00000535926 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
CHPF-203ENST00000535926 ZBTB47Q9UFB7 747 aaPredicted RBP24.77■■□□□ 1.56
CHPF-203ENST00000535926 WDR7Q9Y4E6 1490 aa24.77■■□□□ 1.56
CHPF-203ENST00000535926 ZMYM4Q5VZL5 1548 aa24.76■■□□□ 1.55
CHPF-203ENST00000535926 PDE4AP27815 886 aa24.75■■□□□ 1.55
CHPF-203ENST00000535926 DEKP35659 375 aaKnown RBP24.75■■□□□ 1.55
CHPF-203ENST00000535926 AFAP1Q8N556 730 aa24.75■■□□□ 1.55
CHPF-203ENST00000535926 PPP2R1AP30153 589 aa24.74■■□□□ 1.55
CHPF-203ENST00000535926 CRBNQ96SW2 442 aa24.74■■□□□ 1.55
CHPF-203ENST00000535926 KNSTRNQ9Y448 316 aa24.74■■□□□ 1.55
CHPF-203ENST00000535926 AMER1Q5JTC6 1135 aaPredicted RBP24.73■■□□□ 1.55
CHPF-203ENST00000535926 RNF17Q9BXT8 1623 aaKnown RBP24.73■■□□□ 1.55
CHPF-203ENST00000535926 NPM2Q86SE8 214 aaKnown RBP24.72■■□□□ 1.55
CHPF-203ENST00000535926 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
CHPF-203ENST00000535926 BACH2Q9BYV9 841 aa24.71■■□□□ 1.55
CHPF-203ENST00000535926 C20orf194Q5TEA3 1177 aa24.71■■□□□ 1.55
CHPF-203ENST00000535926 SPAG9O60271 1321 aaKnown RBP24.7■■□□□ 1.54
CHPF-203ENST00000535926 ABCC1P33527 1531 aa24.7■■□□□ 1.54
CHPF-203ENST00000535926 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
CHPF-203ENST00000535926 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
CHPF-203ENST00000535926 MS4A1P11836 297 aa24.67■■□□□ 1.54
CHPF-203ENST00000535926 DUSP27Q5VZP5 1158 aa24.65■■□□□ 1.54
CHPF-203ENST00000535926 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
CHPF-203ENST00000535926 PTPRTO14522 1441 aa24.65■■□□□ 1.54
CHPF-203ENST00000535926 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
CHPF-203ENST00000535926 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.53
CHPF-203ENST00000535926 ZNF521Q96K83 1311 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms