RNA–Protein interactions for RNA: ENST00000525532.5

SORL1-204, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-204ENST00000525532 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
SORL1-204ENST00000525532 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
SORL1-204ENST00000525532 GCC2Q8IWJ2 1684 aa12.41□□□□□ -0.42
SORL1-204ENST00000525532 MAST1Q9Y2H9 1570 aa12.41□□□□□ -0.42
SORL1-204ENST00000525532 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
SORL1-204ENST00000525532 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
SORL1-204ENST00000525532 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
SORL1-204ENST00000525532 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
SORL1-204ENST00000525532 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
SORL1-204ENST00000525532 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
SORL1-204ENST00000525532 HECW2Q9P2P5 1572 aa12.39□□□□□ -0.43
SORL1-204ENST00000525532 YEATS2Q9ULM3 1422 aa12.38□□□□□ -0.43
SORL1-204ENST00000525532 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
SORL1-204ENST00000525532 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
SORL1-204ENST00000525532 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
SORL1-204ENST00000525532 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
SORL1-204ENST00000525532 RGL3Q3MIN7 710 aa12.37□□□□□ -0.43
SORL1-204ENST00000525532 ATP10AO60312 1499 aa12.36□□□□□ -0.43
SORL1-204ENST00000525532 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
SORL1-204ENST00000525532 KDM6BO15054 1643 aa12.36□□□□□ -0.43
SORL1-204ENST00000525532 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
SORL1-204ENST00000525532 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
SORL1-204ENST00000525532 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
SORL1-204ENST00000525532 KDM5CP41229 1560 aa12.34□□□□□ -0.43
SORL1-204ENST00000525532 INO80Q9ULG1 1556 aaPredicted RBP12.33□□□□□ -0.43
SORL1-204ENST00000525532 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
SORL1-204ENST00000525532 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
SORL1-204ENST00000525532 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
SORL1-204ENST00000525532 PZPP20742 1482 aa12.31□□□□□ -0.44
SORL1-204ENST00000525532 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
SORL1-204ENST00000525532 KIDINS220Q9ULH0 1771 aa12.31□□□□□ -0.44
SORL1-204ENST00000525532 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
SORL1-204ENST00000525532 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
SORL1-204ENST00000525532 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
SORL1-204ENST00000525532 RICTORQ6R327 1708 aa12.27□□□□□ -0.44
SORL1-204ENST00000525532 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.44
SORL1-204ENST00000525532 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.45
SORL1-204ENST00000525532 PPP1R15AO75807 674 aaPredicted RBP12.27□□□□□ -0.45
SORL1-204ENST00000525532 ABCA6Q8N139 1617 aa12.27□□□□□ -0.45
SORL1-204ENST00000525532 PPRC1Q5VV67 1664 aaKnown RBP12.27□□□□□ -0.45
SORL1-204ENST00000525532 BCANQ96GW7 911 aa12.24□□□□□ -0.45
SORL1-204ENST00000525532 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
SORL1-204ENST00000525532 EIF2AK4Q9P2K8 1649 aaKnown RBP12.24□□□□□ -0.45
SORL1-204ENST00000525532 UNC13BO14795 1591 aa12.23□□□□□ -0.45
SORL1-204ENST00000525532 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
SORL1-204ENST00000525532 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
SORL1-204ENST00000525532 SLC52A1Q9NWF4 448 aa12.22□□□□□ -0.45
SORL1-204ENST00000525532 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
SORL1-204ENST00000525532 ARHGEF40Q8TER5 1519 aa12.22□□□□□ -0.45
SORL1-204ENST00000525532 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
SORL1-204ENST00000525532 IQGAP3Q86VI3 1631 aa12.21□□□□□ -0.46
SORL1-204ENST00000525532 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
SORL1-204ENST00000525532 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
SORL1-204ENST00000525532 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
SORL1-204ENST00000525532 AGLP35573 1532 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 NPATQ14207 1427 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 CNTLNQ9NXG0 1405 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
SORL1-204ENST00000525532 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 CEBPAP49715 358 aaPredicted RBP12.18□□□□□ -0.46
SORL1-204ENST00000525532 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
SORL1-204ENST00000525532 ABCC3O15438 1527 aa12.17□□□□□ -0.46
SORL1-204ENST00000525532 IDI1Q13907 227 aa12.17□□□□□ -0.46
SORL1-204ENST00000525532 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
SORL1-204ENST00000525532 TET3O43151 1660 aa12.17□□□□□ -0.46
SORL1-204ENST00000525532 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
SORL1-204ENST00000525532 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
SORL1-204ENST00000525532 EFCAB6Q5THR3 1501 aa12.15□□□□□ -0.46
SORL1-204ENST00000525532 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
SORL1-204ENST00000525532 CFAP65Q6ZU64 1925 aaKnown RBP12.15□□□□□ -0.46
SORL1-204ENST00000525532 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
SORL1-204ENST00000525532 DEPDC5O75140 1603 aa12.14□□□□□ -0.47
SORL1-204ENST00000525532 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
SORL1-204ENST00000525532 LMTK2Q8IWU2 1503 aa12.14□□□□□ -0.47
SORL1-204ENST00000525532 ROCK2O75116 1388 aaKnown RBP12.13□□□□□ -0.47
SORL1-204ENST00000525532 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
SORL1-204ENST00000525532 TNRQ92752 1358 aa12.13□□□□□ -0.47
SORL1-204ENST00000525532 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
SORL1-204ENST00000525532 CEP152O94986 1710 aa12.12□□□□□ -0.47
SORL1-204ENST00000525532 PTPRTO14522 1441 aa12.12□□□□□ -0.47
SORL1-204ENST00000525532 EID1Q9Y6B2 187 aa12.12□□□□□ -0.47
SORL1-204ENST00000525532 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
SORL1-204ENST00000525532 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
SORL1-204ENST00000525532 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
SORL1-204ENST00000525532 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
SORL1-204ENST00000525532 TRPM2O94759 1503 aa12.11□□□□□ -0.47
SORL1-204ENST00000525532 E9PCH4 1651 aa12.1□□□□□ -0.47
SORL1-204ENST00000525532 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
SORL1-204ENST00000525532 THEMISQ8N1K5 641 aaPredicted RBP12.09□□□□□ -0.47
SORL1-204ENST00000525532 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
SORL1-204ENST00000525532 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
SORL1-204ENST00000525532 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
SORL1-204ENST00000525532 NOS1P29475 1434 aa12.07□□□□□ -0.48
SORL1-204ENST00000525532 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
SORL1-204ENST00000525532 UGGT1Q9NYU2 1555 aa12.07□□□□□ -0.48
SORL1-204ENST00000525532 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
SORL1-204ENST00000525532 SPHKAPQ2M3C7 1700 aa12.07□□□□□ -0.48
SORL1-204ENST00000525532 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
SORL1-204ENST00000525532 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms