RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CRBNQ96SW2 442 aa9.99□□□□□ -0.81
PTPRK-219ENST00000531050 SAMD9Q5K651 1589 aa9.99□□□□□ -0.81
PTPRK-219ENST00000531050 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
PTPRK-219ENST00000531050 SNAPC4Q5SXM2 1469 aa9.98□□□□□ -0.81
PTPRK-219ENST00000531050 MCM4P33991 863 aa9.98□□□□□ -0.81
PTPRK-219ENST00000531050 MTERF4Q7Z6M4 381 aaKnown RBP9.98□□□□□ -0.81
PTPRK-219ENST00000531050 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
PTPRK-219ENST00000531050 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
PTPRK-219ENST00000531050 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
PTPRK-219ENST00000531050 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-219ENST00000531050 FTSJ3Q8IY81 847 aaKnown RBP9.97□□□□□ -0.81
PTPRK-219ENST00000531050 ARID3AQ99856 593 aa9.97□□□□□ -0.81
PTPRK-219ENST00000531050 PLIN1O60240 522 aa9.96□□□□□ -0.81
PTPRK-219ENST00000531050 ANP32BQ92688 251 aaKnown RBP9.96□□□□□ -0.81
PTPRK-219ENST00000531050 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.81
PTPRK-219ENST00000531050 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.81
PTPRK-219ENST00000531050 TRAK2O60296 914 aa9.96□□□□□ -0.82
PTPRK-219ENST00000531050 KIF20AO95235 890 aa9.96□□□□□ -0.82
PTPRK-219ENST00000531050 FMN1Q68DA7 1419 aa9.96□□□□□ -0.82
PTPRK-219ENST00000531050 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
PTPRK-219ENST00000531050 GAPVD1Q14C86 1478 aa9.96□□□□□ -0.82
PTPRK-219ENST00000531050 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
PTPRK-219ENST00000531050 BECN1Q14457 450 aa9.95□□□□□ -0.82
PTPRK-219ENST00000531050 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-219ENST00000531050 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-219ENST00000531050 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-219ENST00000531050 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
PTPRK-219ENST00000531050 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
PTPRK-219ENST00000531050 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
PTPRK-219ENST00000531050 GTPBP4Q9BZE4 634 aaKnown RBP9.94□□□□□ -0.82
PTPRK-219ENST00000531050 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
PTPRK-219ENST00000531050 TDRD9Q8NDG6 1382 aaKnown RBP9.94□□□□□ -0.82
PTPRK-219ENST00000531050 UACAQ9BZF9 1416 aa9.94□□□□□ -0.82
PTPRK-219ENST00000531050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.94□□□□□ -0.825e-6■■□□□ 12.8
PTPRK-219ENST00000531050 UQCRHLA0A096LP55 91 aa9.93□□□□□ -0.82
PTPRK-219ENST00000531050 UQCRHP07919 91 aa9.93□□□□□ -0.82
PTPRK-219ENST00000531050 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
PTPRK-219ENST00000531050 THOC2Q8NI27 1593 aaKnown RBP9.93□□□□□ -0.82
PTPRK-219ENST00000531050 TNNT2P45379 298 aaPredicted RBP9.93□□□□□ -0.82
PTPRK-219ENST00000531050 DYNC1I1O14576 645 aa9.92□□□□□ -0.82
PTPRK-219ENST00000531050 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
PTPRK-219ENST00000531050 CCDC18Q5T9S5 1454 aa9.92□□□□□ -0.82
PTPRK-219ENST00000531050 PBRM1Q86U86 1689 aa9.92□□□□□ -0.82
PTPRK-219ENST00000531050 CHRM1P11229 460 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-219ENST00000531050 GRIN2BQ13224 1484 aa9.92□□□□□ -0.82
PTPRK-219ENST00000531050 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
PTPRK-219ENST00000531050 FGD6Q6ZV73 1430 aa9.91□□□□□ -0.82
PTPRK-219ENST00000531050 LETM1O95202 739 aaPredicted RBP9.91□□□□□ -0.82
PTPRK-219ENST00000531050 PPP1R9BQ96SB3 815 aa9.91□□□□□ -0.82
PTPRK-219ENST00000531050 TEX2Q8IWB9 1127 aa9.91□□□□□ -0.82
PTPRK-219ENST00000531050 SEC24BO95487 1268 aa9.9□□□□□ -0.82
PTPRK-219ENST00000531050 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.82
PTPRK-219ENST00000531050 SPATA31E1Q6ZUB1 1445 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 ZBTB22O15209 634 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 CCDC173Q0VFZ6 552 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 SECISBP2LQ93073 1101 aaKnown RBP9.89□□□□□ -0.83
PTPRK-219ENST00000531050 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
PTPRK-219ENST00000531050 SUPT6HQ7KZ85 1726 aaKnown RBP9.88□□□□□ -0.83
PTPRK-219ENST00000531050 BRD2P25440 801 aaKnown RBP9.88□□□□□ -0.83
PTPRK-219ENST00000531050 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
PTPRK-219ENST00000531050 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
PTPRK-219ENST00000531050 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
PTPRK-219ENST00000531050 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
PTPRK-219ENST00000531050 MSNP26038 577 aaKnown RBP9.87□□□□□ -0.83
PTPRK-219ENST00000531050 NCBP3Q53F19 620 aaKnown RBP9.87□□□□□ -0.83
PTPRK-219ENST00000531050 VIRMAQ69YN4 1812 aaKnown RBP9.87□□□□□ -0.83
PTPRK-219ENST00000531050 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-219ENST00000531050 TAF3Q5VWG9 929 aa9.87□□□□□ -0.83
PTPRK-219ENST00000531050 PTPN23Q9H3S7 1636 aa9.87□□□□□ -0.83
PTPRK-219ENST00000531050 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-219ENST00000531050 DHX37Q8IY37 1157 aaKnown RBP9.86□□□□□ -0.83
PTPRK-219ENST00000531050 HFM1A2PYH4 1435 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 ARHGEF11O15085 1522 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 UGGT2Q9NYU1 1516 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 PTPRKQ15262 1439 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 DDX11L8A8MPP1 907 aa9.85□□□□□ -0.83
PTPRK-219ENST00000531050 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.85□□□□□ -0.83
PTPRK-219ENST00000531050 CBX1P83916 185 aa9.84□□□□□ -0.83
PTPRK-219ENST00000531050 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-219ENST00000531050 CHMP5Q9NZZ3 219 aa9.84□□□□□ -0.83
PTPRK-219ENST00000531050 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
PTPRK-219ENST00000531050 RGS22Q8NE09 1264 aa9.84□□□□□ -0.83
PTPRK-219ENST00000531050 L3MBTL2Q969R5 705 aa9.84□□□□□ -0.83
PTPRK-219ENST00000531050 DNTTIP2Q5QJE6 756 aaKnown RBP9.83□□□□□ -0.84
PTPRK-219ENST00000531050 SASS6Q6UVJ0 657 aa9.83□□□□□ -0.84
PTPRK-219ENST00000531050 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
PTPRK-219ENST00000531050 CGNQ9P2M7 1197 aaKnown RBP9.83□□□□□ -0.84
PTPRK-219ENST00000531050 NOL7Q9UMY1 257 aaKnown RBP9.83□□□□□ -0.84
PTPRK-219ENST00000531050 BRD4O60885 1362 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-219ENST00000531050 ATP2B3Q16720 1220 aa9.83□□□□□ -0.84
PTPRK-219ENST00000531050 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
PTPRK-219ENST00000531050 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
PTPRK-219ENST00000531050 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
PTPRK-219ENST00000531050 DENND4BO75064 1496 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms