RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 RTEL1-TNFRSF6BF6WH68 1400 aa31.81■■■□□ 2.68
NKX6-3-202ENST00000524115 ESF1Q9H501 851 aaKnown RBP31.8■■■□□ 2.68
NKX6-3-202ENST00000524115 A2MP01023 1474 aa31.8■■■□□ 2.68
NKX6-3-202ENST00000524115 FER1L4A9Z1Z3 1794 aa31.79■■■□□ 2.68
NKX6-3-202ENST00000524115 CCDC141Q6ZP82 1450 aa31.79■■■□□ 2.68
NKX6-3-202ENST00000524115 DNMT1P26358 1616 aaKnown RBP31.79■■■□□ 2.68
NKX6-3-202ENST00000524115 DAPK1P53355 1430 aa31.78■■■□□ 2.68
NKX6-3-202ENST00000524115 RRP7BPQ9NSQ0 103 aa31.76■■■□□ 2.68
NKX6-3-202ENST00000524115 TSPY4P0CV99 314 aa31.76■■■□□ 2.67
NKX6-3-202ENST00000524115 TSPY10P0CW01 314 aa31.76■■■□□ 2.67
NKX6-3-202ENST00000524115 LMTK3Q96Q04 1460 aa31.73■■■□□ 2.67
NKX6-3-202ENST00000524115 PLXNC1O60486 1568 aa31.71■■■□□ 2.67
NKX6-3-202ENST00000524115 DHX29Q7Z478 1369 aaKnown RBP31.71■■■□□ 2.67
NKX6-3-202ENST00000524115 CHIC2Q9UKJ5 165 aa31.7■■■□□ 2.67
NKX6-3-202ENST00000524115 GGT6Q6P531 493 aa31.7■■■□□ 2.66
NKX6-3-202ENST00000524115 ARHGEF5Q12774 1597 aa31.69■■■□□ 2.66
NKX6-3-202ENST00000524115 TRIM52Q96A61 297 aa31.69■■■□□ 2.66
NKX6-3-202ENST00000524115 ABCC5O15440 1437 aa31.68■■■□□ 2.66
NKX6-3-202ENST00000524115 DDX10Q13206 875 aaKnown RBP31.68■■■□□ 2.66
NKX6-3-202ENST00000524115 CNTLNQ9NXG0 1405 aa31.68■■■□□ 2.66
NKX6-3-202ENST00000524115 CCER2I3L3R5 266 aa31.67■■■□□ 2.66
NKX6-3-202ENST00000524115 HSPA2P54652 639 aa31.67■■■□□ 2.66
NKX6-3-202ENST00000524115 MPHOSPH9Q99550 1183 aa31.65■■■□□ 2.66
NKX6-3-202ENST00000524115 PPP6R1Q9UPN7 881 aa31.62■■■□□ 2.65
NKX6-3-202ENST00000524115 ADGBQ8N7X0 1667 aa31.61■■■□□ 2.65
NKX6-3-202ENST00000524115 KIF3BO15066 747 aa31.61■■■□□ 2.65
NKX6-3-202ENST00000524115 ZMYM3Q14202 1370 aa31.61■■■□□ 2.65
NKX6-3-202ENST00000524115 ANP32CO43423 234 aa31.59■■■□□ 2.65
NKX6-3-202ENST00000524115 ADGRL2O95490 1459 aa31.55■■■□□ 2.64
NKX6-3-202ENST00000524115 UHRF1BP1Q6BDS2 1440 aa31.53■■■□□ 2.64
NKX6-3-202ENST00000524115 C3P01024 1663 aa31.53■■■□□ 2.64
NKX6-3-202ENST00000524115 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.63
NKX6-3-202ENST00000524115 ANKRD30BQ9BXX2 1392 aa31.49■■■□□ 2.63
NKX6-3-202ENST00000524115 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
NKX6-3-202ENST00000524115 NPATQ14207 1427 aa31.47■■■□□ 2.63
NKX6-3-202ENST00000524115 CROCC2H7BZ55 1655 aa31.47■■■□□ 2.63
NKX6-3-202ENST00000524115 PREX1Q8TCU6 1659 aa31.45■■■□□ 2.63
NKX6-3-202ENST00000524115 NCOA1Q15788 1441 aa31.44■■■□□ 2.62
NKX6-3-202ENST00000524115 WASHC2CQ9Y4E1 1318 aa31.44■■■□□ 2.62
NKX6-3-202ENST00000524115 MROH2AA6NES4 1674 aa31.44■■■□□ 2.62
NKX6-3-202ENST00000524115 ANKRD30AQ9BXX3 1397 aa31.44■■■□□ 2.62
NKX6-3-202ENST00000524115 SHANK2Q9UPX8 1470 aa31.43■■■□□ 2.62
NKX6-3-202ENST00000524115 SETD1BQ9UPS6 1966 aaKnown RBP31.43■■■□□ 2.62
NKX6-3-202ENST00000524115 CLTCQ00610 1675 aaKnown RBP31.43■■■□□ 2.62
NKX6-3-202ENST00000524115 EIF4G2P78344 907 aaKnown RBP eCLIP31.42■■■□□ 2.62
NKX6-3-202ENST00000524115 KIF15Q9NS87 1388 aa31.4■■■□□ 2.62
NKX6-3-202ENST00000524115 SLC4A1APQ9BWU0 796 aaKnown RBP31.38■■■□□ 2.61
NKX6-3-202ENST00000524115 HIRIP3Q9BW71 556 aaPredicted RBP31.38■■■□□ 2.61
NKX6-3-202ENST00000524115 DUOX2Q9NRD8 1548 aa31.36■■■□□ 2.61
NKX6-3-202ENST00000524115 L3MBTL2Q969R5 705 aa31.35■■■□□ 2.61
NKX6-3-202ENST00000524115 KDM5DQ9BY66 1539 aa31.34■■■□□ 2.61
NKX6-3-202ENST00000524115 HSPA5P11021 654 aaKnown RBP31.34■■■□□ 2.61
NKX6-3-202ENST00000524115 FBXO31Q5XUX0 539 aaPredicted RBP31.34■■■□□ 2.61
NKX6-3-202ENST00000524115 FAM135AQ9P2D6 1515 aa31.33■■■□□ 2.61
NKX6-3-202ENST00000524115 PZPP20742 1482 aa31.33■■■□□ 2.61
NKX6-3-202ENST00000524115 DMRT2Q9Y5R5 561 aa31.29■■■□□ 2.6
NKX6-3-202ENST00000524115 SUPT16HQ9Y5B9 1047 aaKnown RBP31.29■■■□□ 2.6
NKX6-3-202ENST00000524115 ERBINQ96RT1 1412 aa31.27■■■□□ 2.6
NKX6-3-202ENST00000524115 RNF17Q9BXT8 1623 aaKnown RBP31.26■■■□□ 2.59
NKX6-3-202ENST00000524115 EIF2AK4Q9P2K8 1649 aaKnown RBP31.26■■■□□ 2.59
NKX6-3-202ENST00000524115 ANKRD50Q9ULJ7 1429 aa31.25■■■□□ 2.59
NKX6-3-202ENST00000524115 ILDR1Q86SU0 546 aaPredicted RBP31.25■■■□□ 2.59
NKX6-3-202ENST00000524115 TNRQ92752 1358 aa31.24■■■□□ 2.59
NKX6-3-202ENST00000524115 ABCC3O15438 1527 aa31.22■■■□□ 2.59
NKX6-3-202ENST00000524115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.22■■■□□ 2.59
NKX6-3-202ENST00000524115 WASHC2AQ641Q2 1341 aa31.21■■■□□ 2.59
NKX6-3-202ENST00000524115 FOXD1Q16676 465 aa31.2■■■□□ 2.59
NKX6-3-202ENST00000524115 MROH1Q8NDA8 1641 aa31.2■■■□□ 2.59
NKX6-3-202ENST00000524115 STRCQ7RTU9 1775 aa31.18■■■□□ 2.58
NKX6-3-202ENST00000524115 MYO3AQ8NEV4 1616 aa31.17■■■□□ 2.58
NKX6-3-202ENST00000524115 CEP170BQ9Y4F5 1589 aaPredicted RBP31.16■■■□□ 2.58
NKX6-3-202ENST00000524115 CAMSAP1Q5T5Y3 1602 aa31.16■■■□□ 2.58
NKX6-3-202ENST00000524115 A2ML1A8K2U0 1454 aa31.16■■■□□ 2.58
NKX6-3-202ENST00000524115 NCKAP5LQ9HCH0 1330 aa31.15■■■□□ 2.58
NKX6-3-202ENST00000524115 PTPRTO14522 1441 aa31.15■■■□□ 2.58
NKX6-3-202ENST00000524115 CCDC7Q96M83 1385 aa31.14■■■□□ 2.58
NKX6-3-202ENST00000524115 POLR1AO95602 1720 aaPredicted RBP31.12■■■□□ 2.57
NKX6-3-202ENST00000524115 KANK1Q14678 1352 aa31.12■■■□□ 2.57
NKX6-3-202ENST00000524115 SPATA31E1Q6ZUB1 1445 aa31.11■■■□□ 2.57
NKX6-3-202ENST00000524115 PRDM15P57071 1507 aaPredicted RBP31.11■■■□□ 2.57
NKX6-3-202ENST00000524115 PKD2Q13563 968 aa31.1■■■□□ 2.57
NKX6-3-202ENST00000524115 ZC3H13Q5T200 1668 aaKnown RBP31.1■■■□□ 2.57
NKX6-3-202ENST00000524115 NBPF8Q3BBV2 869 aa31.09■■■□□ 2.57
NKX6-3-202ENST00000524115 ZNF142P52746 1687 aaPredicted RBP31.09■■■□□ 2.57
NKX6-3-202ENST00000524115 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
NKX6-3-202ENST00000524115 NLRP1Q9C000 1473 aa31.07■■■□□ 2.56
NKX6-3-202ENST00000524115 CERKQ8TCT0 537 aa31.06■■■□□ 2.56
NKX6-3-202ENST00000524115 FBXO41Q8TF61 875 aa31.06■■■□□ 2.56
NKX6-3-202ENST00000524115 ARHGAP31Q2M1Z3 1444 aa31.06■■■□□ 2.56
NKX6-3-202ENST00000524115 ERVK-7P63135 1459 aa31.06■■■□□ 2.56
NKX6-3-202ENST00000524115 THEMISQ8N1K5 641 aaPredicted RBP31.06■■■□□ 2.56
NKX6-3-202ENST00000524115 NUP155O75694 1391 aa31.04■■■□□ 2.56
NKX6-3-202ENST00000524115 NEFLP07196 543 aa31.04■■■□□ 2.56
NKX6-3-202ENST00000524115 SPATA31D1Q6ZQQ2 1576 aa31.04■■■□□ 2.56
NKX6-3-202ENST00000524115 DEPDC5O75140 1603 aa31.03■■■□□ 2.56
NKX6-3-202ENST00000524115 CEP152O94986 1710 aa31.01■■■□□ 2.55
NKX6-3-202ENST00000524115 LMTK2Q8IWU2 1503 aa30.98■■■□□ 2.55
NKX6-3-202ENST00000524115 VWDEQ8N2E2 1590 aa30.98■■■□□ 2.55
NKX6-3-202ENST00000524115 ANKLE2Q86XL3 938 aa30.97■■■□□ 2.55
NKX6-3-202ENST00000524115 UGGT1Q9NYU2 1555 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms