RNA–Protein interactions for RNA: ENST00000535318.6

CPNE2-202, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-202ENST00000535318 ARHGEF12Q9NZN5 1544 aa31.02■■■□□ 2.56
CPNE2-202ENST00000535318 RBM19Q9Y4C8 960 aaKnown RBP30.99■■■□□ 2.55
CPNE2-202ENST00000535318 ARID4BQ4LE39 1312 aaPredicted RBP30.99■■■□□ 2.55
CPNE2-202ENST00000535318 PLEKHH2Q8IVE3 1493 aa30.99■■■□□ 2.55
CPNE2-202ENST00000535318 DCAF11Q8TEB1 546 aa30.98■■■□□ 2.55
CPNE2-202ENST00000535318 MAST1Q9Y2H9 1570 aa30.96■■■□□ 2.55
CPNE2-202ENST00000535318 WDR7Q9Y4E6 1490 aa30.96■■■□□ 2.55
CPNE2-202ENST00000535318 FAM135AQ9P2D6 1515 aa30.94■■■□□ 2.54
CPNE2-202ENST00000535318 ST20-MTHFSA0A0A6YYL1 179 aa30.92■■■□□ 2.54
CPNE2-202ENST00000535318 EFCAB2Q5VUJ9 269 aa30.91■■■□□ 2.54
CPNE2-202ENST00000535318 ERICH6BQ5W0A0 696 aa30.89■■■□□ 2.53
CPNE2-202ENST00000535318 ABCC1P33527 1531 aa30.88■■■□□ 2.53
CPNE2-202ENST00000535318 ROCK2O75116 1388 aaKnown RBP30.88■■■□□ 2.53
CPNE2-202ENST00000535318 ARAP3Q8WWN8 1544 aa30.87■■■□□ 2.53
CPNE2-202ENST00000535318 PLXNC1O60486 1568 aa30.85■■■□□ 2.53
CPNE2-202ENST00000535318 PPP4R2Q9NY27 417 aa30.84■■■□□ 2.53
CPNE2-202ENST00000535318 ASXL2Q76L83 1435 aa30.83■■■□□ 2.53
CPNE2-202ENST00000535318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.83■■■□□ 2.53
CPNE2-202ENST00000535318 ABCA9Q8IUA7 1624 aa30.82■■■□□ 2.52
CPNE2-202ENST00000535318 CCDC144AA2RUR9 1427 aa30.81■■■□□ 2.52
CPNE2-202ENST00000535318 TRAPPC8Q9Y2L5 1435 aa30.8■■■□□ 2.52
CPNE2-202ENST00000535318 RGL3Q3MIN7 710 aa30.79■■■□□ 2.52
CPNE2-202ENST00000535318 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
CPNE2-202ENST00000535318 PNISRQ8TF01 805 aaKnown RBP30.78■■■□□ 2.52
CPNE2-202ENST00000535318 ANP32EQ9BTT0 268 aa30.77■■■□□ 2.52
CPNE2-202ENST00000535318 UNC13BO14795 1591 aa30.77■■■□□ 2.52
CPNE2-202ENST00000535318 PRAG1Q86YV5 1406 aa30.76■■■□□ 2.52
CPNE2-202ENST00000535318 TMC1Q8TDI8 760 aa30.75■■■□□ 2.51
CPNE2-202ENST00000535318 SENP3-EIF4A1A0A087X0R7 540 aa30.75■■■□□ 2.51
CPNE2-202ENST00000535318 SMG6Q86US8 1419 aaKnown RBP30.74■■■□□ 2.51
CPNE2-202ENST00000535318 NBPF1Q3BBV0 1214 aa30.73■■■□□ 2.51
CPNE2-202ENST00000535318 DUOX2Q9NRD8 1548 aa30.73■■■□□ 2.51
CPNE2-202ENST00000535318 FANCAO15360 1455 aa30.72■■■□□ 2.51
CPNE2-202ENST00000535318 TRPM1Q7Z4N2 1603 aa30.72■■■□□ 2.51
CPNE2-202ENST00000535318 B4GALNT3Q6L9W6 998 aa30.7■■■□□ 2.51
CPNE2-202ENST00000535318 NPM1P06748 294 aaKnown RBP eCLIP30.69■■■□□ 2.5
CPNE2-202ENST00000535318 A2MP01023 1474 aa30.68■■■□□ 2.5
CPNE2-202ENST00000535318 NUDCQ9Y266 331 aa30.68■■■□□ 2.5
CPNE2-202ENST00000535318 E9PCH4 1651 aa30.67■■■□□ 2.5
CPNE2-202ENST00000535318 AFAP1Q8N556 730 aa30.67■■■□□ 2.5
CPNE2-202ENST00000535318 ERBINQ96RT1 1412 aa30.67■■■□□ 2.5
CPNE2-202ENST00000535318 IQGAP3Q86VI3 1631 aa30.67■■■□□ 2.5
CPNE2-202ENST00000535318 MYBBP1AQ9BQG0 1328 aaKnown RBP30.65■■■□□ 2.5
CPNE2-202ENST00000535318 RALBP1Q15311 655 aa30.64■■■□□ 2.5
CPNE2-202ENST00000535318 SPAG9O60271 1321 aaKnown RBP30.64■■■□□ 2.5
CPNE2-202ENST00000535318 ZFYVE16Q7Z3T8 1539 aa30.64■■■□□ 2.5
CPNE2-202ENST00000535318 RTEL1-TNFRSF6BF6WH68 1400 aa30.64■■■□□ 2.5
CPNE2-202ENST00000535318 BRD4O60885 1362 aaPredicted RBP30.62■■■□□ 2.49
CPNE2-202ENST00000535318 GPRASP1Q5JY77 1395 aa30.62■■■□□ 2.49
CPNE2-202ENST00000535318 KTN1Q86UP2 1357 aaKnown RBP30.61■■■□□ 2.49
CPNE2-202ENST00000535318 MAGI2Q86UL8 1455 aa30.61■■■□□ 2.49
CPNE2-202ENST00000535318 LRPPRCP42704 1394 aaKnown RBP30.61■■■□□ 2.49
CPNE2-202ENST00000535318 ADGRL1O94910 1474 aa30.6■■■□□ 2.49
CPNE2-202ENST00000535318 SCAPERQ9BY12 1400 aa30.57■■■□□ 2.48
CPNE2-202ENST00000535318 RNF123Q5XPI4 1314 aa30.56■■■□□ 2.48
CPNE2-202ENST00000535318 INO80Q9ULG1 1556 aaPredicted RBP30.55■■■□□ 2.48
CPNE2-202ENST00000535318 ATP10AO60312 1499 aa30.54■■■□□ 2.48
CPNE2-202ENST00000535318 TESK2Q96S53 571 aa30.54■■■□□ 2.48
CPNE2-202ENST00000535318 ATP7AQ04656 1500 aa30.54■■■□□ 2.48
CPNE2-202ENST00000535318 PER1O15534 1290 aaPredicted RBP30.53■■■□□ 2.48
CPNE2-202ENST00000535318 PRDM15P57071 1507 aaPredicted RBP30.53■■■□□ 2.48
CPNE2-202ENST00000535318 MSH5O43196 834 aa30.53■■■□□ 2.48
CPNE2-202ENST00000535318 DISP3Q9P2K9 1392 aa30.53■■■□□ 2.48
CPNE2-202ENST00000535318 PARD3Q8TEW0 1356 aa30.52■■■□□ 2.48
CPNE2-202ENST00000535318 COL17A1Q9UMD9 1497 aaPredicted RBP30.51■■■□□ 2.47
CPNE2-202ENST00000535318 LAMC1P11047 1609 aa30.51■■■□□ 2.47
CPNE2-202ENST00000535318 NLRP13Q86W25 1043 aa30.49■■■□□ 2.47
CPNE2-202ENST00000535318 FANCIQ9NVI1 1328 aa30.49■■■□□ 2.47
CPNE2-202ENST00000535318 CD109Q6YHK3 1445 aa30.49■■■□□ 2.47
CPNE2-202ENST00000535318 EIF2AK4Q9P2K8 1649 aaKnown RBP30.46■■■□□ 2.47
CPNE2-202ENST00000535318 CC2D1BQ5T0F9 858 aaKnown RBP30.42■■■□□ 2.46
CPNE2-202ENST00000535318 PANK3Q9H999 370 aa30.42■■■□□ 2.46
CPNE2-202ENST00000535318 DEPDC5O75140 1603 aa30.41■■■□□ 2.46
CPNE2-202ENST00000535318 CFAP74Q9C0B2 1584 aa30.41■■■□□ 2.46
CPNE2-202ENST00000535318 SALL2Q9Y467 1007 aaPredicted RBP30.4■■■□□ 2.46
CPNE2-202ENST00000535318 ZNF518AQ6AHZ1 1483 aa30.39■■■□□ 2.46
CPNE2-202ENST00000535318 TMF1P82094 1093 aa30.39■■■□□ 2.46
CPNE2-202ENST00000535318 MYT1LQ9UL68 1186 aa30.39■■■□□ 2.45
CPNE2-202ENST00000535318 KIDINS220Q9ULH0 1771 aa30.38■■■□□ 2.45
CPNE2-202ENST00000535318 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
CPNE2-202ENST00000535318 CCDC136Q96JN2 1154 aa30.37■■■□□ 2.45
CPNE2-202ENST00000535318 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
CPNE2-202ENST00000535318 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
CPNE2-202ENST00000535318 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
CPNE2-202ENST00000535318 WASHC2CQ9Y4E1 1318 aa30.36■■■□□ 2.45
CPNE2-202ENST00000535318 RNF17Q9BXT8 1623 aaKnown RBP30.35■■■□□ 2.45
CPNE2-202ENST00000535318 POGZQ7Z3K3 1410 aa30.33■■■□□ 2.45
CPNE2-202ENST00000535318 KIF3BO15066 747 aa30.3■■■□□ 2.44
CPNE2-202ENST00000535318 VWDEQ8N2E2 1590 aa30.3■■■□□ 2.44
CPNE2-202ENST00000535318 MADDQ8WXG6 1647 aa30.3■■■□□ 2.44
CPNE2-202ENST00000535318 TRPM2O94759 1503 aa30.28■■■□□ 2.44
CPNE2-202ENST00000535318 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
CPNE2-202ENST00000535318 RRP1P56182 461 aaKnown RBP30.27■■■□□ 2.44
CPNE2-202ENST00000535318 TET3O43151 1660 aa30.26■■■□□ 2.44
CPNE2-202ENST00000535318 NEO1Q92859 1461 aa30.26■■■□□ 2.43
CPNE2-202ENST00000535318 PTPRTO14522 1441 aa30.26■■■□□ 2.43
CPNE2-202ENST00000535318 RCAN3Q9UKA8 241 aa30.25■■■□□ 2.43
CPNE2-202ENST00000535318 KANK1Q14678 1352 aa30.25■■■□□ 2.43
CPNE2-202ENST00000535318 MLH3Q9UHC1 1453 aa30.24■■■□□ 2.43
CPNE2-202ENST00000535318 PDE3BQ13370 1112 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms