RNA–Protein interactions for RNA: ENST00000528487.1

SYVN1-210, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-210ENST00000528487 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
SYVN1-210ENST00000528487 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
SYVN1-210ENST00000528487 ANKRD50Q9ULJ7 1429 aa21.16■□□□□ 0.98
SYVN1-210ENST00000528487 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
SYVN1-210ENST00000528487 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
SYVN1-210ENST00000528487 CEBPAP49715 358 aaPredicted RBP21.15■□□□□ 0.98
SYVN1-210ENST00000528487 RNF17Q9BXT8 1623 aaKnown RBP21.14■□□□□ 0.97
SYVN1-210ENST00000528487 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
SYVN1-210ENST00000528487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.973e-6■■□□□ 11.7
SYVN1-210ENST00000528487 FAM135AQ9P2D6 1515 aa21.1■□□□□ 0.97
SYVN1-210ENST00000528487 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
SYVN1-210ENST00000528487 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
SYVN1-210ENST00000528487 MROH1Q8NDA8 1641 aa21.09■□□□□ 0.97
SYVN1-210ENST00000528487 MROH2AA6NES4 1674 aa21.08■□□□□ 0.96
SYVN1-210ENST00000528487 KANK1Q14678 1352 aa21.08■□□□□ 0.96
SYVN1-210ENST00000528487 NAIPQ13075 1403 aa21.07■□□□□ 0.96
SYVN1-210ENST00000528487 C3P01024 1663 aa21.06■□□□□ 0.96
SYVN1-210ENST00000528487 PRDM15P57071 1507 aaPredicted RBP21.06■□□□□ 0.96
SYVN1-210ENST00000528487 DEPDC5O75140 1603 aa21.06■□□□□ 0.96
SYVN1-210ENST00000528487 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
SYVN1-210ENST00000528487 ABCC3O15438 1527 aa21.05■□□□□ 0.96
SYVN1-210ENST00000528487 ZC3H13Q5T200 1668 aaKnown RBP21.02■□□□□ 0.95
SYVN1-210ENST00000528487 NPATQ14207 1427 aa21.01■□□□□ 0.95
SYVN1-210ENST00000528487 VWDEQ8N2E2 1590 aa21■□□□□ 0.95
SYVN1-210ENST00000528487 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
SYVN1-210ENST00000528487 PZPP20742 1482 aa20.99■□□□□ 0.95
SYVN1-210ENST00000528487 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
SYVN1-210ENST00000528487 LMTK2Q8IWU2 1503 aa20.98■□□□□ 0.95
SYVN1-210ENST00000528487 CEP152O94986 1710 aa20.98■□□□□ 0.95
SYVN1-210ENST00000528487 NUP155O75694 1391 aa20.97■□□□□ 0.95
SYVN1-210ENST00000528487 UNC13BO14795 1591 aa20.97■□□□□ 0.95
SYVN1-210ENST00000528487 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
SYVN1-210ENST00000528487 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
SYVN1-210ENST00000528487 CAMSAP1Q5T5Y3 1602 aa20.95■□□□□ 0.94
SYVN1-210ENST00000528487 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
SYVN1-210ENST00000528487 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
SYVN1-210ENST00000528487 TNRQ92752 1358 aa20.92■□□□□ 0.94
SYVN1-210ENST00000528487 PREX1Q8TCU6 1659 aa20.91■□□□□ 0.94
SYVN1-210ENST00000528487 TRIM52Q96A61 297 aa20.91■□□□□ 0.94
SYVN1-210ENST00000528487 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
SYVN1-210ENST00000528487 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.94
SYVN1-210ENST00000528487 EFCAB6Q5THR3 1501 aa20.89■□□□□ 0.94
SYVN1-210ENST00000528487 ERVK-7P63135 1459 aa20.89■□□□□ 0.94
SYVN1-210ENST00000528487 TET3O43151 1660 aa20.87■□□□□ 0.93
SYVN1-210ENST00000528487 HSPA2P54652 639 aa20.87■□□□□ 0.93
SYVN1-210ENST00000528487 SPATA31D1Q6ZQQ2 1576 aa20.87■□□□□ 0.93
SYVN1-210ENST00000528487 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
SYVN1-210ENST00000528487 RPRD2Q5VT52 1461 aaKnown RBP20.86■□□□□ 0.93
SYVN1-210ENST00000528487 CFAP65Q6ZU64 1925 aaKnown RBP20.84■□□□□ 0.93
SYVN1-210ENST00000528487 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
SYVN1-210ENST00000528487 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.93
SYVN1-210ENST00000528487 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
SYVN1-210ENST00000528487 NOS1P29475 1434 aa20.82■□□□□ 0.92
SYVN1-210ENST00000528487 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
SYVN1-210ENST00000528487 SLC4A1APQ9BWU0 796 aaKnown RBP20.82■□□□□ 0.92
SYVN1-210ENST00000528487 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
SYVN1-210ENST00000528487 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
SYVN1-210ENST00000528487 HRCP23327 699 aa20.8■□□□□ 0.92
SYVN1-210ENST00000528487 E9PCH4 1651 aa20.8■□□□□ 0.92
SYVN1-210ENST00000528487 PKD2Q13563 968 aa20.79■□□□□ 0.92
SYVN1-210ENST00000528487 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
SYVN1-210ENST00000528487 SLC52A1Q9NWF4 448 aa20.78■□□□□ 0.92
SYVN1-210ENST00000528487 IDI1Q13907 227 aa20.77■□□□□ 0.92
SYVN1-210ENST00000528487 THEMISQ8N1K5 641 aaPredicted RBP20.77■□□□□ 0.92
SYVN1-210ENST00000528487 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
SYVN1-210ENST00000528487 SYNMO15061 1565 aa20.76■□□□□ 0.91
SYVN1-210ENST00000528487 UGGT1Q9NYU2 1555 aa20.74■□□□□ 0.91
SYVN1-210ENST00000528487 PTPRTO14522 1441 aa20.72■□□□□ 0.91
SYVN1-210ENST00000528487 STAG3Q9UJ98 1225 aa20.72■□□□□ 0.91
SYVN1-210ENST00000528487 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
SYVN1-210ENST00000528487 FOXD1Q16676 465 aa20.69■□□□□ 0.9
SYVN1-210ENST00000528487 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
SYVN1-210ENST00000528487 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
SYVN1-210ENST00000528487 DMRT2Q9Y5R5 561 aa20.67■□□□□ 0.9
SYVN1-210ENST00000528487 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
SYVN1-210ENST00000528487 ANKLE2Q86XL3 938 aa20.66■□□□□ 0.9
SYVN1-210ENST00000528487 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
SYVN1-210ENST00000528487 STRCQ7RTU9 1775 aa20.65■□□□□ 0.9
SYVN1-210ENST00000528487 TRPM2O94759 1503 aa20.64■□□□□ 0.9
SYVN1-210ENST00000528487 CHGAP10645 457 aaKnown RBP20.64■□□□□ 0.89
SYVN1-210ENST00000528487 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.89
SYVN1-210ENST00000528487 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
SYVN1-210ENST00000528487 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
SYVN1-210ENST00000528487 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
SYVN1-210ENST00000528487 ARHGAP23Q9P227 1491 aa20.61■□□□□ 0.89
SYVN1-210ENST00000528487 SLIT1O75093 1534 aa20.6■□□□□ 0.89
SYVN1-210ENST00000528487 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
SYVN1-210ENST00000528487 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
SYVN1-210ENST00000528487 LTKP29376 864 aa20.59■□□□□ 0.89
SYVN1-210ENST00000528487 CLTCL1P53675 1640 aa20.58■□□□□ 0.89
SYVN1-210ENST00000528487 CCDC144AA2RUR9 1427 aa20.56■□□□□ 0.88
SYVN1-210ENST00000528487 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
SYVN1-210ENST00000528487 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
SYVN1-210ENST00000528487 MED14O60244 1454 aa20.55■□□□□ 0.88
SYVN1-210ENST00000528487 POLR1AO95602 1720 aaPredicted RBP20.54■□□□□ 0.88
SYVN1-210ENST00000528487 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
SYVN1-210ENST00000528487 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
SYVN1-210ENST00000528487 NEURL4Q96JN8 1562 aa20.54■□□□□ 0.88
SYVN1-210ENST00000528487 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
SYVN1-210ENST00000528487 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms