RNA–Protein interactions for RNA: ENST00000532225.5

NFRKB-211, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 5

Gene NFRKB, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-211ENST00000532225 LMTK3Q96Q04 1460 aa35.35■■■■□ 3.25
NFRKB-211ENST00000532225 WASHC2CQ9Y4E1 1318 aa35.34■■■■□ 3.25
NFRKB-211ENST00000532225 PREX1Q8TCU6 1659 aa35.3■■■■□ 3.24
NFRKB-211ENST00000532225 HSPA2P54652 639 aa35.28■■■■□ 3.24
NFRKB-211ENST00000532225 UHRF1BP1Q6BDS2 1440 aa35.28■■■■□ 3.24
NFRKB-211ENST00000532225 EIF2AK4Q9P2K8 1649 aaKnown RBP35.28■■■■□ 3.24
NFRKB-211ENST00000532225 NPATQ14207 1427 aa35.25■■■■□ 3.23
NFRKB-211ENST00000532225 FAM135AQ9P2D6 1515 aa35.25■■■■□ 3.23
NFRKB-211ENST00000532225 NCOA1Q15788 1441 aa35.24■■■■□ 3.23
NFRKB-211ENST00000532225 KDM5DQ9BY66 1539 aa35.24■■■■□ 3.23
NFRKB-211ENST00000532225 ERBINQ96RT1 1412 aa35.23■■■■□ 3.23
NFRKB-211ENST00000532225 RNF17Q9BXT8 1623 aaKnown RBP35.21■■■■□ 3.23
NFRKB-211ENST00000532225 ITGAEP38570 1179 aa35.2■■■■□ 3.23
NFRKB-211ENST00000532225 ADGRL2O95490 1459 aa35.19■■■■□ 3.22
NFRKB-211ENST00000532225 PTPRKQ15262 1439 aa35.18■■■■□ 3.22
NFRKB-211ENST00000532225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.18■■■■□ 3.22
NFRKB-211ENST00000532225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.17■■■■□ 3.227e-8■□□□□ 10.9
NFRKB-211ENST00000532225 FBXO31Q5XUX0 539 aaPredicted RBP35.11■■■■□ 3.21
NFRKB-211ENST00000532225 KANK1Q14678 1352 aa35.11■■■■□ 3.21
NFRKB-211ENST00000532225 PZPP20742 1482 aa35.09■■■■□ 3.21
NFRKB-211ENST00000532225 ZC3H13Q5T200 1668 aaKnown RBP35.09■■■■□ 3.21
NFRKB-211ENST00000532225 ABCC3O15438 1527 aa35.09■■■■□ 3.21
NFRKB-211ENST00000532225 MROH1Q8NDA8 1641 aa35.07■■■■□ 3.21
NFRKB-211ENST00000532225 ROCK1Q13464 1354 aa35.06■■■■□ 3.2
NFRKB-211ENST00000532225 RRBP1Q9P2E9 1410 aaKnown RBP35.06■■■■□ 3.2
NFRKB-211ENST00000532225 ANKRD50Q9ULJ7 1429 aa35.06■■■■□ 3.2
NFRKB-211ENST00000532225 TNRQ92752 1358 aa35.04■■■■□ 3.2
NFRKB-211ENST00000532225 PRDM15P57071 1507 aaPredicted RBP35.02■■■■□ 3.2
NFRKB-211ENST00000532225 CEP152O94986 1710 aa35.01■■■■□ 3.2
NFRKB-211ENST00000532225 DEPDC5O75140 1603 aa34.99■■■■□ 3.19
NFRKB-211ENST00000532225 DMRT2Q9Y5R5 561 aa34.99■■■■□ 3.19
NFRKB-211ENST00000532225 MYO3AQ8NEV4 1616 aa34.99■■■■□ 3.19
NFRKB-211ENST00000532225 CAMSAP1Q5T5Y3 1602 aa34.96■■■■□ 3.19
NFRKB-211ENST00000532225 CEP170BQ9Y4F5 1589 aaPredicted RBP34.94■■■■□ 3.18
NFRKB-211ENST00000532225 CFAP65Q6ZU64 1925 aaKnown RBP34.94■■■■□ 3.18
NFRKB-211ENST00000532225 A2ML1A8K2U0 1454 aa34.92■■■■□ 3.18
NFRKB-211ENST00000532225 ZNF142P52746 1687 aaPredicted RBP34.92■■■■□ 3.18
NFRKB-211ENST00000532225 ARHGAP31Q2M1Z3 1444 aa34.9■■■■□ 3.18
NFRKB-211ENST00000532225 STRCQ7RTU9 1775 aa34.88■■■■□ 3.17
NFRKB-211ENST00000532225 ERVK-7P63135 1459 aa34.88■■■■□ 3.17
NFRKB-211ENST00000532225 NLRP1Q9C000 1473 aa34.87■■■■□ 3.17
NFRKB-211ENST00000532225 SPATA31D1Q6ZQQ2 1576 aa34.86■■■■□ 3.17
NFRKB-211ENST00000532225 VWDEQ8N2E2 1590 aa34.86■■■■□ 3.17
NFRKB-211ENST00000532225 LMTK2Q8IWU2 1503 aa34.86■■■■□ 3.17
NFRKB-211ENST00000532225 THEMISQ8N1K5 641 aaPredicted RBP34.85■■■■□ 3.17
NFRKB-211ENST00000532225 PKD2Q13563 968 aa34.83■■■■□ 3.17
NFRKB-211ENST00000532225 NCKAP5LQ9HCH0 1330 aa34.81■■■■□ 3.16
NFRKB-211ENST00000532225 PLA2R1Q13018 1463 aa34.78■■■■□ 3.16
NFRKB-211ENST00000532225 PTPRTO14522 1441 aa34.78■■■■□ 3.16
NFRKB-211ENST00000532225 UNC13BO14795 1591 aa34.77■■■■□ 3.16
NFRKB-211ENST00000532225 UGGT1Q9NYU2 1555 aa34.76■■■■□ 3.16
NFRKB-211ENST00000532225 NUP155O75694 1391 aa34.75■■■■□ 3.15
NFRKB-211ENST00000532225 EFCAB6Q5THR3 1501 aa34.74■■■■□ 3.15
NFRKB-211ENST00000532225 ANKLE2Q86XL3 938 aa34.72■■■■□ 3.15
NFRKB-211ENST00000532225 STAG3Q9UJ98 1225 aa34.7■■■■□ 3.15
NFRKB-211ENST00000532225 TET3O43151 1660 aa34.7■■■■□ 3.14
NFRKB-211ENST00000532225 NAIPQ13075 1403 aa34.69■■■■□ 3.14
NFRKB-211ENST00000532225 RPRD2Q5VT52 1461 aaKnown RBP34.68■■■■□ 3.14
NFRKB-211ENST00000532225 GCC2Q8IWJ2 1684 aa34.65■■■■□ 3.14
NFRKB-211ENST00000532225 IQGAP3Q86VI3 1631 aa34.64■■■■□ 3.14
NFRKB-211ENST00000532225 IDI1Q13907 227 aa34.64■■■■□ 3.14
NFRKB-211ENST00000532225 NOS1P29475 1434 aa34.64■■■■□ 3.14
NFRKB-211ENST00000532225 SLC52A1Q9NWF4 448 aa34.63■■■■□ 3.13
NFRKB-211ENST00000532225 HFM1A2PYH4 1435 aa34.63■■■■□ 3.13
NFRKB-211ENST00000532225 UBR1Q8IWV7 1749 aa34.59■■■■□ 3.13
NFRKB-211ENST00000532225 TRIM52Q96A61 297 aa34.59■■■■□ 3.13
NFRKB-211ENST00000532225 POLR1AO95602 1720 aaPredicted RBP34.58■■■■□ 3.13
NFRKB-211ENST00000532225 CERKQ8TCT0 537 aa34.57■■■■□ 3.12
NFRKB-211ENST00000532225 SYNMO15061 1565 aa34.57■■■■□ 3.12
NFRKB-211ENST00000532225 PIK3C2BO00750 1634 aa34.55■■■■□ 3.12
NFRKB-211ENST00000532225 E9PCH4 1651 aa34.54■■■■□ 3.12
NFRKB-211ENST00000532225 EID1Q9Y6B2 187 aa34.54■■■■□ 3.12
NFRKB-211ENST00000532225 TXNDC2Q86VQ3 553 aa34.52■■■■□ 3.12
NFRKB-211ENST00000532225 NPHP4O75161 1426 aaPredicted RBP34.49■■■■□ 3.11
NFRKB-211ENST00000532225 ILDR1Q86SU0 546 aaPredicted RBP34.49■■■■□ 3.11
NFRKB-211ENST00000532225 NEURL4Q96JN8 1562 aa34.48■■■■□ 3.11
NFRKB-211ENST00000532225 KDM5AP29375 1690 aaKnown RBP34.47■■■■□ 3.11
NFRKB-211ENST00000532225 TMEM2Q9UHN6 1383 aa34.47■■■■□ 3.11
NFRKB-211ENST00000532225 MED14O60244 1454 aa34.46■■■■□ 3.11
NFRKB-211ENST00000532225 CHGAP10645 457 aaKnown RBP34.46■■■■□ 3.11
NFRKB-211ENST00000532225 FBXO41Q8TF61 875 aa34.46■■■■□ 3.11
NFRKB-211ENST00000532225 SLIT1O75093 1534 aa34.45■■■■□ 3.11
NFRKB-211ENST00000532225 ZNF335Q9H4Z2 1342 aaPredicted RBP34.45■■■■□ 3.11
NFRKB-211ENST00000532225 LTKP29376 864 aa34.44■■■■□ 3.1
NFRKB-211ENST00000532225 SCAF11Q99590 1463 aaKnown RBP34.44■■■■□ 3.1
NFRKB-211ENST00000532225 ARHGAP23Q9P227 1491 aa34.44■■■■□ 3.1
NFRKB-211ENST00000532225 ADGRB3O60242 1522 aa34.42■■■■□ 3.1
NFRKB-211ENST00000532225 SLC4A1APQ9BWU0 796 aaKnown RBP34.42■■■■□ 3.1
NFRKB-211ENST00000532225 HDGFP51858 240 aaKnown RBP34.4■■■■□ 3.1
NFRKB-211ENST00000532225 IQGAP1P46940 1657 aa34.38■■■■□ 3.09
NFRKB-211ENST00000532225 LTBP4Q8N2S1 1624 aa34.38■■■■□ 3.09
NFRKB-211ENST00000532225 ACIN1Q9UKV3 1341 aaKnown RBP34.38■■■■□ 3.09
NFRKB-211ENST00000532225 SETD5Q9C0A6 1442 aa34.35■■■■□ 3.09
NFRKB-211ENST00000532225 SPHKAPQ2M3C7 1700 aa34.33■■■■□ 3.09
NFRKB-211ENST00000532225 BCANQ96GW7 911 aa34.32■■■■□ 3.08
NFRKB-211ENST00000532225 TMEM131LA2VDJ0 1609 aa34.31■■■■□ 3.08
NFRKB-211ENST00000532225 PPP1R15AO75807 674 aaPredicted RBP34.3■■■■□ 3.08
NFRKB-211ENST00000532225 MYO5BQ9ULV0 1848 aa34.3■■■■□ 3.08
NFRKB-211ENST00000532225 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.29■■■■□ 3.08
NFRKB-211ENST00000532225 RIMS2Q9UQ26 1411 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms