RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 RTEL1-TNFRSF6BF6WH68 1400 aa10.94□□□□□ -0.66
SOX6-211ENST00000528429 ERBINQ96RT1 1412 aa10.94□□□□□ -0.66
SOX6-211ENST00000528429 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
SOX6-211ENST00000528429 KIF3BO15066 747 aa10.94□□□□□ -0.66
SOX6-211ENST00000528429 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
SOX6-211ENST00000528429 ZNF518AQ6AHZ1 1483 aa10.93□□□□□ -0.66
SOX6-211ENST00000528429 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
SOX6-211ENST00000528429 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
SOX6-211ENST00000528429 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
SOX6-211ENST00000528429 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
SOX6-211ENST00000528429 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.66
SOX6-211ENST00000528429 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
SOX6-211ENST00000528429 TEX14Q8IWB6 1497 aa10.9□□□□□ -0.66
SOX6-211ENST00000528429 UNC13BO14795 1591 aa10.9□□□□□ -0.67
SOX6-211ENST00000528429 CFAP74Q9C0B2 1584 aa10.9□□□□□ -0.67
SOX6-211ENST00000528429 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
SOX6-211ENST00000528429 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
SOX6-211ENST00000528429 NEO1Q92859 1461 aa10.89□□□□□ -0.67
SOX6-211ENST00000528429 NBPF8Q3BBV2 869 aa10.89□□□□□ -0.67
SOX6-211ENST00000528429 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
SOX6-211ENST00000528429 RGL3Q3MIN7 710 aa10.88□□□□□ -0.67
SOX6-211ENST00000528429 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
SOX6-211ENST00000528429 KANK1Q14678 1352 aa10.87□□□□□ -0.67
SOX6-211ENST00000528429 MIER1Q8N108 512 aa10.87□□□□□ -0.67
SOX6-211ENST00000528429 GGT6Q6P531 493 aa10.87□□□□□ -0.67
SOX6-211ENST00000528429 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
SOX6-211ENST00000528429 KIDINS220Q9ULH0 1771 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 DIP2BQ9P265 1576 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 MAGI2Q86UL8 1455 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 IQGAP3Q86VI3 1631 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 DCAF11Q8TEB1 546 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 A2MP01023 1474 aa10.86□□□□□ -0.67
SOX6-211ENST00000528429 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
SOX6-211ENST00000528429 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
SOX6-211ENST00000528429 GLI2P10070 1586 aa10.85□□□□□ -0.67
SOX6-211ENST00000528429 KDM5CP41229 1560 aa10.85□□□□□ -0.67
SOX6-211ENST00000528429 PLA2R1Q13018 1463 aa10.84□□□□□ -0.67
SOX6-211ENST00000528429 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
SOX6-211ENST00000528429 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
SOX6-211ENST00000528429 HECW2Q9P2P5 1572 aa10.84□□□□□ -0.67
SOX6-211ENST00000528429 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
SOX6-211ENST00000528429 YEATS2Q9ULM3 1422 aa10.82□□□□□ -0.68
SOX6-211ENST00000528429 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
SOX6-211ENST00000528429 DEPDC5O75140 1603 aa10.8□□□□□ -0.68
SOX6-211ENST00000528429 WASHC2CQ9Y4E1 1318 aa10.8□□□□□ -0.68
SOX6-211ENST00000528429 FRMPD1Q5SYB0 1578 aa10.79□□□□□ -0.68
SOX6-211ENST00000528429 PRDM15P57071 1507 aaPredicted RBP10.79□□□□□ -0.68
SOX6-211ENST00000528429 EIF2AK4Q9P2K8 1649 aaKnown RBP10.79□□□□□ -0.68
SOX6-211ENST00000528429 KCNA4P22459 653 aa10.79□□□□□ -0.68
SOX6-211ENST00000528429 E9PCH4 1651 aa10.78□□□□□ -0.68
SOX6-211ENST00000528429 ATP10AO60312 1499 aa10.78□□□□□ -0.68
SOX6-211ENST00000528429 MROH1Q8NDA8 1641 aa10.78□□□□□ -0.68
SOX6-211ENST00000528429 YTHDC1Q96MU7 727 aaKnown RBP10.78□□□□□ -0.68
SOX6-211ENST00000528429 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
SOX6-211ENST00000528429 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
SOX6-211ENST00000528429 DIP2CQ9Y2E4 1556 aa10.77□□□□□ -0.68
SOX6-211ENST00000528429 VWDEQ8N2E2 1590 aa10.77□□□□□ -0.69
SOX6-211ENST00000528429 TET3O43151 1660 aa10.76□□□□□ -0.69
SOX6-211ENST00000528429 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
SOX6-211ENST00000528429 PKNOX2Q96KN3 472 aa10.76□□□□□ -0.69
SOX6-211ENST00000528429 USP47Q96K76 1375 aa10.76□□□□□ -0.69
SOX6-211ENST00000528429 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
SOX6-211ENST00000528429 POLR3GLQ9BT43 218 aa10.75□□□□□ -0.69
SOX6-211ENST00000528429 UHRF1BP1Q6BDS2 1440 aa10.75□□□□□ -0.69
SOX6-211ENST00000528429 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
SOX6-211ENST00000528429 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
SOX6-211ENST00000528429 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
SOX6-211ENST00000528429 TRPM2O94759 1503 aa10.74□□□□□ -0.69
SOX6-211ENST00000528429 PTPRTO14522 1441 aa10.74□□□□□ -0.69
SOX6-211ENST00000528429 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
SOX6-211ENST00000528429 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
SOX6-211ENST00000528429 MLECQ14165 292 aa10.74□□□□□ -0.69
SOX6-211ENST00000528429 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
SOX6-211ENST00000528429 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
SOX6-211ENST00000528429 CEP152O94986 1710 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 UGGT1Q9NYU2 1555 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
SOX6-211ENST00000528429 RALGAPBQ86X10 1494 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 COL17A1Q9UMD9 1497 aaPredicted RBP10.73□□□□□ -0.69
SOX6-211ENST00000528429 NPATQ14207 1427 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 NBPF1Q3BBV0 1214 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 SPHKAPQ2M3C7 1700 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 SPATA31E1Q6ZUB1 1445 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 PRAG1Q86YV5 1406 aa10.73□□□□□ -0.69
SOX6-211ENST00000528429 CLTCL1P53675 1640 aa10.72□□□□□ -0.69
SOX6-211ENST00000528429 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
SOX6-211ENST00000528429 ABCC3O15438 1527 aa10.71□□□□□ -0.69
SOX6-211ENST00000528429 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.7
SOX6-211ENST00000528429 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.7
SOX6-211ENST00000528429 CFAP65Q6ZU64 1925 aaKnown RBP10.71□□□□□ -0.7
SOX6-211ENST00000528429 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
SOX6-211ENST00000528429 ANP32CO43423 234 aa10.7□□□□□ -0.7
SOX6-211ENST00000528429 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
SOX6-211ENST00000528429 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
SOX6-211ENST00000528429 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
SOX6-211ENST00000528429 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
SOX6-211ENST00000528429 ANP32EQ9BTT0 268 aa10.68□□□□□ -0.7
SOX6-211ENST00000528429 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
SOX6-211ENST00000528429 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms