RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 MYT1LQ9UL68 1186 aa29.78■■■□□ 2.36
SQLE-206ENST00000523430 EIF2AK4Q9P2K8 1649 aaKnown RBP29.78■■■□□ 2.36
SQLE-206ENST00000523430 MLH3Q9UHC1 1453 aa29.74■■■□□ 2.35
SQLE-206ENST00000523430 DHX29Q7Z478 1369 aaKnown RBP29.73■■■□□ 2.35
SQLE-206ENST00000523430 FAM69CQ0P6D2 419 aa29.73■■■□□ 2.35
SQLE-206ENST00000523430 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
SQLE-206ENST00000523430 ABCA6Q8N139 1617 aa29.71■■■□□ 2.35
SQLE-206ENST00000523430 MROH1Q8NDA8 1641 aa29.71■■■□□ 2.35
SQLE-206ENST00000523430 PPRC1Q5VV67 1664 aaKnown RBP29.7■■■□□ 2.35
SQLE-206ENST00000523430 FRMPD1Q5SYB0 1578 aa29.69■■■□□ 2.34
SQLE-206ENST00000523430 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
SQLE-206ENST00000523430 PLA2R1Q13018 1463 aa29.68■■■□□ 2.34
SQLE-206ENST00000523430 A2MP01023 1474 aa29.68■■■□□ 2.34
SQLE-206ENST00000523430 VWDEQ8N2E2 1590 aa29.68■■■□□ 2.34
SQLE-206ENST00000523430 RAPGEF3O95398 923 aa29.68■■■□□ 2.34
SQLE-206ENST00000523430 TSPOAP1O95153 1857 aa29.66■■■□□ 2.34
SQLE-206ENST00000523430 E9PCH4 1651 aa29.65■■■□□ 2.34
SQLE-206ENST00000523430 KIF3BO15066 747 aa29.63■■■□□ 2.33
SQLE-206ENST00000523430 TET3O43151 1660 aa29.63■■■□□ 2.33
SQLE-206ENST00000523430 CCDC144AA2RUR9 1427 aa29.62■■■□□ 2.33
SQLE-206ENST00000523430 NBPF8Q3BBV2 869 aa29.62■■■□□ 2.33
SQLE-206ENST00000523430 RNF17Q9BXT8 1623 aaKnown RBP29.62■■■□□ 2.33
SQLE-206ENST00000523430 HIRIP3Q9BW71 556 aaPredicted RBP29.61■■■□□ 2.33
SQLE-206ENST00000523430 KIF13AQ9H1H9 1805 aa29.61■■■□□ 2.33
SQLE-206ENST00000523430 DIP2CQ9Y2E4 1556 aa29.61■■■□□ 2.33
SQLE-206ENST00000523430 ATP10AO60312 1499 aa29.6■■■□□ 2.33
SQLE-206ENST00000523430 KANK1Q14678 1352 aa29.58■■■□□ 2.33
SQLE-206ENST00000523430 BCORL1Q5H9F3 1711 aa29.56■■■□□ 2.32
SQLE-206ENST00000523430 SPHKAPQ2M3C7 1700 aa29.53■■■□□ 2.32
SQLE-206ENST00000523430 ZMYM4Q5VZL5 1548 aa29.53■■■□□ 2.32
SQLE-206ENST00000523430 TRPM2O94759 1503 aa29.52■■■□□ 2.32
SQLE-206ENST00000523430 YEATS2Q9ULM3 1422 aa29.51■■■□□ 2.32
SQLE-206ENST00000523430 CEP152O94986 1710 aa29.51■■■□□ 2.32
SQLE-206ENST00000523430 EFCAB6Q5THR3 1501 aa29.51■■■□□ 2.31
SQLE-206ENST00000523430 UHRF1BP1Q6BDS2 1440 aa29.5■■■□□ 2.31
SQLE-206ENST00000523430 LMTK2Q8IWU2 1503 aa29.48■■■□□ 2.31
SQLE-206ENST00000523430 MIER1Q8N108 512 aa29.48■■■□□ 2.31
SQLE-206ENST00000523430 PTPRTO14522 1441 aa29.47■■■□□ 2.31
SQLE-206ENST00000523430 ZNF326Q5BKZ1 582 aaKnown RBP29.46■■■□□ 2.31
SQLE-206ENST00000523430 HSPA5P11021 654 aaKnown RBP29.46■■■□□ 2.31
SQLE-206ENST00000523430 CLTCL1P53675 1640 aa29.45■■■□□ 2.3
SQLE-206ENST00000523430 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
SQLE-206ENST00000523430 EIF4G2P78344 907 aaKnown RBP eCLIP29.42■■■□□ 2.3
SQLE-206ENST00000523430 DCAF11Q8TEB1 546 aa29.42■■■□□ 2.3
SQLE-206ENST00000523430 KDM2AQ9Y2K7 1162 aa29.4■■■□□ 2.3
SQLE-206ENST00000523430 ABCC3O15438 1527 aa29.39■■■□□ 2.3
SQLE-206ENST00000523430 RGL3Q3MIN7 710 aa29.38■■■□□ 2.29
SQLE-206ENST00000523430 GGT6Q6P531 493 aa29.38■■■□□ 2.29
SQLE-206ENST00000523430 SPATA31E1Q6ZUB1 1445 aa29.38■■■□□ 2.29
SQLE-206ENST00000523430 UGGT1Q9NYU2 1555 aa29.35■■■□□ 2.29
SQLE-206ENST00000523430 PRAG1Q86YV5 1406 aa29.35■■■□□ 2.29
SQLE-206ENST00000523430 DDX10Q13206 875 aaKnown RBP29.35■■■□□ 2.29
SQLE-206ENST00000523430 CAMSAP1Q5T5Y3 1602 aa29.34■■■□□ 2.29
SQLE-206ENST00000523430 COL17A1Q9UMD9 1497 aaPredicted RBP29.34■■■□□ 2.29
SQLE-206ENST00000523430 TRPM1Q7Z4N2 1603 aa29.32■■■□□ 2.28
SQLE-206ENST00000523430 NPATQ14207 1427 aa29.32■■■□□ 2.28
SQLE-206ENST00000523430 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
SQLE-206ENST00000523430 USP47Q96K76 1375 aa29.29■■■□□ 2.28
SQLE-206ENST00000523430 REREQ9P2R6 1566 aa29.29■■■□□ 2.28
SQLE-206ENST00000523430 WASHC2CQ9Y4E1 1318 aa29.28■■■□□ 2.28
SQLE-206ENST00000523430 WASHC2AQ641Q2 1341 aa29.26■■■□□ 2.27
SQLE-206ENST00000523430 ARHGEF40Q8TER5 1519 aa29.26■■■□□ 2.27
SQLE-206ENST00000523430 SIGLEC1Q9BZZ2 1709 aa29.25■■■□□ 2.27
SQLE-206ENST00000523430 NEURL4Q96JN8 1562 aa29.24■■■□□ 2.27
SQLE-206ENST00000523430 MROH2AA6NES4 1674 aa29.23■■■□□ 2.27
SQLE-206ENST00000523430 MADDQ8WXG6 1647 aa29.22■■■□□ 2.27
SQLE-206ENST00000523430 ROCK2O75116 1388 aaKnown RBP29.22■■■□□ 2.27
SQLE-206ENST00000523430 CARD11Q9BXL7 1154 aa29.21■■■□□ 2.27
SQLE-206ENST00000523430 POLR1AO95602 1720 aaPredicted RBP29.21■■■□□ 2.27
SQLE-206ENST00000523430 KIF1BO60333 1816 aa29.2■■■□□ 2.27
SQLE-206ENST00000523430 C11orf95C9JLR9 678 aaPredicted RBP29.2■■■□□ 2.26
SQLE-206ENST00000523430 AGLP35573 1532 aa29.19■■■□□ 2.26
SQLE-206ENST00000523430 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
SQLE-206ENST00000523430 CCDC7Q96M83 1385 aa29.17■■■□□ 2.26
SQLE-206ENST00000523430 ADGRB3O60242 1522 aa29.17■■■□□ 2.26
SQLE-206ENST00000523430 LAMC1P11047 1609 aa29.16■■■□□ 2.26
SQLE-206ENST00000523430 CFAP65Q6ZU64 1925 aaKnown RBP29.15■■■□□ 2.26
SQLE-206ENST00000523430 SYNMO15061 1565 aa29.15■■■□□ 2.26
SQLE-206ENST00000523430 GPRASP1Q5JY77 1395 aa29.14■■■□□ 2.26
SQLE-206ENST00000523430 NOS1P29475 1434 aa29.14■■■□□ 2.26
SQLE-206ENST00000523430 ARHGAP31Q2M1Z3 1444 aa29.14■■■□□ 2.26
SQLE-206ENST00000523430 IFT172Q9UG01 1749 aa29.13■■■□□ 2.25
SQLE-206ENST00000523430 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
SQLE-206ENST00000523430 PIK3C2BO00750 1634 aa29.11■■■□□ 2.25
SQLE-206ENST00000523430 KIF7Q2M1P5 1343 aa29.11■■■□□ 2.25
SQLE-206ENST00000523430 MYOM2P54296 1465 aa29.08■■■□□ 2.25
SQLE-206ENST00000523430 PREX1Q8TCU6 1659 aa29.07■■■□□ 2.24
SQLE-206ENST00000523430 CLTCQ00610 1675 aaKnown RBP29.05■■■□□ 2.24
SQLE-206ENST00000523430 ST20-MTHFSA0A0A6YYL1 179 aa29.04■■■□□ 2.24
SQLE-206ENST00000523430 YTHDC1Q96MU7 727 aaKnown RBP29.03■■■□□ 2.24
SQLE-206ENST00000523430 STAC3Q96MF2 364 aa29.02■■■□□ 2.24
SQLE-206ENST00000523430 CHGAP10645 457 aaKnown RBP29■■■□□ 2.23
SQLE-206ENST00000523430 PPLO60437 1756 aa29■■■□□ 2.23
SQLE-206ENST00000523430 KIAA1210Q9ULL0 1709 aa28.99■■■□□ 2.23
SQLE-206ENST00000523430 IQGAP1P46940 1657 aa28.99■■■□□ 2.23
SQLE-206ENST00000523430 NRXN1Q9ULB1 1477 aa28.98■■■□□ 2.23
SQLE-206ENST00000523430 ANP32CO43423 234 aa28.97■■■□□ 2.23
SQLE-206ENST00000523430 MLECQ14165 292 aa28.96■■■□□ 2.23
SQLE-206ENST00000523430 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
SQLE-206ENST00000523430 ERVK-7P63135 1459 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms