RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 RNF17Q9BXT8 1623 aaKnown RBP20.22■□□□□ 0.83
CHFR-210ENST00000535527 EIF2AK4Q9P2K8 1649 aaKnown RBP20.22■□□□□ 0.83
CHFR-210ENST00000535527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHFR-210ENST00000535527 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
CHFR-210ENST00000535527 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
CHFR-210ENST00000535527 DUOX2Q9NRD8 1548 aa20.18■□□□□ 0.82
CHFR-210ENST00000535527 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
CHFR-210ENST00000535527 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
CHFR-210ENST00000535527 CLTCQ00610 1675 aaKnown RBP20.18■□□□□ 0.82
CHFR-210ENST00000535527 NCOA1Q15788 1441 aa20.18■□□□□ 0.82
CHFR-210ENST00000535527 LTBP4Q8N2S1 1624 aa20.17■□□□□ 0.82
CHFR-210ENST00000535527 GCC2Q8IWJ2 1684 aa20.17■□□□□ 0.82
CHFR-210ENST00000535527 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
CHFR-210ENST00000535527 DHX29Q7Z478 1369 aaKnown RBP20.17■□□□□ 0.82
CHFR-210ENST00000535527 CEP152O94986 1710 aa20.16■□□□□ 0.82
CHFR-210ENST00000535527 KIF15Q9NS87 1388 aa20.16■□□□□ 0.82
CHFR-210ENST00000535527 C3P01024 1663 aa20.16■□□□□ 0.82
CHFR-210ENST00000535527 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
CHFR-210ENST00000535527 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
CHFR-210ENST00000535527 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
CHFR-210ENST00000535527 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
CHFR-210ENST00000535527 CNTLNQ9NXG0 1405 aa20.11■□□□□ 0.81
CHFR-210ENST00000535527 ITGAEP38570 1179 aa20.1■□□□□ 0.81
CHFR-210ENST00000535527 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
CHFR-210ENST00000535527 ERBINQ96RT1 1412 aa20.1■□□□□ 0.81
CHFR-210ENST00000535527 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.81
CHFR-210ENST00000535527 UNC13BO14795 1591 aa20.08■□□□□ 0.81
CHFR-210ENST00000535527 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.8
CHFR-210ENST00000535527 ROCK1Q13464 1354 aa20.08■□□□□ 0.8
CHFR-210ENST00000535527 ZC3H13Q5T200 1668 aaKnown RBP20.07■□□□□ 0.8
CHFR-210ENST00000535527 ABCC3O15438 1527 aa20.06■□□□□ 0.8
CHFR-210ENST00000535527 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
CHFR-210ENST00000535527 NPATQ14207 1427 aa20.05■□□□□ 0.8
CHFR-210ENST00000535527 KDM5DQ9BY66 1539 aa20.05■□□□□ 0.8
CHFR-210ENST00000535527 NAIPQ13075 1403 aa20.03■□□□□ 0.8
CHFR-210ENST00000535527 KIF3BO15066 747 aa20.03■□□□□ 0.8
CHFR-210ENST00000535527 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
CHFR-210ENST00000535527 UBAP1LF5GYI3 381 aa20.01■□□□□ 0.79
CHFR-210ENST00000535527 FAM135AQ9P2D6 1515 aa20.01■□□□□ 0.79
CHFR-210ENST00000535527 PKD2Q13563 968 aa20■□□□□ 0.79
CHFR-210ENST00000535527 GGT6Q6P531 493 aa19.99■□□□□ 0.79
CHFR-210ENST00000535527 IQGAP3Q86VI3 1631 aa19.98■□□□□ 0.79
CHFR-210ENST00000535527 ZMYM3Q14202 1370 aa19.98■□□□□ 0.79
CHFR-210ENST00000535527 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
CHFR-210ENST00000535527 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
CHFR-210ENST00000535527 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
CHFR-210ENST00000535527 NCKAP5LQ9HCH0 1330 aa19.97■□□□□ 0.79
CHFR-210ENST00000535527 PLA2R1Q13018 1463 aa19.95■□□□□ 0.78
CHFR-210ENST00000535527 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
CHFR-210ENST00000535527 TET3O43151 1660 aa19.94■□□□□ 0.78
CHFR-210ENST00000535527 EFCAB6Q5THR3 1501 aa19.94■□□□□ 0.78
CHFR-210ENST00000535527 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
CHFR-210ENST00000535527 E9PCH4 1651 aa19.94■□□□□ 0.78
CHFR-210ENST00000535527 PZPP20742 1482 aa19.91■□□□□ 0.78
CHFR-210ENST00000535527 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
CHFR-210ENST00000535527 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
CHFR-210ENST00000535527 SYNMO15061 1565 aa19.87■□□□□ 0.77
CHFR-210ENST00000535527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHFR-210ENST00000535527 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
CHFR-210ENST00000535527 ERVK-7P63135 1459 aa19.86■□□□□ 0.77
CHFR-210ENST00000535527 WASHC2CQ9Y4E1 1318 aa19.84■□□□□ 0.77
CHFR-210ENST00000535527 TOM1O60784 492 aa19.84■□□□□ 0.77
CHFR-210ENST00000535527 FBXO31Q5XUX0 539 aaPredicted RBP19.84■□□□□ 0.77
CHFR-210ENST00000535527 ARHGAP31Q2M1Z3 1444 aa19.83■□□□□ 0.76
CHFR-210ENST00000535527 HSPA1LP34931 641 aa19.81■□□□□ 0.76
CHFR-210ENST00000535527 MYO5BQ9ULV0 1848 aa19.81■□□□□ 0.76
CHFR-210ENST00000535527 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
CHFR-210ENST00000535527 UGGT1Q9NYU2 1555 aa19.8■□□□□ 0.76
CHFR-210ENST00000535527 MED1Q15648 1581 aaPredicted RBP19.79■□□□□ 0.76
CHFR-210ENST00000535527 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
CHFR-210ENST00000535527 PIK3C2BO00750 1634 aa19.79■□□□□ 0.76
CHFR-210ENST00000535527 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
CHFR-210ENST00000535527 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
CHFR-210ENST00000535527 CPS1P31327 1500 aa19.78■□□□□ 0.76
CHFR-210ENST00000535527 NUP155O75694 1391 aa19.78■□□□□ 0.76
CHFR-210ENST00000535527 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
CHFR-210ENST00000535527 NOS1P29475 1434 aa19.77■□□□□ 0.76
CHFR-210ENST00000535527 UBR1Q8IWV7 1749 aa19.77■□□□□ 0.76
CHFR-210ENST00000535527 KANK1Q14678 1352 aa19.77■□□□□ 0.76
CHFR-210ENST00000535527 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
CHFR-210ENST00000535527 TNRQ92752 1358 aa19.75■□□□□ 0.75
CHFR-210ENST00000535527 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
CHFR-210ENST00000535527 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
CHFR-210ENST00000535527 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
CHFR-210ENST00000535527 POLR1AO95602 1720 aaPredicted RBP19.69■□□□□ 0.74
CHFR-210ENST00000535527 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
CHFR-210ENST00000535527 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
CHFR-210ENST00000535527 TRPM2O94759 1503 aa19.67■□□□□ 0.74
CHFR-210ENST00000535527 TMEM131LA2VDJ0 1609 aa19.67■□□□□ 0.74
CHFR-210ENST00000535527 THEMISQ8N1K5 641 aaPredicted RBP19.67■□□□□ 0.74
CHFR-210ENST00000535527 KDM5AP29375 1690 aaKnown RBP19.67■□□□□ 0.74
CHFR-210ENST00000535527 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
CHFR-210ENST00000535527 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
CHFR-210ENST00000535527 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
CHFR-210ENST00000535527 MED14O60244 1454 aa19.62■□□□□ 0.73
CHFR-210ENST00000535527 FOXD1Q16676 465 aa19.62■□□□□ 0.73
CHFR-210ENST00000535527 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
CHFR-210ENST00000535527 KIF1BO60333 1816 aa19.59■□□□□ 0.73
CHFR-210ENST00000535527 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
CHFR-210ENST00000535527 ALKQ9UM73 1620 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms