RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 AEBP2Q6ZN18 517 aaPredicted RBP31.79■■■□□ 2.68
POLB-217ENST00000532157 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
POLB-217ENST00000532157 SENP3Q9H4L4 574 aaPredicted RBP27.07■■□□□ 1.92
POLB-217ENST00000532157 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
POLB-217ENST00000532157 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
POLB-217ENST00000532157 FOXD1Q16676 465 aa25.22■■□□□ 1.63
POLB-217ENST00000532157 ABCC9O60706 1549 aa24.39■■□□□ 1.49
POLB-217ENST00000532157 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
POLB-217ENST00000532157 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
POLB-217ENST00000532157 PPP6R1Q9UPN7 881 aa23.75■■□□□ 1.39
POLB-217ENST00000532157 ADRA2BP18089 450 aa23.71■■□□□ 1.39
POLB-217ENST00000532157 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
POLB-217ENST00000532157 MSH5O43196 834 aa23.52■■□□□ 1.36
POLB-217ENST00000532157 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
POLB-217ENST00000532157 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
POLB-217ENST00000532157 POTEDQ86YR6 584 aa22.68■■□□□ 1.22
POLB-217ENST00000532157 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
POLB-217ENST00000532157 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
POLB-217ENST00000532157 NACADO15069 1562 aa22.44■■□□□ 1.18
POLB-217ENST00000532157 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
POLB-217ENST00000532157 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
POLB-217ENST00000532157 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
POLB-217ENST00000532157 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
POLB-217ENST00000532157 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
POLB-217ENST00000532157 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
POLB-217ENST00000532157 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
POLB-217ENST00000532157 MAPK8IP2Q13387 824 aaPredicted RBP21.74■■□□□ 1.07
POLB-217ENST00000532157 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
POLB-217ENST00000532157 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
POLB-217ENST00000532157 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
POLB-217ENST00000532157 CUX2O14529 1486 aa21.4■■□□□ 1.02
POLB-217ENST00000532157 PPP4R3CPQ6ZMV5 832 aa21.37■■□□□ 1.01
POLB-217ENST00000532157 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
POLB-217ENST00000532157 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
POLB-217ENST00000532157 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
POLB-217ENST00000532157 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
POLB-217ENST00000532157 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
POLB-217ENST00000532157 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
POLB-217ENST00000532157 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
POLB-217ENST00000532157 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
POLB-217ENST00000532157 DCAF8L1A6NGE4 600 aa20.72■□□□□ 0.91
POLB-217ENST00000532157 NESP48681 1621 aa20.71■□□□□ 0.91
POLB-217ENST00000532157 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
POLB-217ENST00000532157 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
POLB-217ENST00000532157 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
POLB-217ENST00000532157 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
POLB-217ENST00000532157 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
POLB-217ENST00000532157 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
POLB-217ENST00000532157 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
POLB-217ENST00000532157 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
POLB-217ENST00000532157 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
POLB-217ENST00000532157 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
POLB-217ENST00000532157 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
POLB-217ENST00000532157 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
POLB-217ENST00000532157 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
POLB-217ENST00000532157 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
POLB-217ENST00000532157 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
POLB-217ENST00000532157 WDR62O43379 1518 aa20.19■□□□□ 0.82
POLB-217ENST00000532157 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
POLB-217ENST00000532157 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
POLB-217ENST00000532157 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
POLB-217ENST00000532157 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
POLB-217ENST00000532157 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
POLB-217ENST00000532157 KCNA4P22459 653 aa20.09■□□□□ 0.81
POLB-217ENST00000532157 RNF39Q9H2S5 420 aa20.09■□□□□ 0.81
POLB-217ENST00000532157 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
POLB-217ENST00000532157 ARHGEF11O15085 1522 aa19.96■□□□□ 0.79
POLB-217ENST00000532157 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
POLB-217ENST00000532157 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
POLB-217ENST00000532157 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
POLB-217ENST00000532157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
POLB-217ENST00000532157 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
POLB-217ENST00000532157 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
POLB-217ENST00000532157 C1QBPQ07021 282 aaKnown RBP19.81■□□□□ 0.76
POLB-217ENST00000532157 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
POLB-217ENST00000532157 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
POLB-217ENST00000532157 CFTRP13569 1480 aa19.65■□□□□ 0.74
POLB-217ENST00000532157 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
POLB-217ENST00000532157 WIZO95785 1651 aa19.57■□□□□ 0.72
POLB-217ENST00000532157 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
POLB-217ENST00000532157 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
POLB-217ENST00000532157 CHD1O14646 1710 aa19.52■□□□□ 0.72
POLB-217ENST00000532157 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
POLB-217ENST00000532157 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
POLB-217ENST00000532157 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
POLB-217ENST00000532157 FBLN2P98095 1184 aa19.36■□□□□ 0.69
POLB-217ENST00000532157 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
POLB-217ENST00000532157 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
POLB-217ENST00000532157 SLC4A2P04920 1241 aa19.34■□□□□ 0.69
POLB-217ENST00000532157 ILDR1Q86SU0 546 aaPredicted RBP19.32■□□□□ 0.68
POLB-217ENST00000532157 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
POLB-217ENST00000532157 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
POLB-217ENST00000532157 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
POLB-217ENST00000532157 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
POLB-217ENST00000532157 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
POLB-217ENST00000532157 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
POLB-217ENST00000532157 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
POLB-217ENST00000532157 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
POLB-217ENST00000532157 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
POLB-217ENST00000532157 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms