RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 UHRF1BP1Q6BDS2 1440 aa23.29■■□□□ 1.32
SIPA1-209ENST00000534313 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
SIPA1-209ENST00000534313 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
SIPA1-209ENST00000534313 MYBBP1AQ9BQG0 1328 aaKnown RBP23.23■■□□□ 1.31
SIPA1-209ENST00000534313 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
SIPA1-209ENST00000534313 CCDC144AA2RUR9 1427 aa23.21■■□□□ 1.31
SIPA1-209ENST00000534313 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
SIPA1-209ENST00000534313 CCDC141Q6ZP82 1450 aa23.19■■□□□ 1.3
SIPA1-209ENST00000534313 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
SIPA1-209ENST00000534313 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
SIPA1-209ENST00000534313 RALBP1Q15311 655 aa23.18■■□□□ 1.3
SIPA1-209ENST00000534313 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
SIPA1-209ENST00000534313 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
SIPA1-209ENST00000534313 SYCP2Q9BX26 1530 aa23.15■■□□□ 1.3
SIPA1-209ENST00000534313 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
SIPA1-209ENST00000534313 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
SIPA1-209ENST00000534313 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
SIPA1-209ENST00000534313 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
SIPA1-209ENST00000534313 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
SIPA1-209ENST00000534313 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
SIPA1-209ENST00000534313 LRPPRCP42704 1394 aaKnown RBP23.13■■□□□ 1.29
SIPA1-209ENST00000534313 EXOC6Q8TAG9 804 aa23.12■■□□□ 1.29
SIPA1-209ENST00000534313 KTN1Q86UP2 1357 aaKnown RBP23.12■■□□□ 1.29
SIPA1-209ENST00000534313 NLRP13Q86W25 1043 aa23.11■■□□□ 1.29
SIPA1-209ENST00000534313 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
SIPA1-209ENST00000534313 PLEKHH2Q8IVE3 1493 aa23.11■■□□□ 1.29
SIPA1-209ENST00000534313 PANK3Q9H999 370 aa23.11■■□□□ 1.29
SIPA1-209ENST00000534313 DISP3Q9P2K9 1392 aa23.11■■□□□ 1.29
SIPA1-209ENST00000534313 CDC42BPBQ9Y5S2 1711 aa23.1■■□□□ 1.29
SIPA1-209ENST00000534313 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
SIPA1-209ENST00000534313 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
SIPA1-209ENST00000534313 PER1O15534 1290 aaPredicted RBP23.09■■□□□ 1.29
SIPA1-209ENST00000534313 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
SIPA1-209ENST00000534313 RCAN3Q9UKA8 241 aa23.08■■□□□ 1.29
SIPA1-209ENST00000534313 RRP1P56182 461 aaKnown RBP23.08■■□□□ 1.29
SIPA1-209ENST00000534313 A2MP01023 1474 aa23.07■■□□□ 1.28
SIPA1-209ENST00000534313 TESK2Q96S53 571 aa23.06■■□□□ 1.28
SIPA1-209ENST00000534313 PLIN1O60240 522 aa23.06■■□□□ 1.28
SIPA1-209ENST00000534313 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
SIPA1-209ENST00000534313 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
SIPA1-209ENST00000534313 PREX2Q70Z35 1606 aa23.04■■□□□ 1.28
SIPA1-209ENST00000534313 PARD3Q8TEW0 1356 aa23.04■■□□□ 1.28
SIPA1-209ENST00000534313 NOP58Q9Y2X3 529 aaKnown RBP23.03■■□□□ 1.28
SIPA1-209ENST00000534313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
SIPA1-209ENST00000534313 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
SIPA1-209ENST00000534313 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
SIPA1-209ENST00000534313 ANP32AP39687 249 aaKnown RBP23■■□□□ 1.27
SIPA1-209ENST00000534313 TMF1P82094 1093 aa22.99■■□□□ 1.27
SIPA1-209ENST00000534313 SKAP1Q86WV1 359 aa22.98■■□□□ 1.27
SIPA1-209ENST00000534313 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
SIPA1-209ENST00000534313 E9PCH4 1651 aa22.96■■□□□ 1.27
SIPA1-209ENST00000534313 AFAP1Q8N556 730 aa22.95■■□□□ 1.26
SIPA1-209ENST00000534313 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.26
SIPA1-209ENST00000534313 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
SIPA1-209ENST00000534313 GPRASP1Q5JY77 1395 aa22.94■■□□□ 1.26
SIPA1-209ENST00000534313 RTN4Q9NQC3 1192 aaKnown RBP22.93■■□□□ 1.26
SIPA1-209ENST00000534313 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
SIPA1-209ENST00000534313 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
SIPA1-209ENST00000534313 EFCAB2Q5VUJ9 269 aa22.91■■□□□ 1.26
SIPA1-209ENST00000534313 CHD1O14646 1710 aa22.91■■□□□ 1.26
SIPA1-209ENST00000534313 TRAPPC8Q9Y2L5 1435 aa22.9■■□□□ 1.26
SIPA1-209ENST00000534313 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.26
SIPA1-209ENST00000534313 UNC13BO14795 1591 aa22.89■■□□□ 1.25
SIPA1-209ENST00000534313 PDE3BQ13370 1112 aa22.89■■□□□ 1.25
SIPA1-209ENST00000534313 CRBNQ96SW2 442 aa22.88■■□□□ 1.25
SIPA1-209ENST00000534313 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
SIPA1-209ENST00000534313 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
SIPA1-209ENST00000534313 C20orf194Q5TEA3 1177 aa22.86■■□□□ 1.25
SIPA1-209ENST00000534313 SPAG9O60271 1321 aaKnown RBP22.85■■□□□ 1.25
SIPA1-209ENST00000534313 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
SIPA1-209ENST00000534313 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
SIPA1-209ENST00000534313 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
SIPA1-209ENST00000534313 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.25
SIPA1-209ENST00000534313 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
SIPA1-209ENST00000534313 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
SIPA1-209ENST00000534313 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
SIPA1-209ENST00000534313 PLCH2O75038 1416 aa22.82■■□□□ 1.24
SIPA1-209ENST00000534313 MAGI2Q86UL8 1455 aa22.82■■□□□ 1.24
SIPA1-209ENST00000534313 PDE4AP27815 886 aa22.82■■□□□ 1.24
SIPA1-209ENST00000534313 WASHC2CQ9Y4E1 1318 aa22.81■■□□□ 1.24
SIPA1-209ENST00000534313 CCDC146Q8IYE0 955 aa22.81■■□□□ 1.24
SIPA1-209ENST00000534313 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
SIPA1-209ENST00000534313 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
SIPA1-209ENST00000534313 TCERG1O14776 1098 aaKnown RBP22.78■■□□□ 1.24
SIPA1-209ENST00000534313 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
SIPA1-209ENST00000534313 KIF3BO15066 747 aa22.77■■□□□ 1.24
SIPA1-209ENST00000534313 AMER1Q5JTC6 1135 aaPredicted RBP22.77■■□□□ 1.23
SIPA1-209ENST00000534313 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
SIPA1-209ENST00000534313 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
SIPA1-209ENST00000534313 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
SIPA1-209ENST00000534313 CFAP70Q5T0N1 1121 aa22.74■■□□□ 1.23
SIPA1-209ENST00000534313 ATP10AO60312 1499 aa22.73■■□□□ 1.23
SIPA1-209ENST00000534313 BACH2Q9BYV9 841 aa22.72■■□□□ 1.23
SIPA1-209ENST00000534313 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
SIPA1-209ENST00000534313 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
SIPA1-209ENST00000534313 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
SIPA1-209ENST00000534313 ABCC1P33527 1531 aa22.7■■□□□ 1.22
SIPA1-209ENST00000534313 LAMC1P11047 1609 aa22.7■■□□□ 1.22
SIPA1-209ENST00000534313 ANO8Q9HCE9 1232 aaPredicted RBP22.7■■□□□ 1.22
SIPA1-209ENST00000534313 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms