RNA–Protein interactions for RNA: ENST00000524536.5

USP33-211, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-211ENST00000524536 NPHP4O75161 1426 aaPredicted RBP20.84■□□□□ 0.93
USP33-211ENST00000524536 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.93
USP33-211ENST00000524536 VWDEQ8N2E2 1590 aa20.83■□□□□ 0.92
USP33-211ENST00000524536 MED14O60244 1454 aa20.82■□□□□ 0.92
USP33-211ENST00000524536 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
USP33-211ENST00000524536 CFDP1Q9UEE9 299 aaPredicted RBP20.82■□□□□ 0.92
USP33-211ENST00000524536 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
USP33-211ENST00000524536 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
USP33-211ENST00000524536 POTEAQ6S8J7 498 aa20.8■□□□□ 0.92
USP33-211ENST00000524536 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
USP33-211ENST00000524536 LRRC7Q96NW7 1537 aa20.78■□□□□ 0.92
USP33-211ENST00000524536 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
USP33-211ENST00000524536 GPATCH8Q9UKJ3 1502 aaKnown RBP20.78■□□□□ 0.92
USP33-211ENST00000524536 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
USP33-211ENST00000524536 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
USP33-211ENST00000524536 CASKIN1Q8WXD9 1431 aa20.76■□□□□ 0.91
USP33-211ENST00000524536 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
USP33-211ENST00000524536 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
USP33-211ENST00000524536 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
USP33-211ENST00000524536 PZPP20742 1482 aa20.75■□□□□ 0.91
USP33-211ENST00000524536 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
USP33-211ENST00000524536 DEPDC5O75140 1603 aa20.74■□□□□ 0.91
USP33-211ENST00000524536 UGGT1Q9NYU2 1555 aa20.73■□□□□ 0.91
USP33-211ENST00000524536 KIF3BO15066 747 aa20.73■□□□□ 0.91
USP33-211ENST00000524536 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
USP33-211ENST00000524536 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
USP33-211ENST00000524536 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
USP33-211ENST00000524536 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
USP33-211ENST00000524536 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
USP33-211ENST00000524536 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
USP33-211ENST00000524536 SYNMO15061 1565 aa20.68■□□□□ 0.9
USP33-211ENST00000524536 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
USP33-211ENST00000524536 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
USP33-211ENST00000524536 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
USP33-211ENST00000524536 RSPH4AQ5TD94 716 aa20.6■□□□□ 0.89
USP33-211ENST00000524536 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
USP33-211ENST00000524536 FYCO1Q9BQS8 1478 aa20.59■□□□□ 0.89
USP33-211ENST00000524536 MBD5Q9P267 1494 aa20.59■□□□□ 0.89
USP33-211ENST00000524536 UPF1Q92900 1129 aaKnown RBP eCLIP20.59■□□□□ 0.89
USP33-211ENST00000524536 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
USP33-211ENST00000524536 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
USP33-211ENST00000524536 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
USP33-211ENST00000524536 SCAF11Q99590 1463 aaKnown RBP20.53■□□□□ 0.88
USP33-211ENST00000524536 LTKP29376 864 aa20.51■□□□□ 0.87
USP33-211ENST00000524536 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
USP33-211ENST00000524536 TMEM94Q12767 1356 aa20.49■□□□□ 0.87
USP33-211ENST00000524536 JCADQ9P266 1359 aa20.49■□□□□ 0.87
USP33-211ENST00000524536 TSPY4P0CV99 314 aa20.49■□□□□ 0.87
USP33-211ENST00000524536 TSPY10P0CW01 314 aa20.49■□□□□ 0.87
USP33-211ENST00000524536 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
USP33-211ENST00000524536 KCNA6P17658 529 aa20.47■□□□□ 0.87
USP33-211ENST00000524536 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
USP33-211ENST00000524536 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
USP33-211ENST00000524536 LRRC9Q6ZRR7 1453 aa20.45■□□□□ 0.86
USP33-211ENST00000524536 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
USP33-211ENST00000524536 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
USP33-211ENST00000524536 ERVK-7P63135 1459 aa20.44■□□□□ 0.86
USP33-211ENST00000524536 SLAIN2Q9P270 581 aa20.44■□□□□ 0.86
USP33-211ENST00000524536 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
USP33-211ENST00000524536 MEX3CQ5U5Q3 659 aaKnown RBP20.43■□□□□ 0.86
USP33-211ENST00000524536 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
USP33-211ENST00000524536 SLIT1O75093 1534 aa20.42■□□□□ 0.86
USP33-211ENST00000524536 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
USP33-211ENST00000524536 RXRBP28702 533 aa20.41■□□□□ 0.86
USP33-211ENST00000524536 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
USP33-211ENST00000524536 XIRP1Q702N8 1843 aaKnown RBP20.4■□□□□ 0.86
USP33-211ENST00000524536 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
USP33-211ENST00000524536 TIAM1Q13009 1591 aa20.39■□□□□ 0.85
USP33-211ENST00000524536 ABCC3O15438 1527 aa20.39■□□□□ 0.85
USP33-211ENST00000524536 MSH6P52701 1360 aa20.39■□□□□ 0.85
USP33-211ENST00000524536 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
USP33-211ENST00000524536 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
USP33-211ENST00000524536 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
USP33-211ENST00000524536 TMEM2Q9UHN6 1383 aa20.36■□□□□ 0.85
USP33-211ENST00000524536 FGD6Q6ZV73 1430 aa20.34■□□□□ 0.85
USP33-211ENST00000524536 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
USP33-211ENST00000524536 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
USP33-211ENST00000524536 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
USP33-211ENST00000524536 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
USP33-211ENST00000524536 CAMSAP2Q08AD1 1489 aa20.31■□□□□ 0.84
USP33-211ENST00000524536 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
USP33-211ENST00000524536 PHLPP1O60346 1717 aa20.3■□□□□ 0.84
USP33-211ENST00000524536 ARHGAP31Q2M1Z3 1444 aa20.29■□□□□ 0.84
USP33-211ENST00000524536 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
USP33-211ENST00000524536 BCANQ96GW7 911 aa20.28■□□□□ 0.84
USP33-211ENST00000524536 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
USP33-211ENST00000524536 LRP6O75581 1613 aa20.26■□□□□ 0.83
USP33-211ENST00000524536 SRCAPQ6ZRS2 3230 aa20.26■□□□□ 0.83
USP33-211ENST00000524536 IDI1Q13907 227 aa20.24■□□□□ 0.83
USP33-211ENST00000524536 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
USP33-211ENST00000524536 TET3O43151 1660 aa20.22■□□□□ 0.83
USP33-211ENST00000524536 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
USP33-211ENST00000524536 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
USP33-211ENST00000524536 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
USP33-211ENST00000524536 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
USP33-211ENST00000524536 EFCAB6Q5THR3 1501 aa20.21■□□□□ 0.83
USP33-211ENST00000524536 C14orf37Q86TY3 774 aa20.2■□□□□ 0.82
USP33-211ENST00000524536 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
USP33-211ENST00000524536 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
USP33-211ENST00000524536 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms