RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 SIGLEC1Q9BZZ2 1709 aa26.69■■□□□ 1.86
PPP1CA-208ENST00000532446 AGLP35573 1532 aa26.68■■□□□ 1.86
PPP1CA-208ENST00000532446 KIF3BO15066 747 aa26.68■■□□□ 1.86
PPP1CA-208ENST00000532446 RNF17Q9BXT8 1623 aaKnown RBP26.67■■□□□ 1.86
PPP1CA-208ENST00000532446 MROH1Q8NDA8 1641 aa26.63■■□□□ 1.85
PPP1CA-208ENST00000532446 TRIM52Q96A61 297 aa26.63■■□□□ 1.85
PPP1CA-208ENST00000532446 KDM5DQ9BY66 1539 aa26.63■■□□□ 1.85
PPP1CA-208ENST00000532446 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
PPP1CA-208ENST00000532446 NUP155O75694 1391 aa26.6■■□□□ 1.85
PPP1CA-208ENST00000532446 IQGAP3Q86VI3 1631 aa26.59■■□□□ 1.85
PPP1CA-208ENST00000532446 PZPP20742 1482 aa26.59■■□□□ 1.85
PPP1CA-208ENST00000532446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.58■■□□□ 1.85
PPP1CA-208ENST00000532446 VWDEQ8N2E2 1590 aa26.58■■□□□ 1.85
PPP1CA-208ENST00000532446 DHX57Q6P158 1386 aaKnown RBP26.57■■□□□ 1.84
PPP1CA-208ENST00000532446 GGT6Q6P531 493 aa26.55■■□□□ 1.84
PPP1CA-208ENST00000532446 FAM135AQ9P2D6 1515 aa26.54■■□□□ 1.84
PPP1CA-208ENST00000532446 KANK1Q14678 1352 aa26.53■■□□□ 1.84
PPP1CA-208ENST00000532446 MPHOSPH9Q99550 1183 aa26.53■■□□□ 1.84
PPP1CA-208ENST00000532446 ARID4BQ4LE39 1312 aaPredicted RBP26.51■■□□□ 1.83
PPP1CA-208ENST00000532446 SLC4A1APQ9BWU0 796 aaKnown RBP26.5■■□□□ 1.83
PPP1CA-208ENST00000532446 CEP152O94986 1710 aa26.5■■□□□ 1.83
PPP1CA-208ENST00000532446 LMTK2Q8IWU2 1503 aa26.48■■□□□ 1.83
PPP1CA-208ENST00000532446 PPP6R1Q9UPN7 881 aa26.48■■□□□ 1.83
PPP1CA-208ENST00000532446 TET3O43151 1660 aa26.47■■□□□ 1.83
PPP1CA-208ENST00000532446 ZC3H13Q5T200 1668 aaKnown RBP26.47■■□□□ 1.83
PPP1CA-208ENST00000532446 ABCC3O15438 1527 aa26.47■■□□□ 1.83
PPP1CA-208ENST00000532446 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
PPP1CA-208ENST00000532446 MLECQ14165 292 aa26.44■■□□□ 1.82
PPP1CA-208ENST00000532446 CCER1Q8TC90 406 aaPredicted RBP26.44■■□□□ 1.82
PPP1CA-208ENST00000532446 ADAMTSL3P82987 1691 aa26.43■■□□□ 1.82
PPP1CA-208ENST00000532446 PKD2Q13563 968 aa26.42■■□□□ 1.82
PPP1CA-208ENST00000532446 EFCAB6Q5THR3 1501 aa26.41■■□□□ 1.82
PPP1CA-208ENST00000532446 E9PCH4 1651 aa26.4■■□□□ 1.82
PPP1CA-208ENST00000532446 CAMSAP1Q5T5Y3 1602 aa26.4■■□□□ 1.82
PPP1CA-208ENST00000532446 CLTCQ00610 1675 aaKnown RBP26.39■■□□□ 1.82
PPP1CA-208ENST00000532446 FOXD1Q16676 465 aa26.36■■□□□ 1.81
PPP1CA-208ENST00000532446 CLSPNQ9HAW4 1339 aa26.36■■□□□ 1.81
PPP1CA-208ENST00000532446 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
PPP1CA-208ENST00000532446 ARHGAP31Q2M1Z3 1444 aa26.34■■□□□ 1.81
PPP1CA-208ENST00000532446 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
PPP1CA-208ENST00000532446 CNTLNQ9NXG0 1405 aa26.33■■□□□ 1.81
PPP1CA-208ENST00000532446 ANKRD30BQ9BXX2 1392 aa26.32■■□□□ 1.8
PPP1CA-208ENST00000532446 NPATQ14207 1427 aa26.32■■□□□ 1.8
PPP1CA-208ENST00000532446 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
PPP1CA-208ENST00000532446 PTPRMP28827 1452 aa26.32■■□□□ 1.8
PPP1CA-208ENST00000532446 ESF1Q9H501 851 aaKnown RBP26.31■■□□□ 1.8
PPP1CA-208ENST00000532446 MADDQ8WXG6 1647 aa26.31■■□□□ 1.8
PPP1CA-208ENST00000532446 CFAP65Q6ZU64 1925 aaKnown RBP26.3■■□□□ 1.8
PPP1CA-208ENST00000532446 SPHKAPQ2M3C7 1700 aa26.28■■□□□ 1.8
PPP1CA-208ENST00000532446 PLA2R1Q13018 1463 aa26.27■■□□□ 1.8
PPP1CA-208ENST00000532446 PTPRTO14522 1441 aa26.27■■□□□ 1.8
PPP1CA-208ENST00000532446 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
PPP1CA-208ENST00000532446 RIMS1Q86UR5 1692 aaKnown RBP26.23■■□□□ 1.79
PPP1CA-208ENST00000532446 PREX1Q8TCU6 1659 aa26.23■■□□□ 1.79
PPP1CA-208ENST00000532446 TRPM2O94759 1503 aa26.23■■□□□ 1.79
PPP1CA-208ENST00000532446 NOS1P29475 1434 aa26.22■■□□□ 1.79
PPP1CA-208ENST00000532446 C3P01024 1663 aa26.21■■□□□ 1.79
PPP1CA-208ENST00000532446 SIN3AQ96ST3 1273 aa26.2■■□□□ 1.78
PPP1CA-208ENST00000532446 ERVK-7P63135 1459 aa26.18■■□□□ 1.78
PPP1CA-208ENST00000532446 SYNMO15061 1565 aa26.17■■□□□ 1.78
PPP1CA-208ENST00000532446 SPATA31D1Q6ZQQ2 1576 aa26.17■■□□□ 1.78
PPP1CA-208ENST00000532446 FBXO31Q5XUX0 539 aaPredicted RBP26.17■■□□□ 1.78
PPP1CA-208ENST00000532446 CCDC144AA2RUR9 1427 aa26.16■■□□□ 1.78
PPP1CA-208ENST00000532446 CLTCL1P53675 1640 aa26.15■■□□□ 1.78
PPP1CA-208ENST00000532446 NEUROD1Q13562 356 aa26.13■■□□□ 1.77
PPP1CA-208ENST00000532446 PIK3C2BO00750 1634 aa26.12■■□□□ 1.77
PPP1CA-208ENST00000532446 UGGT1Q9NYU2 1555 aa26.12■■□□□ 1.77
PPP1CA-208ENST00000532446 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
PPP1CA-208ENST00000532446 SLC52A1Q9NWF4 448 aa26.07■■□□□ 1.76
PPP1CA-208ENST00000532446 KIF1BO60333 1816 aa26.06■■□□□ 1.76
PPP1CA-208ENST00000532446 TNRQ92752 1358 aa26.06■■□□□ 1.76
PPP1CA-208ENST00000532446 IDI1Q13907 227 aa26.03■■□□□ 1.76
PPP1CA-208ENST00000532446 LMTK3Q96Q04 1460 aa26.02■■□□□ 1.76
PPP1CA-208ENST00000532446 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
PPP1CA-208ENST00000532446 SPATA31E1Q6ZUB1 1445 aa26.02■■□□□ 1.76
PPP1CA-208ENST00000532446 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
PPP1CA-208ENST00000532446 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
PPP1CA-208ENST00000532446 ZEB1P37275 1124 aaPredicted RBP26■■□□□ 1.75
PPP1CA-208ENST00000532446 SETD1BQ9UPS6 1966 aaKnown RBP26■■□□□ 1.75
PPP1CA-208ENST00000532446 TONSLQ96HA7 1378 aa25.99■■□□□ 1.75
PPP1CA-208ENST00000532446 ADGRB3O60242 1522 aa25.98■■□□□ 1.75
PPP1CA-208ENST00000532446 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
PPP1CA-208ENST00000532446 TMEM131LA2VDJ0 1609 aa25.97■■□□□ 1.75
PPP1CA-208ENST00000532446 MYO5BQ9ULV0 1848 aa25.96■■□□□ 1.75
PPP1CA-208ENST00000532446 MYO3AQ8NEV4 1616 aa25.94■■□□□ 1.74
PPP1CA-208ENST00000532446 L3MBTL2Q969R5 705 aa25.94■■□□□ 1.74
PPP1CA-208ENST00000532446 KDM5AP29375 1690 aaKnown RBP25.94■■□□□ 1.74
PPP1CA-208ENST00000532446 RGL3Q3MIN7 710 aa25.93■■□□□ 1.74
PPP1CA-208ENST00000532446 CHGAP10645 457 aaKnown RBP25.92■■□□□ 1.74
PPP1CA-208ENST00000532446 UBR1Q8IWV7 1749 aa25.9■■□□□ 1.74
PPP1CA-208ENST00000532446 A2ML1A8K2U0 1454 aa25.89■■□□□ 1.74
PPP1CA-208ENST00000532446 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
PPP1CA-208ENST00000532446 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
PPP1CA-208ENST00000532446 HSPA2P54652 639 aa25.86■■□□□ 1.73
PPP1CA-208ENST00000532446 STAG3Q9UJ98 1225 aa25.86■■□□□ 1.73
PPP1CA-208ENST00000532446 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
PPP1CA-208ENST00000532446 PPLO60437 1756 aa25.85■■□□□ 1.73
PPP1CA-208ENST00000532446 PPP1R15AO75807 674 aaPredicted RBP25.85■■□□□ 1.73
PPP1CA-208ENST00000532446 ZNF326Q5BKZ1 582 aaKnown RBP25.85■■□□□ 1.73
PPP1CA-208ENST00000532446 DCAF11Q8TEB1 546 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms