RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 POGZQ7Z3K3 1410 aa18.89■□□□□ 0.61
BEST1-208ENST00000534553 GLI2P10070 1586 aa18.89■□□□□ 0.61
BEST1-208ENST00000534553 KANK1Q14678 1352 aa18.88■□□□□ 0.61
BEST1-208ENST00000534553 MLH3Q9UHC1 1453 aa18.87■□□□□ 0.61
BEST1-208ENST00000534553 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
BEST1-208ENST00000534553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
BEST1-208ENST00000534553 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
BEST1-208ENST00000534553 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
BEST1-208ENST00000534553 HSPA5P11021 654 aaKnown RBP18.84■□□□□ 0.61
BEST1-208ENST00000534553 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
BEST1-208ENST00000534553 VWDEQ8N2E2 1590 aa18.84■□□□□ 0.61
BEST1-208ENST00000534553 MAP3K4Q9Y6R4 1608 aa18.83■□□□□ 0.61
BEST1-208ENST00000534553 RALGAPBQ86X10 1494 aa18.83■□□□□ 0.6
BEST1-208ENST00000534553 HECW2Q9P2P5 1572 aa18.83■□□□□ 0.6
BEST1-208ENST00000534553 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
BEST1-208ENST00000534553 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
BEST1-208ENST00000534553 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
BEST1-208ENST00000534553 TET3O43151 1660 aa18.82■□□□□ 0.6
BEST1-208ENST00000534553 SPATA31E1Q6ZUB1 1445 aa18.81■□□□□ 0.6
BEST1-208ENST00000534553 A2MP01023 1474 aa18.8■□□□□ 0.6
BEST1-208ENST00000534553 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
BEST1-208ENST00000534553 TRPM2O94759 1503 aa18.78■□□□□ 0.6
BEST1-208ENST00000534553 PTPRTO14522 1441 aa18.78■□□□□ 0.6
BEST1-208ENST00000534553 RNF17Q9BXT8 1623 aaKnown RBP18.77■□□□□ 0.6
BEST1-208ENST00000534553 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
BEST1-208ENST00000534553 LMTK2Q8IWU2 1503 aa18.77■□□□□ 0.59
BEST1-208ENST00000534553 KIF3BO15066 747 aa18.77■□□□□ 0.59
BEST1-208ENST00000534553 STAC3Q96MF2 364 aa18.77■□□□□ 0.59
BEST1-208ENST00000534553 E9PCH4 1651 aa18.76■□□□□ 0.59
BEST1-208ENST00000534553 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
BEST1-208ENST00000534553 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
BEST1-208ENST00000534553 ANP32CO43423 234 aa18.74■□□□□ 0.59
BEST1-208ENST00000534553 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
BEST1-208ENST00000534553 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
BEST1-208ENST00000534553 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
BEST1-208ENST00000534553 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
BEST1-208ENST00000534553 SPHKAPQ2M3C7 1700 aa18.73■□□□□ 0.59
BEST1-208ENST00000534553 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
BEST1-208ENST00000534553 USP47Q96K76 1375 aa18.73■□□□□ 0.59
BEST1-208ENST00000534553 PRAG1Q86YV5 1406 aa18.73■□□□□ 0.59
BEST1-208ENST00000534553 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
BEST1-208ENST00000534553 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
BEST1-208ENST00000534553 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
BEST1-208ENST00000534553 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
BEST1-208ENST00000534553 RICTORQ6R327 1708 aa18.7■□□□□ 0.58
BEST1-208ENST00000534553 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
BEST1-208ENST00000534553 ABCA6Q8N139 1617 aa18.69■□□□□ 0.58
BEST1-208ENST00000534553 LAMC1P11047 1609 aa18.69■□□□□ 0.58
BEST1-208ENST00000534553 CEP152O94986 1710 aa18.68■□□□□ 0.58
BEST1-208ENST00000534553 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
BEST1-208ENST00000534553 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
BEST1-208ENST00000534553 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
BEST1-208ENST00000534553 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
BEST1-208ENST00000534553 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
BEST1-208ENST00000534553 ZMYM4Q5VZL5 1548 aa18.67■□□□□ 0.58
BEST1-208ENST00000534553 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
BEST1-208ENST00000534553 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
BEST1-208ENST00000534553 KDM2AQ9Y2K7 1162 aa18.66■□□□□ 0.58
BEST1-208ENST00000534553 YTHDC1Q96MU7 727 aaKnown RBP18.65■□□□□ 0.58
BEST1-208ENST00000534553 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
BEST1-208ENST00000534553 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
BEST1-208ENST00000534553 PPRC1Q5VV67 1664 aaKnown RBP18.63■□□□□ 0.57
BEST1-208ENST00000534553 RAPGEF3O95398 923 aa18.63■□□□□ 0.57
BEST1-208ENST00000534553 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
BEST1-208ENST00000534553 ZC3H13Q5T200 1668 aaKnown RBP18.61■□□□□ 0.57
BEST1-208ENST00000534553 ABCC3O15438 1527 aa18.59■□□□□ 0.57
BEST1-208ENST00000534553 C11orf95C9JLR9 678 aaPredicted RBP18.58■□□□□ 0.56
BEST1-208ENST00000534553 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
BEST1-208ENST00000534553 MADDQ8WXG6 1647 aa18.57■□□□□ 0.56
BEST1-208ENST00000534553 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
BEST1-208ENST00000534553 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
BEST1-208ENST00000534553 MYOM2P54296 1465 aa18.56■□□□□ 0.56
BEST1-208ENST00000534553 NPATQ14207 1427 aa18.55■□□□□ 0.56
BEST1-208ENST00000534553 GGT6Q6P531 493 aa18.55■□□□□ 0.56
BEST1-208ENST00000534553 KIF1BO60333 1816 aa18.55■□□□□ 0.56
BEST1-208ENST00000534553 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
BEST1-208ENST00000534553 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
BEST1-208ENST00000534553 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
BEST1-208ENST00000534553 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
BEST1-208ENST00000534553 ADGRB3O60242 1522 aa18.52■□□□□ 0.55
BEST1-208ENST00000534553 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
BEST1-208ENST00000534553 AGLP35573 1532 aa18.51■□□□□ 0.55
BEST1-208ENST00000534553 NOS1P29475 1434 aa18.5■□□□□ 0.55
BEST1-208ENST00000534553 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
BEST1-208ENST00000534553 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
BEST1-208ENST00000534553 KIF13AQ9H1H9 1805 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 NRXN1Q9ULB1 1477 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
BEST1-208ENST00000534553 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
BEST1-208ENST00000534553 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
BEST1-208ENST00000534553 COL17A1Q9UMD9 1497 aaPredicted RBP18.46■□□□□ 0.55
BEST1-208ENST00000534553 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
BEST1-208ENST00000534553 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
BEST1-208ENST00000534553 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
BEST1-208ENST00000534553 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
BEST1-208ENST00000534553 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
BEST1-208ENST00000534553 TMF1P82094 1093 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 684.2 ms