RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
NXF1-210ENST00000531579 FAM135AQ9P2D6 1515 aa22.75■■□□□ 1.23
NXF1-210ENST00000531579 EIF2AK4Q9P2K8 1649 aaKnown RBP22.74■■□□□ 1.23
NXF1-210ENST00000531579 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
NXF1-210ENST00000531579 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
NXF1-210ENST00000531579 NPATQ14207 1427 aa22.73■■□□□ 1.23
NXF1-210ENST00000531579 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
NXF1-210ENST00000531579 ROCK1Q13464 1354 aa22.72■■□□□ 1.23
NXF1-210ENST00000531579 C3P01024 1663 aa22.71■■□□□ 1.23
NXF1-210ENST00000531579 ITGAEP38570 1179 aa22.7■■□□□ 1.22
NXF1-210ENST00000531579 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
NXF1-210ENST00000531579 CLTCQ00610 1675 aaKnown RBP22.7■■□□□ 1.22
NXF1-210ENST00000531579 LMTK3Q96Q04 1460 aa22.69■■□□□ 1.22
NXF1-210ENST00000531579 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
NXF1-210ENST00000531579 RNF17Q9BXT8 1623 aaKnown RBP22.68■■□□□ 1.22
NXF1-210ENST00000531579 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
NXF1-210ENST00000531579 ANKRD50Q9ULJ7 1429 aa22.66■■□□□ 1.22
NXF1-210ENST00000531579 KANK1Q14678 1352 aa22.66■■□□□ 1.22
NXF1-210ENST00000531579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.221e-7■■■□□ 16.1
NXF1-210ENST00000531579 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
NXF1-210ENST00000531579 HSPA2P54652 639 aa22.62■■□□□ 1.21
NXF1-210ENST00000531579 PZPP20742 1482 aa22.61■■□□□ 1.21
NXF1-210ENST00000531579 FBXO31Q5XUX0 539 aaPredicted RBP22.61■■□□□ 1.21
NXF1-210ENST00000531579 ABCC3O15438 1527 aa22.6■■□□□ 1.21
NXF1-210ENST00000531579 ZC3H13Q5T200 1668 aaKnown RBP22.58■■□□□ 1.21
NXF1-210ENST00000531579 MROH1Q8NDA8 1641 aa22.58■■□□□ 1.21
NXF1-210ENST00000531579 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
NXF1-210ENST00000531579 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
NXF1-210ENST00000531579 TNRQ92752 1358 aa22.56■■□□□ 1.2
NXF1-210ENST00000531579 DEPDC5O75140 1603 aa22.56■■□□□ 1.2
NXF1-210ENST00000531579 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
NXF1-210ENST00000531579 LMTK2Q8IWU2 1503 aa22.52■■□□□ 1.19
NXF1-210ENST00000531579 VWDEQ8N2E2 1590 aa22.5■■□□□ 1.19
NXF1-210ENST00000531579 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
NXF1-210ENST00000531579 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
NXF1-210ENST00000531579 A2ML1A8K2U0 1454 aa22.47■■□□□ 1.19
NXF1-210ENST00000531579 CAMSAP1Q5T5Y3 1602 aa22.47■■□□□ 1.19
NXF1-210ENST00000531579 CEP152O94986 1710 aa22.47■■□□□ 1.19
NXF1-210ENST00000531579 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
NXF1-210ENST00000531579 NUP155O75694 1391 aa22.46■■□□□ 1.19
NXF1-210ENST00000531579 ERVK-7P63135 1459 aa22.46■■□□□ 1.19
NXF1-210ENST00000531579 NAIPQ13075 1403 aa22.45■■□□□ 1.18
NXF1-210ENST00000531579 MYO3AQ8NEV4 1616 aa22.45■■□□□ 1.18
NXF1-210ENST00000531579 PKD2Q13563 968 aa22.44■■□□□ 1.18
NXF1-210ENST00000531579 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
NXF1-210ENST00000531579 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
NXF1-210ENST00000531579 UNC13BO14795 1591 aa22.42■■□□□ 1.18
NXF1-210ENST00000531579 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
NXF1-210ENST00000531579 SLC52A1Q9NWF4 448 aa22.41■■□□□ 1.18
NXF1-210ENST00000531579 ZNF142P52746 1687 aaPredicted RBP22.41■■□□□ 1.18
NXF1-210ENST00000531579 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
NXF1-210ENST00000531579 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
NXF1-210ENST00000531579 EFCAB6Q5THR3 1501 aa22.39■■□□□ 1.17
NXF1-210ENST00000531579 ANKLE2Q86XL3 938 aa22.38■■□□□ 1.17
NXF1-210ENST00000531579 PTPRTO14522 1441 aa22.38■■□□□ 1.17
NXF1-210ENST00000531579 IDI1Q13907 227 aa22.37■■□□□ 1.17
NXF1-210ENST00000531579 NOS1P29475 1434 aa22.37■■□□□ 1.17
NXF1-210ENST00000531579 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
NXF1-210ENST00000531579 NCKAP5LQ9HCH0 1330 aa22.36■■□□□ 1.17
NXF1-210ENST00000531579 STRCQ7RTU9 1775 aa22.36■■□□□ 1.17
NXF1-210ENST00000531579 TET3O43151 1660 aa22.36■■□□□ 1.17
NXF1-210ENST00000531579 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
NXF1-210ENST00000531579 TRIM52Q96A61 297 aa22.35■■□□□ 1.17
NXF1-210ENST00000531579 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
NXF1-210ENST00000531579 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
NXF1-210ENST00000531579 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.16
NXF1-210ENST00000531579 EID1Q9Y6B2 187 aa22.27■■□□□ 1.16
NXF1-210ENST00000531579 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
NXF1-210ENST00000531579 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
NXF1-210ENST00000531579 HDGFP51858 240 aaKnown RBP22.25■■□□□ 1.15
NXF1-210ENST00000531579 TXNDC2Q86VQ3 553 aa22.25■■□□□ 1.15
NXF1-210ENST00000531579 SYNMO15061 1565 aa22.25■■□□□ 1.15
NXF1-210ENST00000531579 E9PCH4 1651 aa22.24■■□□□ 1.15
NXF1-210ENST00000531579 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
NXF1-210ENST00000531579 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
NXF1-210ENST00000531579 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
NXF1-210ENST00000531579 MED14O60244 1454 aa22.22■■□□□ 1.15
NXF1-210ENST00000531579 PIK3C2BO00750 1634 aa22.21■■□□□ 1.15
NXF1-210ENST00000531579 HRCP23327 699 aa22.21■■□□□ 1.15
NXF1-210ENST00000531579 ARHGAP23Q9P227 1491 aa22.21■■□□□ 1.15
NXF1-210ENST00000531579 SLIT1O75093 1534 aa22.21■■□□□ 1.15
NXF1-210ENST00000531579 LTKP29376 864 aa22.19■■□□□ 1.14
NXF1-210ENST00000531579 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
NXF1-210ENST00000531579 MPHOSPH9Q99550 1183 aa22.19■■□□□ 1.14
NXF1-210ENST00000531579 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
NXF1-210ENST00000531579 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
NXF1-210ENST00000531579 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
NXF1-210ENST00000531579 POLR1AO95602 1720 aaPredicted RBP22.15■■□□□ 1.14
NXF1-210ENST00000531579 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
NXF1-210ENST00000531579 ADGRB3O60242 1522 aa22.15■■□□□ 1.14
NXF1-210ENST00000531579 RAB3GAP2Q9H2M9 1393 aa22.14■■□□□ 1.14
NXF1-210ENST00000531579 NEURL4Q96JN8 1562 aa22.14■■□□□ 1.13
NXF1-210ENST00000531579 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
NXF1-210ENST00000531579 TMEM131LA2VDJ0 1609 aa22.1■■□□□ 1.13
NXF1-210ENST00000531579 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
NXF1-210ENST00000531579 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
NXF1-210ENST00000531579 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
NXF1-210ENST00000531579 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.13
NXF1-210ENST00000531579 IQGAP1P46940 1657 aa22.07■■□□□ 1.12
NXF1-210ENST00000531579 RIMS2Q9UQ26 1411 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms