RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 KDM5CP41229 1560 aa14.14□□□□□ -0.15
VPS13B-212ENST00000524330 HECW2Q9P2P5 1572 aa14.14□□□□□ -0.15
VPS13B-212ENST00000524330 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
VPS13B-212ENST00000524330 CCDC144AA2RUR9 1427 aa14.13□□□□□ -0.15
VPS13B-212ENST00000524330 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
VPS13B-212ENST00000524330 A2MP01023 1474 aa14.12□□□□□ -0.15
VPS13B-212ENST00000524330 KIF3BO15066 747 aa14.11□□□□□ -0.15
VPS13B-212ENST00000524330 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
VPS13B-212ENST00000524330 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
VPS13B-212ENST00000524330 ATP10AO60312 1499 aa14.08□□□□□ -0.16
VPS13B-212ENST00000524330 TET3O43151 1660 aa14.07□□□□□ -0.16
VPS13B-212ENST00000524330 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS13B-212ENST00000524330 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
VPS13B-212ENST00000524330 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
VPS13B-212ENST00000524330 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
VPS13B-212ENST00000524330 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
VPS13B-212ENST00000524330 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
VPS13B-212ENST00000524330 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
VPS13B-212ENST00000524330 ZMYM4Q5VZL5 1548 aa14.03□□□□□ -0.16
VPS13B-212ENST00000524330 LMTK2Q8IWU2 1503 aa14.03□□□□□ -0.16
VPS13B-212ENST00000524330 UHRF1BP1Q6BDS2 1440 aa14.02□□□□□ -0.16
VPS13B-212ENST00000524330 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
VPS13B-212ENST00000524330 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
VPS13B-212ENST00000524330 TRPM2O94759 1503 aa14□□□□□ -0.17
VPS13B-212ENST00000524330 TSPOAP1O95153 1857 aa14□□□□□ -0.17
VPS13B-212ENST00000524330 SPHKAPQ2M3C7 1700 aa14□□□□□ -0.17
VPS13B-212ENST00000524330 E9PCH4 1651 aa14□□□□□ -0.17
VPS13B-212ENST00000524330 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
VPS13B-212ENST00000524330 PTPRTO14522 1441 aa13.99□□□□□ -0.17
VPS13B-212ENST00000524330 DCAF11Q8TEB1 546 aa13.99□□□□□ -0.17
VPS13B-212ENST00000524330 WASHC2CQ9Y4E1 1318 aa13.98□□□□□ -0.17
VPS13B-212ENST00000524330 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
VPS13B-212ENST00000524330 GGT6Q6P531 493 aa13.98□□□□□ -0.17
VPS13B-212ENST00000524330 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
VPS13B-212ENST00000524330 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
VPS13B-212ENST00000524330 HSPA5P11021 654 aaKnown RBP13.97□□□□□ -0.17
VPS13B-212ENST00000524330 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
VPS13B-212ENST00000524330 ZC3H13Q5T200 1668 aaKnown RBP13.97□□□□□ -0.17
VPS13B-212ENST00000524330 PPRC1Q5VV67 1664 aaKnown RBP13.97□□□□□ -0.17
VPS13B-212ENST00000524330 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
VPS13B-212ENST00000524330 KIF13AQ9H1H9 1805 aa13.97□□□□□ -0.17
VPS13B-212ENST00000524330 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.17
VPS13B-212ENST00000524330 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
VPS13B-212ENST00000524330 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.18
VPS13B-212ENST00000524330 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.18
VPS13B-212ENST00000524330 REREQ9P2R6 1566 aa13.96□□□□□ -0.18
VPS13B-212ENST00000524330 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
VPS13B-212ENST00000524330 CEP152O94986 1710 aa13.94□□□□□ -0.18
VPS13B-212ENST00000524330 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
VPS13B-212ENST00000524330 CNTLNQ9NXG0 1405 aa13.93□□□□□ -0.18
VPS13B-212ENST00000524330 CARD11Q9BXL7 1154 aa13.93□□□□□ -0.18
VPS13B-212ENST00000524330 AGLP35573 1532 aa13.92□□□□□ -0.18
VPS13B-212ENST00000524330 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
VPS13B-212ENST00000524330 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
VPS13B-212ENST00000524330 ABCC3O15438 1527 aa13.91□□□□□ -0.18
VPS13B-212ENST00000524330 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
VPS13B-212ENST00000524330 KIF1BO60333 1816 aa13.91□□□□□ -0.18
VPS13B-212ENST00000524330 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
VPS13B-212ENST00000524330 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 ANP32CO43423 234 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 MIER1Q8N108 512 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 USP47Q96K76 1375 aa13.9□□□□□ -0.18
VPS13B-212ENST00000524330 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.19
VPS13B-212ENST00000524330 CENPBP07199 599 aaPredicted RBP13.89□□□□□ -0.19
VPS13B-212ENST00000524330 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
VPS13B-212ENST00000524330 ESF1Q9H501 851 aaKnown RBP13.89□□□□□ -0.19
VPS13B-212ENST00000524330 CLTCL1P53675 1640 aa13.89□□□□□ -0.19
VPS13B-212ENST00000524330 LAMC1P11047 1609 aa13.88□□□□□ -0.19
VPS13B-212ENST00000524330 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
VPS13B-212ENST00000524330 ARHGEF40Q8TER5 1519 aa13.87□□□□□ -0.19
VPS13B-212ENST00000524330 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
VPS13B-212ENST00000524330 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
VPS13B-212ENST00000524330 NPATQ14207 1427 aa13.86□□□□□ -0.19
VPS13B-212ENST00000524330 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
VPS13B-212ENST00000524330 POLR1AO95602 1720 aaPredicted RBP13.85□□□□□ -0.19
VPS13B-212ENST00000524330 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
VPS13B-212ENST00000524330 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
VPS13B-212ENST00000524330 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
VPS13B-212ENST00000524330 NOS1P29475 1434 aa13.83□□□□□ -0.2
VPS13B-212ENST00000524330 MYOM2P54296 1465 aa13.83□□□□□ -0.2
VPS13B-212ENST00000524330 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
VPS13B-212ENST00000524330 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
VPS13B-212ENST00000524330 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
VPS13B-212ENST00000524330 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
VPS13B-212ENST00000524330 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
VPS13B-212ENST00000524330 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
VPS13B-212ENST00000524330 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
VPS13B-212ENST00000524330 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
VPS13B-212ENST00000524330 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
VPS13B-212ENST00000524330 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
VPS13B-212ENST00000524330 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
VPS13B-212ENST00000524330 COL17A1Q9UMD9 1497 aaPredicted RBP13.77□□□□□ -0.21
VPS13B-212ENST00000524330 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
VPS13B-212ENST00000524330 PREX1Q8TCU6 1659 aa13.76□□□□□ -0.21
VPS13B-212ENST00000524330 PIK3C2BO00750 1634 aa13.76□□□□□ -0.21
VPS13B-212ENST00000524330 TMF1P82094 1093 aa13.76□□□□□ -0.21
VPS13B-212ENST00000524330 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
VPS13B-212ENST00000524330 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms