RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ERBINQ96RT1 1412 aa17.93■□□□□ 0.46
TGFBR3-211ENST00000533370 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
TGFBR3-211ENST00000533370 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
TGFBR3-211ENST00000533370 KDM5CP41229 1560 aa17.92■□□□□ 0.46
TGFBR3-211ENST00000533370 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
TGFBR3-211ENST00000533370 NUP155O75694 1391 aa17.91■□□□□ 0.46
TGFBR3-211ENST00000533370 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
TGFBR3-211ENST00000533370 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
TGFBR3-211ENST00000533370 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
TGFBR3-211ENST00000533370 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
TGFBR3-211ENST00000533370 PZPP20742 1482 aa17.86■□□□□ 0.45
TGFBR3-211ENST00000533370 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
TGFBR3-211ENST00000533370 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
TGFBR3-211ENST00000533370 A2MP01023 1474 aa17.85■□□□□ 0.45
TGFBR3-211ENST00000533370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
TGFBR3-211ENST00000533370 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
TGFBR3-211ENST00000533370 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
TGFBR3-211ENST00000533370 KIF3BO15066 747 aa17.84■□□□□ 0.45
TGFBR3-211ENST00000533370 PKD2Q13563 968 aa17.84■□□□□ 0.45
TGFBR3-211ENST00000533370 RICTORQ6R327 1708 aa17.84■□□□□ 0.45
TGFBR3-211ENST00000533370 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
TGFBR3-211ENST00000533370 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
TGFBR3-211ENST00000533370 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
TGFBR3-211ENST00000533370 KANK1Q14678 1352 aa17.8■□□□□ 0.44
TGFBR3-211ENST00000533370 ANKRD30BQ9BXX2 1392 aa17.8■□□□□ 0.44
TGFBR3-211ENST00000533370 FRMPD1Q5SYB0 1578 aa17.8■□□□□ 0.44
TGFBR3-211ENST00000533370 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
TGFBR3-211ENST00000533370 UNC13BO14795 1591 aa17.79■□□□□ 0.44
TGFBR3-211ENST00000533370 ATP10AO60312 1499 aa17.78■□□□□ 0.44
TGFBR3-211ENST00000533370 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
TGFBR3-211ENST00000533370 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
TGFBR3-211ENST00000533370 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
TGFBR3-211ENST00000533370 ABCA6Q8N139 1617 aa17.76■□□□□ 0.43
TGFBR3-211ENST00000533370 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
TGFBR3-211ENST00000533370 IQGAP3Q86VI3 1631 aa17.73■□□□□ 0.43
TGFBR3-211ENST00000533370 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
TGFBR3-211ENST00000533370 GGT6Q6P531 493 aa17.72■□□□□ 0.43
TGFBR3-211ENST00000533370 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
TGFBR3-211ENST00000533370 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
TGFBR3-211ENST00000533370 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
TGFBR3-211ENST00000533370 REREQ9P2R6 1566 aa17.69■□□□□ 0.42
TGFBR3-211ENST00000533370 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
TGFBR3-211ENST00000533370 PPP1R15AO75807 674 aaPredicted RBP17.68■□□□□ 0.42
TGFBR3-211ENST00000533370 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
TGFBR3-211ENST00000533370 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
TGFBR3-211ENST00000533370 RPRD2Q5VT52 1461 aaKnown RBP17.67■□□□□ 0.42
TGFBR3-211ENST00000533370 AGLP35573 1532 aa17.67■□□□□ 0.42
TGFBR3-211ENST00000533370 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
TGFBR3-211ENST00000533370 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
TGFBR3-211ENST00000533370 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
TGFBR3-211ENST00000533370 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
TGFBR3-211ENST00000533370 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
TGFBR3-211ENST00000533370 PTPRTO14522 1441 aa17.62■□□□□ 0.41
TGFBR3-211ENST00000533370 TET3O43151 1660 aa17.61■□□□□ 0.41
TGFBR3-211ENST00000533370 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
TGFBR3-211ENST00000533370 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
TGFBR3-211ENST00000533370 ABCC3O15438 1527 aa17.58■□□□□ 0.41
TGFBR3-211ENST00000533370 ARID4BQ4LE39 1312 aaPredicted RBP17.57■□□□□ 0.4
TGFBR3-211ENST00000533370 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
TGFBR3-211ENST00000533370 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
TGFBR3-211ENST00000533370 E9PCH4 1651 aa17.56■□□□□ 0.4
TGFBR3-211ENST00000533370 MLECQ14165 292 aa17.54■□□□□ 0.4
TGFBR3-211ENST00000533370 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
TGFBR3-211ENST00000533370 NPATQ14207 1427 aa17.54■□□□□ 0.4
TGFBR3-211ENST00000533370 TRPM2O94759 1503 aa17.52■□□□□ 0.4
TGFBR3-211ENST00000533370 ZC3H13Q5T200 1668 aaKnown RBP17.51■□□□□ 0.39
TGFBR3-211ENST00000533370 CEP152O94986 1710 aa17.5■□□□□ 0.39
TGFBR3-211ENST00000533370 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
TGFBR3-211ENST00000533370 STAC3Q96MF2 364 aa17.5■□□□□ 0.39
TGFBR3-211ENST00000533370 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
TGFBR3-211ENST00000533370 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
TGFBR3-211ENST00000533370 NOS1P29475 1434 aa17.48■□□□□ 0.39
TGFBR3-211ENST00000533370 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
TGFBR3-211ENST00000533370 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
TGFBR3-211ENST00000533370 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
TGFBR3-211ENST00000533370 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
TGFBR3-211ENST00000533370 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
TGFBR3-211ENST00000533370 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
TGFBR3-211ENST00000533370 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
TGFBR3-211ENST00000533370 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
TGFBR3-211ENST00000533370 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
TGFBR3-211ENST00000533370 UHRF1BP1Q6BDS2 1440 aa17.44■□□□□ 0.38
TGFBR3-211ENST00000533370 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
TGFBR3-211ENST00000533370 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
TGFBR3-211ENST00000533370 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
TGFBR3-211ENST00000533370 IDI1Q13907 227 aa17.41■□□□□ 0.38
TGFBR3-211ENST00000533370 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
TGFBR3-211ENST00000533370 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
TGFBR3-211ENST00000533370 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
TGFBR3-211ENST00000533370 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
TGFBR3-211ENST00000533370 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
TGFBR3-211ENST00000533370 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
TGFBR3-211ENST00000533370 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
TGFBR3-211ENST00000533370 SYNMO15061 1565 aa17.36■□□□□ 0.37
TGFBR3-211ENST00000533370 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
TGFBR3-211ENST00000533370 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
TGFBR3-211ENST00000533370 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
TGFBR3-211ENST00000533370 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
TGFBR3-211ENST00000533370 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
TGFBR3-211ENST00000533370 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms