RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 UBE2Q2Q8WVN8 375 aa5.1□□□□□ -1.59
SOX6-217ENST00000533870 RTN4Q9NQC3 1192 aaKnown RBP5.09□□□□□ -1.59
SOX6-217ENST00000533870 NFKBIBQ15653 356 aa5.09□□□□□ -1.59
SOX6-217ENST00000533870 CENPJQ9HC77 1338 aaPredicted RBP5.09□□□□□ -1.59
SOX6-217ENST00000533870 RUSC2Q8N2Y8 1516 aa5.09□□□□□ -1.59
SOX6-217ENST00000533870 NUP155O75694 1391 aa5.09□□□□□ -1.59
SOX6-217ENST00000533870 NAIPQ13075 1403 aa5.09□□□□□ -1.59
SOX6-217ENST00000533870 HTATSF1O43719 755 aaKnown RBP5.09□□□□□ -1.59
SOX6-217ENST00000533870 NUCB2P80303 420 aa5.09□□□□□ -1.59
SOX6-217ENST00000533870 MBD3O95983 291 aa5.09□□□□□ -1.6
SOX6-217ENST00000533870 ZNF777Q9ULD5 760 aaPredicted RBP5.09□□□□□ -1.6
SOX6-217ENST00000533870 GOLGA6L6A8MZA4 724 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 PHF14O94880 888 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 ATP6V1DQ9Y5K8 247 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 HS1BP3Q53T59 392 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 FHOD3Q2V2M9 1422 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 MCCP23508 829 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 KANK1Q14678 1352 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 LMOD3Q0VAK6 560 aa5.08□□□□□ -1.6
SOX6-217ENST00000533870 FTSJ3Q8IY81 847 aaKnown RBP5.08□□□□□ -1.6
SOX6-217ENST00000533870 NCOA2Q15596 1464 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 FAM184AQ8NB25 1140 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 TIAM1Q13009 1591 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 RGS3P49796 1198 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 KIAA1107Q9UPP5 1409 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 CREBRFQ8IUR6 639 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 PDCL2Q8N4E4 241 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 DDX19BQ9UMR2 479 aa5.07□□□□□ -1.6
SOX6-217ENST00000533870 PTMAP06454 111 aaKnown RBP5.07□□□□□ -1.6
SOX6-217ENST00000533870 CAVIN1Q6NZI2 390 aaKnown RBP5.07□□□□□ -1.6
SOX6-217ENST00000533870 PRKCSHP14314 528 aaPredicted RBP5.06□□□□□ -1.6
SOX6-217ENST00000533870 CLCN1P35523 988 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 EHBP1L1Q8N3D4 1523 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 MCM2P49736 904 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 EFCAB2Q5VUJ9 269 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 ANKRD30BQ9BXX2 1392 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 NPC1L1Q9UHC9 1359 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 HMMRO75330 724 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 ZKSCAN2Q63HK3 967 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 TOP2BQ02880 1626 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 EXOC6Q8TAG9 804 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 PUS7Q96PZ0 661 aaKnown RBP5.06□□□□□ -1.6
SOX6-217ENST00000533870 ANKRD50Q9ULJ7 1429 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 TAF3Q5VWG9 929 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 CLUAP1Q96AJ1 413 aa5.06□□□□□ -1.6
SOX6-217ENST00000533870 HSP90AB1P08238 724 aaKnown RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 HIRIP3Q9BW71 556 aaPredicted RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 NUP160Q12769 1436 aa5.05□□□□□ -1.6
SOX6-217ENST00000533870 CCDC173Q0VFZ6 552 aa5.05□□□□□ -1.6
SOX6-217ENST00000533870 DCAF11Q8TEB1 546 aa5.05□□□□□ -1.6
SOX6-217ENST00000533870 RPRD2Q5VT52 1461 aaKnown RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 API5Q9BZZ5 524 aaKnown RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 SLKQ9H2G2 1235 aaPredicted RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 THOC2Q8NI27 1593 aaKnown RBP5.05□□□□□ -1.6
SOX6-217ENST00000533870 REC8O95072 547 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 ST18O60284 1047 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 NPM3O75607 178 aaKnown RBP5.04□□□□□ -1.6
SOX6-217ENST00000533870 CHMP7Q8WUX9 453 aaPredicted RBP5.04□□□□□ -1.6
SOX6-217ENST00000533870 ESPNB1AK53 854 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 FAM193AP78312 1265 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 ST20-MTHFSA0A0A6YYL1 179 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 ABCC11Q96J66 1382 aa5.04□□□□□ -1.6
SOX6-217ENST00000533870 MSH5O43196 834 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 ZSCAN30Q86W11 494 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 DIAPH3Q9NSV4 1193 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 KIF3AQ9Y496 699 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
SOX6-217ENST00000533870 RABEP1Q15276 862 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 CWC22Q9HCG8 908 aaKnown RBP5.03□□□□□ -1.6
SOX6-217ENST00000533870 TROQ12816 1431 aaPredicted RBP5.03□□□□□ -1.6
SOX6-217ENST00000533870 ABCA10Q8WWZ4 1543 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 TSPYL1Q9H0U9 437 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 PDCL3Q9H2J4 239 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 LRPPRCP42704 1394 aaKnown RBP5.03□□□□□ -1.6
SOX6-217ENST00000533870 WDR63Q8IWG1 891 aa5.03□□□□□ -1.6
SOX6-217ENST00000533870 EIF4G1Q04637 1599 aaKnown RBP5.03□□□□□ -1.6
SOX6-217ENST00000533870 MORC1Q86VD1 984 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 WIZO95785 1651 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 TUBB4AP04350 444 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 LETM1O95202 739 aaPredicted RBP5.02□□□□□ -1.61
SOX6-217ENST00000533870 MCM4P33991 863 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 CCDC39Q9UFE4 941 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 CNGB1Q14028 1251 aaPredicted RBP5.02□□□□□ -1.61
SOX6-217ENST00000533870 KDM2AQ9Y2K7 1162 aa5.02□□□□□ -1.61
SOX6-217ENST00000533870 CAVIN2O95810 425 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 GCC1Q96CN9 775 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 KCNH8Q96L42 1107 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 TERF2IPQ9NYB0 399 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 POLA1P09884 1462 aaPredicted RBP5.01□□□□□ -1.61
SOX6-217ENST00000533870 ARHGEF12Q9NZN5 1544 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 ATAD2Q6PL18 1390 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 CCDC66A2RUB6 948 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 EPB41L2O43491 1005 aaKnown RBP5.01□□□□□ -1.61
SOX6-217ENST00000533870 CCDC34Q96HJ3 373 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 CAMSAP2Q08AD1 1489 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 TCOF1Q13428 1488 aaKnown RBP5.01□□□□□ -1.61
SOX6-217ENST00000533870 KIF2AO00139 706 aaPredicted RBP5.01□□□□□ -1.61
SOX6-217ENST00000533870 GPRASP1Q5JY77 1395 aa5.01□□□□□ -1.61
SOX6-217ENST00000533870 ZRSR1Q15695 479 aaKnown RBP5□□□□□ -1.61
SOX6-217ENST00000533870 DZIP1LQ8IYY4 767 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms