RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
BRK1-201ENST00000530758 KIF3BO15066 747 aa24.22■■□□□ 1.47
BRK1-201ENST00000530758 NAIPQ13075 1403 aa24.21■■□□□ 1.47
BRK1-201ENST00000530758 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
BRK1-201ENST00000530758 LMTK3Q96Q04 1460 aa24.2■■□□□ 1.47
BRK1-201ENST00000530758 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
BRK1-201ENST00000530758 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
BRK1-201ENST00000530758 FAM135AQ9P2D6 1515 aa24.16■■□□□ 1.46
BRK1-201ENST00000530758 GGT6Q6P531 493 aa24.16■■□□□ 1.46
BRK1-201ENST00000530758 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
BRK1-201ENST00000530758 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
BRK1-201ENST00000530758 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
BRK1-201ENST00000530758 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
BRK1-201ENST00000530758 CNTLNQ9NXG0 1405 aa24.11■■□□□ 1.45
BRK1-201ENST00000530758 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
BRK1-201ENST00000530758 UNC13BO14795 1591 aa24.11■■□□□ 1.45
BRK1-201ENST00000530758 VWDEQ8N2E2 1590 aa24.11■■□□□ 1.45
BRK1-201ENST00000530758 C3P01024 1663 aa24.1■■□□□ 1.45
BRK1-201ENST00000530758 MROH2AA6NES4 1674 aa24.09■■□□□ 1.45
BRK1-201ENST00000530758 ZC3H13Q5T200 1668 aaKnown RBP24.08■■□□□ 1.45
BRK1-201ENST00000530758 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.44
BRK1-201ENST00000530758 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
BRK1-201ENST00000530758 CLTCQ00610 1675 aaKnown RBP24.06■■□□□ 1.44
BRK1-201ENST00000530758 HRCP23327 699 aa24.05■■□□□ 1.44
BRK1-201ENST00000530758 ESF1Q9H501 851 aaKnown RBP24.05■■□□□ 1.44
BRK1-201ENST00000530758 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
BRK1-201ENST00000530758 PREX1Q8TCU6 1659 aa24.05■■□□□ 1.44
BRK1-201ENST00000530758 ABCC3O15438 1527 aa24.05■■□□□ 1.44
BRK1-201ENST00000530758 LMTK2Q8IWU2 1503 aa24.05■■□□□ 1.44
BRK1-201ENST00000530758 KANK1Q14678 1352 aa24.03■■□□□ 1.44
BRK1-201ENST00000530758 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
BRK1-201ENST00000530758 HSPA2P54652 639 aa24.02■■□□□ 1.44
BRK1-201ENST00000530758 CEP152O94986 1710 aa24.01■■□□□ 1.43
BRK1-201ENST00000530758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.434e-10■□□□□ 10.5
BRK1-201ENST00000530758 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
BRK1-201ENST00000530758 NUP155O75694 1391 aa23.98■■□□□ 1.43
BRK1-201ENST00000530758 ARHGAP31Q2M1Z3 1444 aa23.98■■□□□ 1.43
BRK1-201ENST00000530758 CAMSAP1Q5T5Y3 1602 aa23.97■■□□□ 1.43
BRK1-201ENST00000530758 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
BRK1-201ENST00000530758 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
BRK1-201ENST00000530758 TET3O43151 1660 aa23.95■■□□□ 1.43
BRK1-201ENST00000530758 PZPP20742 1482 aa23.94■■□□□ 1.42
BRK1-201ENST00000530758 EFCAB6Q5THR3 1501 aa23.91■■□□□ 1.42
BRK1-201ENST00000530758 NPATQ14207 1427 aa23.91■■□□□ 1.42
BRK1-201ENST00000530758 UHRF1BP1Q6BDS2 1440 aa23.91■■□□□ 1.42
BRK1-201ENST00000530758 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.42
BRK1-201ENST00000530758 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
BRK1-201ENST00000530758 STRCQ7RTU9 1775 aa23.88■■□□□ 1.41
BRK1-201ENST00000530758 CFAP65Q6ZU64 1925 aaKnown RBP23.87■■□□□ 1.41
BRK1-201ENST00000530758 E9PCH4 1651 aa23.86■■□□□ 1.41
BRK1-201ENST00000530758 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
BRK1-201ENST00000530758 FBXO31Q5XUX0 539 aaPredicted RBP23.84■■□□□ 1.41
BRK1-201ENST00000530758 ERVK-7P63135 1459 aa23.82■■□□□ 1.4
BRK1-201ENST00000530758 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
BRK1-201ENST00000530758 NOS1P29475 1434 aa23.82■■□□□ 1.4
BRK1-201ENST00000530758 SLC4A1APQ9BWU0 796 aaKnown RBP23.81■■□□□ 1.4
BRK1-201ENST00000530758 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
BRK1-201ENST00000530758 ILDR1Q86SU0 546 aaPredicted RBP23.8■■□□□ 1.4
BRK1-201ENST00000530758 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
BRK1-201ENST00000530758 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
BRK1-201ENST00000530758 TNRQ92752 1358 aa23.78■■□□□ 1.4
BRK1-201ENST00000530758 PTPRTO14522 1441 aa23.77■■□□□ 1.4
BRK1-201ENST00000530758 PKD2Q13563 968 aa23.77■■□□□ 1.4
BRK1-201ENST00000530758 SYNMO15061 1565 aa23.74■■□□□ 1.39
BRK1-201ENST00000530758 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
BRK1-201ENST00000530758 SPHKAPQ2M3C7 1700 aa23.73■■□□□ 1.39
BRK1-201ENST00000530758 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
BRK1-201ENST00000530758 SLC52A1Q9NWF4 448 aa23.72■■□□□ 1.39
BRK1-201ENST00000530758 PIK3C2BO00750 1634 aa23.7■■□□□ 1.39
BRK1-201ENST00000530758 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
BRK1-201ENST00000530758 A2ML1A8K2U0 1454 aa23.68■■□□□ 1.38
BRK1-201ENST00000530758 TRPM2O94759 1503 aa23.68■■□□□ 1.38
BRK1-201ENST00000530758 KDM5AP29375 1690 aaKnown RBP23.67■■□□□ 1.38
BRK1-201ENST00000530758 IDI1Q13907 227 aa23.67■■□□□ 1.38
BRK1-201ENST00000530758 FOXD1Q16676 465 aa23.64■■□□□ 1.37
BRK1-201ENST00000530758 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
BRK1-201ENST00000530758 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
BRK1-201ENST00000530758 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
BRK1-201ENST00000530758 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
BRK1-201ENST00000530758 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
BRK1-201ENST00000530758 DHX57Q6P158 1386 aaKnown RBP23.6■■□□□ 1.37
BRK1-201ENST00000530758 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
BRK1-201ENST00000530758 THEMISQ8N1K5 641 aaPredicted RBP23.59■■□□□ 1.37
BRK1-201ENST00000530758 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
BRK1-201ENST00000530758 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
BRK1-201ENST00000530758 KIF1BO60333 1816 aa23.56■■□□□ 1.36
BRK1-201ENST00000530758 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
BRK1-201ENST00000530758 CERKQ8TCT0 537 aa23.56■■□□□ 1.36
BRK1-201ENST00000530758 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
BRK1-201ENST00000530758 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
BRK1-201ENST00000530758 CCDC144AA2RUR9 1427 aa23.54■■□□□ 1.36
BRK1-201ENST00000530758 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
BRK1-201ENST00000530758 ARHGAP23Q9P227 1491 aa23.52■■□□□ 1.36
BRK1-201ENST00000530758 POLR1AO95602 1720 aaPredicted RBP23.52■■□□□ 1.36
BRK1-201ENST00000530758 SLIT1O75093 1534 aa23.52■■□□□ 1.36
BRK1-201ENST00000530758 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
BRK1-201ENST00000530758 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
BRK1-201ENST00000530758 SPATA31E1Q6ZUB1 1445 aa23.47■■□□□ 1.35
BRK1-201ENST00000530758 ZFYVE9O95405 1425 aa23.44■■□□□ 1.34
BRK1-201ENST00000530758 ZNF335Q9H4Z2 1342 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms