RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SPATA31E1Q6ZUB1 1445 aa22.28■■□□□ 1.16
FOXRED1-207ENST00000527004 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
FOXRED1-207ENST00000527004 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
FOXRED1-207ENST00000527004 PLA2R1Q13018 1463 aa22.25■■□□□ 1.15
FOXRED1-207ENST00000527004 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
FOXRED1-207ENST00000527004 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
FOXRED1-207ENST00000527004 ANP32CO43423 234 aa22.22■■□□□ 1.15
FOXRED1-207ENST00000527004 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
FOXRED1-207ENST00000527004 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
FOXRED1-207ENST00000527004 RALGAPBQ86X10 1494 aa22.2■■□□□ 1.15
FOXRED1-207ENST00000527004 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
FOXRED1-207ENST00000527004 EIF2AK4Q9P2K8 1649 aaKnown RBP22.19■■□□□ 1.14
FOXRED1-207ENST00000527004 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
FOXRED1-207ENST00000527004 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
FOXRED1-207ENST00000527004 KANK1Q14678 1352 aa22.17■■□□□ 1.14
FOXRED1-207ENST00000527004 CCDC7Q96M83 1385 aa22.17■■□□□ 1.14
FOXRED1-207ENST00000527004 NEO1Q92859 1461 aa22.17■■□□□ 1.14
FOXRED1-207ENST00000527004 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
FOXRED1-207ENST00000527004 VWDEQ8N2E2 1590 aa22.15■■□□□ 1.14
FOXRED1-207ENST00000527004 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
FOXRED1-207ENST00000527004 KDM5CP41229 1560 aa22.15■■□□□ 1.14
FOXRED1-207ENST00000527004 MLH3Q9UHC1 1453 aa22.15■■□□□ 1.14
FOXRED1-207ENST00000527004 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
FOXRED1-207ENST00000527004 USP47Q96K76 1375 aa22.14■■□□□ 1.13
FOXRED1-207ENST00000527004 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 KIF3BO15066 747 aa22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 PTPRTO14522 1441 aa22.12■■□□□ 1.13
FOXRED1-207ENST00000527004 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
FOXRED1-207ENST00000527004 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
FOXRED1-207ENST00000527004 TET3O43151 1660 aa22.1■■□□□ 1.13
FOXRED1-207ENST00000527004 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
FOXRED1-207ENST00000527004 E9PCH4 1651 aa22.09■■□□□ 1.13
FOXRED1-207ENST00000527004 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
FOXRED1-207ENST00000527004 A2MP01023 1474 aa22.09■■□□□ 1.13
FOXRED1-207ENST00000527004 GLI2P10070 1586 aa22.08■■□□□ 1.13
FOXRED1-207ENST00000527004 TRPM2O94759 1503 aa22.08■■□□□ 1.13
FOXRED1-207ENST00000527004 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.12
FOXRED1-207ENST00000527004 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
FOXRED1-207ENST00000527004 POLR1AO95602 1720 aaPredicted RBP22.07■■□□□ 1.12
FOXRED1-207ENST00000527004 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
FOXRED1-207ENST00000527004 RGL3Q3MIN7 710 aa22.05■■□□□ 1.12
FOXRED1-207ENST00000527004 HECW2Q9P2P5 1572 aa22.05■■□□□ 1.12
FOXRED1-207ENST00000527004 MAP3K4Q9Y6R4 1608 aa22.05■■□□□ 1.12
FOXRED1-207ENST00000527004 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
FOXRED1-207ENST00000527004 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
FOXRED1-207ENST00000527004 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
FOXRED1-207ENST00000527004 TRPM1Q7Z4N2 1603 aa22.01■■□□□ 1.11
FOXRED1-207ENST00000527004 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
FOXRED1-207ENST00000527004 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
FOXRED1-207ENST00000527004 SPHKAPQ2M3C7 1700 aa22.01■■□□□ 1.11
FOXRED1-207ENST00000527004 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
FOXRED1-207ENST00000527004 BCORL1Q5H9F3 1711 aa21.99■■□□□ 1.11
FOXRED1-207ENST00000527004 LAMC1P11047 1609 aa21.98■■□□□ 1.11
FOXRED1-207ENST00000527004 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
FOXRED1-207ENST00000527004 EFCAB6Q5THR3 1501 aa21.97■■□□□ 1.11
FOXRED1-207ENST00000527004 ST20-MTHFSA0A0A6YYL1 179 aa21.95■■□□□ 1.1
FOXRED1-207ENST00000527004 CEP152O94986 1710 aa21.95■■□□□ 1.1
FOXRED1-207ENST00000527004 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
FOXRED1-207ENST00000527004 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
FOXRED1-207ENST00000527004 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
FOXRED1-207ENST00000527004 ABCA6Q8N139 1617 aa21.94■■□□□ 1.1
FOXRED1-207ENST00000527004 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
FOXRED1-207ENST00000527004 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
FOXRED1-207ENST00000527004 FAM69CQ0P6D2 419 aa21.91■■□□□ 1.1
FOXRED1-207ENST00000527004 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
FOXRED1-207ENST00000527004 RICTORQ6R327 1708 aa21.9■■□□□ 1.1
FOXRED1-207ENST00000527004 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.1
FOXRED1-207ENST00000527004 DIP2CQ9Y2E4 1556 aa21.89■■□□□ 1.09
FOXRED1-207ENST00000527004 MADDQ8WXG6 1647 aa21.87■■□□□ 1.09
FOXRED1-207ENST00000527004 GGT6Q6P531 493 aa21.87■■□□□ 1.09
FOXRED1-207ENST00000527004 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
FOXRED1-207ENST00000527004 WASHC2CQ9Y4E1 1318 aa21.84■■□□□ 1.09
FOXRED1-207ENST00000527004 NPATQ14207 1427 aa21.84■■□□□ 1.09
FOXRED1-207ENST00000527004 ABCC3O15438 1527 aa21.84■■□□□ 1.09
FOXRED1-207ENST00000527004 MYOM2P54296 1465 aa21.83■■□□□ 1.08
FOXRED1-207ENST00000527004 TESK2Q96S53 571 aa21.8■■□□□ 1.08
FOXRED1-207ENST00000527004 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
FOXRED1-207ENST00000527004 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
FOXRED1-207ENST00000527004 YEATS2Q9ULM3 1422 aa21.79■■□□□ 1.08
FOXRED1-207ENST00000527004 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
FOXRED1-207ENST00000527004 KIF1BO60333 1816 aa21.78■■□□□ 1.08
FOXRED1-207ENST00000527004 COL17A1Q9UMD9 1497 aaPredicted RBP21.78■■□□□ 1.08
FOXRED1-207ENST00000527004 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
FOXRED1-207ENST00000527004 ADGRB3O60242 1522 aa21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 NOS1P29475 1434 aa21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 KTN1Q86UP2 1357 aaKnown RBP21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 TMF1P82094 1093 aa21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
FOXRED1-207ENST00000527004 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
FOXRED1-207ENST00000527004 NRXN1Q9ULB1 1477 aa21.74■■□□□ 1.07
FOXRED1-207ENST00000527004 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
FOXRED1-207ENST00000527004 REREQ9P2R6 1566 aa21.72■■□□□ 1.07
FOXRED1-207ENST00000527004 IQGAP1P46940 1657 aa21.72■■□□□ 1.07
FOXRED1-207ENST00000527004 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
FOXRED1-207ENST00000527004 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
FOXRED1-207ENST00000527004 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms