RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 HSPA2P54652 639 aa37.68■■■■□ 3.62
USP48-214ENST00000532737 ERBINQ96RT1 1412 aa37.66■■■■□ 3.62
USP48-214ENST00000532737 FBXO41Q8TF61 875 aa37.65■■■■□ 3.62
USP48-214ENST00000532737 PREX1Q8TCU6 1659 aa37.65■■■■□ 3.62
USP48-214ENST00000532737 ESF1Q9H501 851 aaKnown RBP37.62■■■■□ 3.61
USP48-214ENST00000532737 EIF2AK4Q9P2K8 1649 aaKnown RBP37.61■■■■□ 3.61
USP48-214ENST00000532737 PPP6R1Q9UPN7 881 aa37.61■■■■□ 3.61
USP48-214ENST00000532737 ANKRD50Q9ULJ7 1429 aa37.59■■■■□ 3.61
USP48-214ENST00000532737 CNTLNQ9NXG0 1405 aa37.55■■■■□ 3.6
USP48-214ENST00000532737 RNF17Q9BXT8 1623 aaKnown RBP37.54■■■■□ 3.6
USP48-214ENST00000532737 SETD1BQ9UPS6 1966 aaKnown RBP37.53■■■■□ 3.6
USP48-214ENST00000532737 CEBPAP49715 358 aaPredicted RBP37.53■■■■□ 3.6
USP48-214ENST00000532737 MROH1Q8NDA8 1641 aa37.5■■■■□ 3.59
USP48-214ENST00000532737 C3P01024 1663 aa37.5■■■■□ 3.59
USP48-214ENST00000532737 WASHC2CQ9Y4E1 1318 aa37.49■■■■□ 3.59
USP48-214ENST00000532737 ZMYM3Q14202 1370 aa37.48■■■■□ 3.59
USP48-214ENST00000532737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.48■■■■□ 3.591e-8■■□□□ 11.4
USP48-214ENST00000532737 CLTCQ00610 1675 aaKnown RBP37.47■■■■□ 3.59
USP48-214ENST00000532737 NAIPQ13075 1403 aa37.44■■■■□ 3.58
USP48-214ENST00000532737 KDM5DQ9BY66 1539 aa37.44■■■■□ 3.58
USP48-214ENST00000532737 FAM135AQ9P2D6 1515 aa37.43■■■■□ 3.58
USP48-214ENST00000532737 STRCQ7RTU9 1775 aa37.42■■■■□ 3.58
USP48-214ENST00000532737 DEPDC5O75140 1603 aa37.42■■■■□ 3.58
USP48-214ENST00000532737 PRDM15P57071 1507 aaPredicted RBP37.41■■■■□ 3.58
USP48-214ENST00000532737 MROH2AA6NES4 1674 aa37.41■■■■□ 3.58
USP48-214ENST00000532737 HFM1A2PYH4 1435 aa37.4■■■■□ 3.58
USP48-214ENST00000532737 ABCC3O15438 1527 aa37.4■■■■□ 3.58
USP48-214ENST00000532737 KANK1Q14678 1352 aa37.37■■■■□ 3.57
USP48-214ENST00000532737 UHRF1BP1Q6BDS2 1440 aa37.36■■■■□ 3.57
USP48-214ENST00000532737 VWDEQ8N2E2 1590 aa37.32■■■■□ 3.56
USP48-214ENST00000532737 GCC2Q8IWJ2 1684 aa37.31■■■■□ 3.56
USP48-214ENST00000532737 ZC3H13Q5T200 1668 aaKnown RBP37.3■■■■□ 3.56
USP48-214ENST00000532737 UNC13BO14795 1591 aa37.29■■■■□ 3.56
USP48-214ENST00000532737 CEP152O94986 1710 aa37.28■■■■□ 3.56
USP48-214ENST00000532737 FBXO31Q5XUX0 539 aaPredicted RBP37.27■■■■□ 3.56
USP48-214ENST00000532737 PZPP20742 1482 aa37.26■■■■□ 3.55
USP48-214ENST00000532737 CERKQ8TCT0 537 aa37.25■■■■□ 3.55
USP48-214ENST00000532737 NPATQ14207 1427 aa37.25■■■■□ 3.55
USP48-214ENST00000532737 LMTK2Q8IWU2 1503 aa37.25■■■■□ 3.55
USP48-214ENST00000532737 NUP155O75694 1391 aa37.24■■■■□ 3.55
USP48-214ENST00000532737 CAMSAP1Q5T5Y3 1602 aa37.21■■■■□ 3.55
USP48-214ENST00000532737 ARHGAP31Q2M1Z3 1444 aa37.19■■■■□ 3.54
USP48-214ENST00000532737 SETD5Q9C0A6 1442 aa37.16■■■■□ 3.54
USP48-214ENST00000532737 DMRT2Q9Y5R5 561 aa37.15■■■■□ 3.54
USP48-214ENST00000532737 IQGAP3Q86VI3 1631 aa37.13■■■■□ 3.53
USP48-214ENST00000532737 TNRQ92752 1358 aa37.13■■■■□ 3.53
USP48-214ENST00000532737 TRIM52Q96A61 297 aa37.12■■■■□ 3.53
USP48-214ENST00000532737 EFCAB6Q5THR3 1501 aa37.11■■■■□ 3.53
USP48-214ENST00000532737 ERVK-7P63135 1459 aa37.1■■■■□ 3.53
USP48-214ENST00000532737 PTPRTO14522 1441 aa37.1■■■■□ 3.53
USP48-214ENST00000532737 TET3O43151 1660 aa37.08■■■■□ 3.53
USP48-214ENST00000532737 SPATA31D1Q6ZQQ2 1576 aa37.07■■■■□ 3.52
USP48-214ENST00000532737 RAB3GAP2Q9H2M9 1393 aa37.04■■■■□ 3.52
USP48-214ENST00000532737 CFAP65Q6ZU64 1925 aaKnown RBP37.02■■■■□ 3.52
USP48-214ENST00000532737 ZNF142P52746 1687 aaPredicted RBP37.02■■■■□ 3.52
USP48-214ENST00000532737 TRIM26Q12899 539 aaPredicted RBP37.02■■■■□ 3.52
USP48-214ENST00000532737 MYO3AQ8NEV4 1616 aa37.01■■■■□ 3.52
USP48-214ENST00000532737 RPRD2Q5VT52 1461 aaKnown RBP37.01■■■■□ 3.51
USP48-214ENST00000532737 NOS1P29475 1434 aa36.98■■■■□ 3.51
USP48-214ENST00000532737 E9PCH4 1651 aa36.96■■■■□ 3.51
USP48-214ENST00000532737 LTBP4Q8N2S1 1624 aa36.96■■■■□ 3.51
USP48-214ENST00000532737 SLC4A1APQ9BWU0 796 aaKnown RBP36.95■■■■□ 3.51
USP48-214ENST00000532737 NLRP1Q9C000 1473 aa36.94■■■■□ 3.5
USP48-214ENST00000532737 A2ML1A8K2U0 1454 aa36.93■■■■□ 3.5
USP48-214ENST00000532737 CEP170BQ9Y4F5 1589 aaPredicted RBP36.92■■■■□ 3.5
USP48-214ENST00000532737 ACIN1Q9UKV3 1341 aaKnown RBP36.92■■■■□ 3.5
USP48-214ENST00000532737 PKD2Q13563 968 aa36.91■■■■□ 3.5
USP48-214ENST00000532737 HRCP23327 699 aa36.9■■■■□ 3.5
USP48-214ENST00000532737 SYNMO15061 1565 aa36.9■■■■□ 3.5
USP48-214ENST00000532737 MPHOSPH9Q99550 1183 aa36.88■■■■□ 3.49
USP48-214ENST00000532737 IDI1Q13907 227 aa36.86■■■■□ 3.49
USP48-214ENST00000532737 PLA2R1Q13018 1463 aa36.84■■■■□ 3.49
USP48-214ENST00000532737 SLC52A1Q9NWF4 448 aa36.83■■■■□ 3.49
USP48-214ENST00000532737 UGGT1Q9NYU2 1555 aa36.79■■■■□ 3.48
USP48-214ENST00000532737 FOXD1Q16676 465 aa36.79■■■■□ 3.48
USP48-214ENST00000532737 IQSEC2Q5JU85 1478 aa36.79■■■■□ 3.48
USP48-214ENST00000532737 THEMISQ8N1K5 641 aaPredicted RBP36.78■■■■□ 3.48
USP48-214ENST00000532737 NCKAP5LQ9HCH0 1330 aa36.78■■■■□ 3.48
USP48-214ENST00000532737 PIK3C2BO00750 1634 aa36.74■■■■□ 3.47
USP48-214ENST00000532737 STAG3Q9UJ98 1225 aa36.72■■■■□ 3.47
USP48-214ENST00000532737 SPHKAPQ2M3C7 1700 aa36.71■■■■□ 3.47
USP48-214ENST00000532737 UBR1Q8IWV7 1749 aa36.69■■■■□ 3.46
USP48-214ENST00000532737 TRPM2O94759 1503 aa36.67■■■■□ 3.46
USP48-214ENST00000532737 POLR1AO95602 1720 aaPredicted RBP36.66■■■■□ 3.46
USP48-214ENST00000532737 ZNF335Q9H4Z2 1342 aaPredicted RBP36.65■■■■□ 3.46
USP48-214ENST00000532737 ADGRB3O60242 1522 aa36.64■■■■□ 3.46
USP48-214ENST00000532737 CHGAP10645 457 aaKnown RBP36.64■■■■□ 3.46
USP48-214ENST00000532737 ANKLE2Q86XL3 938 aa36.61■■■■□ 3.45
USP48-214ENST00000532737 KDM5AP29375 1690 aaKnown RBP36.6■■■■□ 3.45
USP48-214ENST00000532737 TMEM2Q9UHN6 1383 aa36.59■■■■□ 3.45
USP48-214ENST00000532737 TMEM131LA2VDJ0 1609 aa36.59■■■■□ 3.45
USP48-214ENST00000532737 CLTCL1P53675 1640 aa36.59■■■■□ 3.45
USP48-214ENST00000532737 NEURL4Q96JN8 1562 aa36.58■■■■□ 3.45
USP48-214ENST00000532737 ARHGAP23Q9P227 1491 aa36.58■■■■□ 3.45
USP48-214ENST00000532737 SLIT1O75093 1534 aa36.57■■■■□ 3.44
USP48-214ENST00000532737 PCGF6Q9BYE7 350 aa36.56■■■■□ 3.44
USP48-214ENST00000532737 LTKP29376 864 aa36.54■■■■□ 3.44
USP48-214ENST00000532737 TXNDC2Q86VQ3 553 aa36.53■■■■□ 3.44
USP48-214ENST00000532737 CCDC144AA2RUR9 1427 aa36.5■■■■□ 3.43
USP48-214ENST00000532737 EID1Q9Y6B2 187 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms