RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
POLB-217ENST00000532157 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
POLB-217ENST00000532157 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
POLB-217ENST00000532157 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
POLB-217ENST00000532157 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
POLB-217ENST00000532157 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
POLB-217ENST00000532157 CPS1P31327 1500 aa16.89■□□□□ 0.29
POLB-217ENST00000532157 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
POLB-217ENST00000532157 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
POLB-217ENST00000532157 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
POLB-217ENST00000532157 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
POLB-217ENST00000532157 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
POLB-217ENST00000532157 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
POLB-217ENST00000532157 HAX1O00165 279 aa16.87■□□□□ 0.29
POLB-217ENST00000532157 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
POLB-217ENST00000532157 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
POLB-217ENST00000532157 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
POLB-217ENST00000532157 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
POLB-217ENST00000532157 KIDINS220Q9ULH0 1771 aa16.81■□□□□ 0.28
POLB-217ENST00000532157 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
POLB-217ENST00000532157 KIF14Q15058 1648 aa16.8■□□□□ 0.28
POLB-217ENST00000532157 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
POLB-217ENST00000532157 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
POLB-217ENST00000532157 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
POLB-217ENST00000532157 EEA1Q15075 1411 aa16.78■□□□□ 0.28
POLB-217ENST00000532157 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
POLB-217ENST00000532157 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
POLB-217ENST00000532157 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
POLB-217ENST00000532157 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
POLB-217ENST00000532157 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
POLB-217ENST00000532157 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
POLB-217ENST00000532157 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
POLB-217ENST00000532157 ABCC1P33527 1531 aa16.74■□□□□ 0.27
POLB-217ENST00000532157 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
POLB-217ENST00000532157 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
POLB-217ENST00000532157 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
POLB-217ENST00000532157 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
POLB-217ENST00000532157 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
POLB-217ENST00000532157 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
POLB-217ENST00000532157 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
POLB-217ENST00000532157 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
POLB-217ENST00000532157 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
POLB-217ENST00000532157 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
POLB-217ENST00000532157 EVX2Q03828 476 aa16.65■□□□□ 0.26
POLB-217ENST00000532157 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
POLB-217ENST00000532157 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.25
POLB-217ENST00000532157 CLIP1P30622 1438 aa16.63■□□□□ 0.25
POLB-217ENST00000532157 MED14O60244 1454 aa16.63■□□□□ 0.25
POLB-217ENST00000532157 ANKLE2Q86XL3 938 aa16.63■□□□□ 0.25
POLB-217ENST00000532157 GGT6Q6P531 493 aa16.62■□□□□ 0.25
POLB-217ENST00000532157 DEPDC5O75140 1603 aa16.61■□□□□ 0.25
POLB-217ENST00000532157 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
POLB-217ENST00000532157 SYNMO15061 1565 aa16.6■□□□□ 0.25
POLB-217ENST00000532157 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLB-217ENST00000532157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLB-217ENST00000532157 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
POLB-217ENST00000532157 A2MP01023 1474 aa16.59■□□□□ 0.25
POLB-217ENST00000532157 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
POLB-217ENST00000532157 TNRQ92752 1358 aa16.57■□□□□ 0.24
POLB-217ENST00000532157 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
POLB-217ENST00000532157 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
POLB-217ENST00000532157 ATP7AQ04656 1500 aa16.56■□□□□ 0.24
POLB-217ENST00000532157 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
POLB-217ENST00000532157 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
POLB-217ENST00000532157 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
POLB-217ENST00000532157 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
POLB-217ENST00000532157 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
POLB-217ENST00000532157 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
POLB-217ENST00000532157 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
POLB-217ENST00000532157 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
POLB-217ENST00000532157 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.24
POLB-217ENST00000532157 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
POLB-217ENST00000532157 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
POLB-217ENST00000532157 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
POLB-217ENST00000532157 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
POLB-217ENST00000532157 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
POLB-217ENST00000532157 PZPP20742 1482 aa16.49■□□□□ 0.23
POLB-217ENST00000532157 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
POLB-217ENST00000532157 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
POLB-217ENST00000532157 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
POLB-217ENST00000532157 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
POLB-217ENST00000532157 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
POLB-217ENST00000532157 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
POLB-217ENST00000532157 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
POLB-217ENST00000532157 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
POLB-217ENST00000532157 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
POLB-217ENST00000532157 KDM5DQ9BY66 1539 aa16.41■□□□□ 0.22
POLB-217ENST00000532157 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
POLB-217ENST00000532157 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
POLB-217ENST00000532157 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
POLB-217ENST00000532157 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
POLB-217ENST00000532157 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
POLB-217ENST00000532157 JCADQ9P266 1359 aa16.37■□□□□ 0.21
POLB-217ENST00000532157 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
POLB-217ENST00000532157 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
POLB-217ENST00000532157 KIF3BO15066 747 aa16.35■□□□□ 0.21
POLB-217ENST00000532157 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
POLB-217ENST00000532157 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
POLB-217ENST00000532157 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
POLB-217ENST00000532157 SCAF11Q99590 1463 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms